BLASTX nr result
ID: Coptis24_contig00019221
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00019221
(1558 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI15366.3| unnamed protein product [Vitis vinifera] 602 e-170
ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containi... 602 e-170
ref|XP_003528249.1| PREDICTED: pentatricopeptide repeat-containi... 555 e-155
ref|XP_002322051.1| predicted protein [Populus trichocarpa] gi|2... 554 e-155
ref|XP_003595674.1| Pentatricopeptide repeat protein [Medicago t... 547 e-153
>emb|CBI15366.3| unnamed protein product [Vitis vinifera]
Length = 783
Score = 602 bits (1552), Expect = e-170
Identities = 280/410 (68%), Positives = 344/410 (83%)
Frame = -2
Query: 1551 KNLVCWNAMIAGFSQNGFPDKAIDLFRRMQCVRLQPLEIAVVSVLSACAQLAALRLGKEI 1372
++LV WN MIAG+SQNG PD+AI+LFR+M +QP EIA++ V AC+QL+ALRLGKE+
Sbjct: 374 RSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKEL 433
Query: 1371 HCFALKAELTEDAFVSSSIIDMYAKSGCIEQSWRVFGRLREKDMVSWTVMIAGYGVHGRG 1192
HCFALKA LTED FVSSSIIDMYAK GCI S R+F RLREKD+ SW V+IAGYG+HGRG
Sbjct: 434 HCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRG 493
Query: 1191 KDAIELFERMQSEGLKPDAFTFISLLMACSHSGLVGEGLKYFSEMRTKNYIEPKLEHYAC 1012
K+A+ELFE+M GLKPD FTF +LMACSH+GLV +GL+YF++M + IEPKLEHY C
Sbjct: 494 KEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTC 553
Query: 1011 MVDMLGRAGHLNHALNLLEEMPEKPDAGIWGALLSSCKTHGDVVLGQKVSEILLDLEPYK 832
+VDMLGRAG ++ AL L+EEMP PD+ IW +LLSSC+ HG++ LG+KV+ LL+LEP K
Sbjct: 554 VVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEK 613
Query: 831 AENYVLVSNLFAKAGRWEDVRRVRGRMKEMGLKKDIGCSWIEVEGKIYNFIVGDKTLPDS 652
ENYVL+SNLFA +G+W+DVRRVRGRMK++GL+KD GCSWIEV GK++NF++GD+ LP+
Sbjct: 614 PENYVLISNLFAGSGKWDDVRRVRGRMKDIGLQKDAGCSWIEVGGKVHNFLIGDEMLPEL 673
Query: 651 EEIRQMWQELEHKIGEIGYVPDTGSVLHDLDEQEKADILRGHSEKLAIAFGLLKTTKGMT 472
EE+R+ W+ LE KI IGY PDTGSVLHDL+E++K ILRGHSEKLAI+FGLL T KG+
Sbjct: 674 EEVRETWRRLEVKISSIGYTPDTGSVLHDLEEEDKIGILRGHSEKLAISFGLLNTAKGLP 733
Query: 471 VRICKNLRMCADCHNAAKLVSKVVHRDIIVRDNKRFHHFSAGICSCGDYW 322
VR+ KNLR+C DCHNAAK +SKVV+RDI+VRDNKRFHHF GICSCGDYW
Sbjct: 734 VRVYKNLRICGDCHNAAKFISKVVNRDIVVRDNKRFHHFRDGICSCGDYW 783
Score = 103 bits (256), Expect = 2e-19
Identities = 57/154 (37%), Positives = 89/154 (57%), Gaps = 2/154 (1%)
Frame = -2
Query: 1557 RDKNLVCWNAMIAGFSQNGFPDKAIDLFRRMQCV-RLQPLEIAVVSVLSACAQLAALRLG 1381
R KNL WNA+++ +++N + A+ +F + V +P + V+ ACA L L LG
Sbjct: 168 RRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLG 227
Query: 1380 KEIHCFALKAELTEDAFVSSSIIDMYAKSGCIEQSW-RVFGRLREKDMVSWTVMIAGYGV 1204
+ IH A K +L D FV +++I MY K G +E++ RVF + K + SW ++ GY
Sbjct: 228 QIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKRVFDLMDTKTVSSWNALLCGYAQ 287
Query: 1203 HGRGKDAIELFERMQSEGLKPDAFTFISLLMACS 1102
+ + A++L+ +M GL PD FT SLL+ACS
Sbjct: 288 NSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACS 321
>ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein At1g18485-like
[Vitis vinifera]
Length = 881
Score = 602 bits (1552), Expect = e-170
Identities = 280/410 (68%), Positives = 344/410 (83%)
Frame = -2
Query: 1551 KNLVCWNAMIAGFSQNGFPDKAIDLFRRMQCVRLQPLEIAVVSVLSACAQLAALRLGKEI 1372
++LV WN MIAG+SQNG PD+AI+LFR+M +QP EIA++ V AC+QL+ALRLGKE+
Sbjct: 472 RSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKEL 531
Query: 1371 HCFALKAELTEDAFVSSSIIDMYAKSGCIEQSWRVFGRLREKDMVSWTVMIAGYGVHGRG 1192
HCFALKA LTED FVSSSIIDMYAK GCI S R+F RLREKD+ SW V+IAGYG+HGRG
Sbjct: 532 HCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRG 591
Query: 1191 KDAIELFERMQSEGLKPDAFTFISLLMACSHSGLVGEGLKYFSEMRTKNYIEPKLEHYAC 1012
K+A+ELFE+M GLKPD FTF +LMACSH+GLV +GL+YF++M + IEPKLEHY C
Sbjct: 592 KEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTC 651
Query: 1011 MVDMLGRAGHLNHALNLLEEMPEKPDAGIWGALLSSCKTHGDVVLGQKVSEILLDLEPYK 832
+VDMLGRAG ++ AL L+EEMP PD+ IW +LLSSC+ HG++ LG+KV+ LL+LEP K
Sbjct: 652 VVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEK 711
Query: 831 AENYVLVSNLFAKAGRWEDVRRVRGRMKEMGLKKDIGCSWIEVEGKIYNFIVGDKTLPDS 652
ENYVL+SNLFA +G+W+DVRRVRGRMK++GL+KD GCSWIEV GK++NF++GD+ LP+
Sbjct: 712 PENYVLISNLFAGSGKWDDVRRVRGRMKDIGLQKDAGCSWIEVGGKVHNFLIGDEMLPEL 771
Query: 651 EEIRQMWQELEHKIGEIGYVPDTGSVLHDLDEQEKADILRGHSEKLAIAFGLLKTTKGMT 472
EE+R+ W+ LE KI IGY PDTGSVLHDL+E++K ILRGHSEKLAI+FGLL T KG+
Sbjct: 772 EEVRETWRRLEVKISSIGYTPDTGSVLHDLEEEDKIGILRGHSEKLAISFGLLNTAKGLP 831
Query: 471 VRICKNLRMCADCHNAAKLVSKVVHRDIIVRDNKRFHHFSAGICSCGDYW 322
VR+ KNLR+C DCHNAAK +SKVV+RDI+VRDNKRFHHF GICSCGDYW
Sbjct: 832 VRVYKNLRICGDCHNAAKFISKVVNRDIVVRDNKRFHHFRDGICSCGDYW 881
Score = 102 bits (255), Expect = 2e-19
Identities = 64/228 (28%), Positives = 116/228 (50%), Gaps = 3/228 (1%)
Frame = -2
Query: 1557 RDKNLVCWNAMIAGFSQNGFPDKAIDLFRRMQCV-RLQPLEIAVVSVLSACAQLAALRLG 1381
R KNL WNA+++ +++N + A+ +F + V +P + V+ ACA L L LG
Sbjct: 61 RRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLG 120
Query: 1380 KEIHCFALKAELTEDAFVSSSIIDMYAKSGCIEQSWRVFGRLREKDMVSWTVMIAGYGVH 1201
+ IH A K +L D FV +++I MY K G +E++ +VF + E+++VSW +I G+ +
Sbjct: 121 QIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSEN 180
Query: 1200 GRGKDAIELFERM--QSEGLKPDAFTFISLLMACSHSGLVGEGLKYFSEMRTKNYIEPKL 1027
G +++ F M E PD T +++L C+ + +G+ + K + +L
Sbjct: 181 GFLQESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHG-LAVKLGLNEEL 239
Query: 1026 EHYACMVDMLGRAGHLNHALNLLEEMPEKPDAGIWGALLSSCKTHGDV 883
++DM + L+ A LL + +K + W +++ DV
Sbjct: 240 MVNNSLIDMYSKCRFLSEA-QLLFDKNDKKNIVSWNSMIGGYAREEDV 286
Score = 92.0 bits (227), Expect = 4e-16
Identities = 48/152 (31%), Positives = 86/152 (56%), Gaps = 2/152 (1%)
Frame = -2
Query: 1551 KNLVCWNAMIAGFSQNGFPDKAIDLFRRMQC--VRLQPLEIAVVSVLSACAQLAALRLGK 1378
KN+V WN+MI G+++ + L ++MQ +++ E +++VL C + + L+ K
Sbjct: 268 KNIVSWNSMIGGYAREEDVCRTFYLLQKMQTEDAKMKADEFTILNVLPVCLERSELQSLK 327
Query: 1377 EIHCFALKAELTEDAFVSSSIIDMYAKSGCIEQSWRVFGRLREKDMVSWTVMIAGYGVHG 1198
E+H ++ + L + V+++ I Y + G + S RVF + K + SW ++ GY +
Sbjct: 328 ELHGYSWRHGLQSNELVANAFIAAYTRCGALCSSERVFDLMDTKTVSSWNALLCGYAQNS 387
Query: 1197 RGKDAIELFERMQSEGLKPDAFTFISLLMACS 1102
+ A++L+ +M GL PD FT SLL+ACS
Sbjct: 388 DPRKALDLYLQMTDSGLDPDWFTIGSLLLACS 419
>ref|XP_003528249.1| PREDICTED: pentatricopeptide repeat-containing protein At1g18485-like
[Glycine max]
Length = 975
Score = 555 bits (1430), Expect = e-155
Identities = 257/411 (62%), Positives = 331/411 (80%)
Frame = -2
Query: 1554 DKNLVCWNAMIAGFSQNGFPDKAIDLFRRMQCVRLQPLEIAVVSVLSACAQLAALRLGKE 1375
+K+LVCWN MI GFSQN P +A+D FR+M ++P EIAV VL AC+Q++ALRLGKE
Sbjct: 565 NKSLVCWNVMITGFSQNELPCEALDTFRQMLSGGIKPQEIAVTGVLGACSQVSALRLGKE 624
Query: 1374 IHCFALKAELTEDAFVSSSIIDMYAKSGCIEQSWRVFGRLREKDMVSWTVMIAGYGVHGR 1195
+H FALKA L+EDAFV+ ++IDMYAK GC+EQS +F R+ EKD W V+IAGYG+HG
Sbjct: 625 VHSFALKAHLSEDAFVTCALIDMYAKCGCMEQSQNIFDRVNEKDEAVWNVIIAGYGIHGH 684
Query: 1194 GKDAIELFERMQSEGLKPDAFTFISLLMACSHSGLVGEGLKYFSEMRTKNYIEPKLEHYA 1015
G AIELFE MQ++G +PD+FTF+ +L+AC+H+GLV EGLKY +M+ ++PKLEHYA
Sbjct: 685 GLKAIELFELMQNKGGRPDSFTFLGVLIACNHAGLVTEGLKYLGQMQNLYGVKPKLEHYA 744
Query: 1014 CMVDMLGRAGHLNHALNLLEEMPEKPDAGIWGALLSSCKTHGDVVLGQKVSEILLDLEPY 835
C+VDMLGRAG L AL L+ EMP++PD+GIW +LLSSC+ +GD+ +G++VS+ LL+LEP
Sbjct: 745 CVVDMLGRAGQLTEALKLVNEMPDEPDSGIWSSLLSSCRNYGDLEIGEEVSKKLLELEPN 804
Query: 834 KAENYVLVSNLFAKAGRWEDVRRVRGRMKEMGLKKDIGCSWIEVEGKIYNFIVGDKTLPD 655
KAENYVL+SNL+A G+W++VR+VR RMKE GL KD GCSWIE+ G +Y F+V D +L +
Sbjct: 805 KAENYVLLSNLYAGLGKWDEVRKVRQRMKENGLHKDAGCSWIEIGGMVYRFLVSDGSLSE 864
Query: 654 SEEIRQMWQELEHKIGEIGYVPDTGSVLHDLDEQEKADILRGHSEKLAIAFGLLKTTKGM 475
S++I+Q W +LE KI +IGY PDT VLH+L+E+ K IL+ HSEKLAI+FGLL T KG
Sbjct: 865 SKKIQQTWIKLEKKISKIGYKPDTSCVLHELEEEGKIKILKSHSEKLAISFGLLNTAKGT 924
Query: 474 TVRICKNLRMCADCHNAAKLVSKVVHRDIIVRDNKRFHHFSAGICSCGDYW 322
T+R+CKNLR+C DCHNA KLVSKVV RDIIVRDNKRFHHF G+C+CGD+W
Sbjct: 925 TLRVCKNLRICVDCHNAIKLVSKVVKRDIIVRDNKRFHHFKNGLCTCGDFW 975
Score = 124 bits (310), Expect = 9e-26
Identities = 69/233 (29%), Positives = 117/233 (50%)
Frame = -2
Query: 1551 KNLVCWNAMIAGFSQNGFPDKAIDLFRRMQCVRLQPLEIAVVSVLSACAQLAALRLGKEI 1372
K + WNA+I +QNGFP K++DLF M + P + S+L ACA+L LR GKEI
Sbjct: 465 KTVSSWNALIGAHAQNGFPGKSLDLFLVMMDSGMDPDRFTIGSLLLACARLKFLRCGKEI 524
Query: 1371 HCFALKAELTEDAFVSSSIIDMYAKSGCIEQSWRVFGRLREKDMVSWTVMIAGYGVHGRG 1192
H F L+ L D F+ S++ +Y + + +F ++ K +V W VMI G+ +
Sbjct: 525 HGFMLRNGLELDEFIGISLMSLYIQCSSMLLGKLIFDKMENKSLVCWNVMITGFSQNELP 584
Query: 1191 KDAIELFERMQSEGLKPDAFTFISLLMACSHSGLVGEGLKYFSEMRTKNYIEPKLEHYAC 1012
+A++ F +M S G+KP +L ACS + G K K ++
Sbjct: 585 CEALDTFRQMLSGGIKPQEIAVTGVLGACSQVSALRLG-KEVHSFALKAHLSEDAFVTCA 643
Query: 1011 MVDMLGRAGHLNHALNLLEEMPEKPDAGIWGALLSSCKTHGDVVLGQKVSEIL 853
++DM + G + + N+ + + EK D +W +++ HG + ++ E++
Sbjct: 644 LIDMYAKCGCMEQSQNIFDRVNEK-DEAVWNVIIAGYGIHGHGLKAIELFELM 695
Score = 106 bits (264), Expect = 2e-20
Identities = 79/286 (27%), Positives = 141/286 (49%), Gaps = 9/286 (3%)
Frame = -2
Query: 1557 RDKNLVCWNAMIAGFSQNGFPDKAIDLFRRM-QCVRLQPLEIAVVSVLSACAQLAALRLG 1381
++K+L +NA+++G+S+N AI LF + L P + V ACA +A + LG
Sbjct: 155 KEKDLFLYNALLSGYSRNALFRDAISLFLELLSATDLAPDNFTLPCVAKACAGVADVELG 214
Query: 1380 KEIHCFALKAELTEDAFVSSSIIDMYAKSGCIEQSWRVFGRLREKDMVSWTVMIAGYGVH 1201
+ +H ALKA DAFV +++I MY K G +E + +VF +R +++VSW ++ +
Sbjct: 215 EAVHALALKAGGFSDAFVGNALIAMYGKCGFVESAVKVFETMRNRNLVSWNSVMYACSEN 274
Query: 1200 GRGKDAIELFERM---QSEGLKPDAFTFISLLMACSHSGLVGEGLKYFSEMRTKNYIEPK 1030
G + +F+R+ + EGL PD T ++++ AC+ G V G+ + K I +
Sbjct: 275 GGFGECCGVFKRLLISEEEGLVPDVATMVTVIPACAAVGEVRMGMVVHG-LAFKLGITEE 333
Query: 1029 LEHYACMVDMLGRAGHLNHALNLLEEMPEKPDAGIWGALLSSCKTHGDVVLGQKVSEILL 850
+ +VDM + G+L A L +M + W ++ GD + V E+L
Sbjct: 334 VTVNNSLVDMYSKCGYLGEA-RALFDMNGGKNVVSWNTIIWGYSKEGDF---RGVFELLQ 389
Query: 849 DL---EPYKAENYVLVSNLFAKAGRWE--DVRRVRGRMKEMGLKKD 727
++ E + +++ L A +G + ++ + G G KD
Sbjct: 390 EMQREEKVRVNEVTVLNVLPACSGEHQLLSLKEIHGYAFRHGFLKD 435
Score = 87.4 bits (215), Expect = 9e-15
Identities = 50/151 (33%), Positives = 84/151 (55%), Gaps = 1/151 (0%)
Frame = -2
Query: 1551 KNLVCWNAMIAGFSQNGFPDKAIDLFRRMQCV-RLQPLEIAVVSVLSACAQLAALRLGKE 1375
KN+V WN +I G+S+ G +L + MQ +++ E+ V++VL AC+ L KE
Sbjct: 363 KNVVSWNTIIWGYSKEGDFRGVFELLQEMQREEKVRVNEVTVLNVLPACSGEHQLLSLKE 422
Query: 1374 IHCFALKAELTEDAFVSSSIIDMYAKSGCIEQSWRVFGRLREKDMVSWTVMIAGYGVHGR 1195
IH +A + +D V+++ + YAK ++ + RVF + K + SW +I + +G
Sbjct: 423 IHGYAFRHGFLKDELVANAFVAAYAKCSSLDCAERVFCGMEGKTVSSWNALIGAHAQNGF 482
Query: 1194 GKDAIELFERMQSEGLKPDAFTFISLLMACS 1102
+++LF M G+ PD FT SLL+AC+
Sbjct: 483 PGKSLDLFLVMMDSGMDPDRFTIGSLLLACA 513
Score = 66.6 bits (161), Expect = 2e-08
Identities = 57/235 (24%), Positives = 93/235 (39%), Gaps = 38/235 (16%)
Frame = -2
Query: 1434 AVVSVLSACAQLAALRLGKEIHCFALKA-ELTEDAFVSSSIIDMYAKSGCIEQSWRVFGR 1258
A+ +L AC + +G+++H + +L D +S+ II MY+ G S VF
Sbjct: 94 AIGILLRACGHHKNIHVGRKVHALVSASHKLRNDVVLSTRIIAMYSACGSPSDSRGVFDA 153
Query: 1257 LREKDMVSWTVMIAGYGVHGRGKDAIELF-ERMQSEGLKPDAFTFISLLMACS------- 1102
+EKD+ + +++GY + +DAI LF E + + L PD FT + AC+
Sbjct: 154 AKEKDLFLYNALLSGYSRNALFRDAISLFLELLSATDLAPDNFTLPCVAKACAGVADVEL 213
Query: 1101 ----------------------------HSGLVGEGLKYFSEMRTKNYIEPKLEHYACMV 1006
G V +K F MR +N + YAC
Sbjct: 214 GEAVHALALKAGGFSDAFVGNALIAMYGKCGFVESAVKVFETMRNRNLVSWNSVMYACSE 273
Query: 1005 D-MLGRAGHLNHALNLLEEMPEKPDAGIWGALLSSCKTHGDVVLGQKVSEILLDL 844
+ G + L + EE PD ++ +C G+V +G V + L
Sbjct: 274 NGGFGECCGVFKRLLISEEEGLVPDVATMVTVIPACAAVGEVRMGMVVHGLAFKL 328
>ref|XP_002322051.1| predicted protein [Populus trichocarpa] gi|222869047|gb|EEF06178.1|
predicted protein [Populus trichocarpa]
Length = 924
Score = 554 bits (1428), Expect = e-155
Identities = 263/412 (63%), Positives = 329/412 (79%)
Frame = -2
Query: 1557 RDKNLVCWNAMIAGFSQNGFPDKAIDLFRRMQCVRLQPLEIAVVSVLSACAQLAALRLGK 1378
+DKNLV WNAMI+G+SQNG P +++ LFR+ +Q EIA+VSV AC+QL+ALRLGK
Sbjct: 513 KDKNLVSWNAMISGYSQNGLPYESLALFRKSLSEGIQSHEIAIVSVFGACSQLSALRLGK 572
Query: 1377 EIHCFALKAELTEDAFVSSSIIDMYAKSGCIEQSWRVFGRLREKDMVSWTVMIAGYGVHG 1198
E H + LKA TEDAFV SIIDMYAKSGCI++S +VF L++K++ SW +I +G+HG
Sbjct: 573 EAHGYVLKALQTEDAFVGCSIIDMYAKSGCIKESRKVFDGLKDKNVASWNAIIVAHGIHG 632
Query: 1197 RGKDAIELFERMQSEGLKPDAFTFISLLMACSHSGLVGEGLKYFSEMRTKNYIEPKLEHY 1018
GK+AIEL+ERM+ G PD FT+I +LMAC H+GLV EGLKYF EM+ N IEPKLEHY
Sbjct: 633 HGKEAIELYERMKKVGQMPDRFTYIGILMACGHAGLVEEGLKYFKEMQNFNLIEPKLEHY 692
Query: 1017 ACMVDMLGRAGHLNHALNLLEEMPEKPDAGIWGALLSSCKTHGDVVLGQKVSEILLDLEP 838
AC++DML RAG L+ AL L+ EMPE+ D IW +LL SC+T G + +G+KV++ LL+LEP
Sbjct: 693 ACLIDMLARAGRLDDALRLVNEMPEEADNRIWSSLLRSCRTFGALEIGEKVAKKLLELEP 752
Query: 837 YKAENYVLVSNLFAKAGRWEDVRRVRGRMKEMGLKKDIGCSWIEVEGKIYNFIVGDKTLP 658
KAENYVL+SNL+A G+W+ VRRVR MKE+GL+KD GCSWIEV G++Y+F+VGD P
Sbjct: 753 DKAENYVLLSNLYAGLGKWDGVRRVRQMMKEIGLQKDAGCSWIEVGGRVYSFVVGDSLQP 812
Query: 657 DSEEIRQMWQELEHKIGEIGYVPDTGSVLHDLDEQEKADILRGHSEKLAIAFGLLKTTKG 478
S EIR +W+ LE +I EIGY P+T SVLH++ E+EK DILRGHSEKLAI+FGLLKTTKG
Sbjct: 813 KSAEIRVIWRRLEERISEIGYKPNTSSVLHEVGEEEKIDILRGHSEKLAISFGLLKTTKG 872
Query: 477 MTVRICKNLRMCADCHNAAKLVSKVVHRDIIVRDNKRFHHFSAGICSCGDYW 322
T+RI KNLR+CADCHNAAKL+SK V R+I+VRDNKRFHHF G+CSC DYW
Sbjct: 873 TTLRIYKNLRICADCHNAAKLISKAVEREIVVRDNKRFHHFRDGLCSCCDYW 924
Score = 115 bits (288), Expect = 3e-23
Identities = 67/225 (29%), Positives = 116/225 (51%), Gaps = 2/225 (0%)
Frame = -2
Query: 1551 KNLVCWNAMIAGFSQNGFPDKAIDLFRRMQC-VRLQPLEIAVVSVLSACAQLAALRLGKE 1375
KNL+ WNA+++G+++NG + +F + QP SV+ AC + +RLG+
Sbjct: 108 KNLIQWNALVSGYTRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSVIKACGGILDVRLGEV 167
Query: 1374 IHCFALKAELTEDAFVSSSIIDMYAKSGCIEQSWRVFGRLREKDMVSWTVMIAGYGVHGR 1195
IH +K L D FV ++++ MY K G ++++ +VF + E ++VSW MI + +G
Sbjct: 168 IHGMVIKMGLVLDVFVGNALVGMYGKCGAVDEAMKVFDFMPETNLVSWNSMICAFSENGF 227
Query: 1194 GKDAIE-LFERMQSEGLKPDAFTFISLLMACSHSGLVGEGLKYFSEMRTKNYIEPKLEHY 1018
+D+ + L E + EGL PD T +++L C+ G V G+ + K + ++
Sbjct: 228 SRDSFDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEVDIGMGIHG-LAVKLGLSEEVMVN 286
Query: 1017 ACMVDMLGRAGHLNHALNLLEEMPEKPDAGIWGALLSSCKTHGDV 883
MV M + G+LN A + K + W ++S+ GDV
Sbjct: 287 NAMVYMYSKCGYLNEAQMSFVKNNNK-NVVSWNTMISAFSLEGDV 330
Score = 99.0 bits (245), Expect = 3e-18
Identities = 66/227 (29%), Positives = 116/227 (51%), Gaps = 5/227 (2%)
Frame = -2
Query: 1554 DKNLVCWNAMIAGFSQNGFPDKAIDLFRRMQCV--RLQPLEIAVVSVLSACAQLAALRLG 1381
+KN+V WN MI+ FS G ++A +L + MQ ++ E+ +++VL AC LR
Sbjct: 311 NKNVVSWNTMISAFSLEGDVNEAFNLLQEMQIQGEEMKANEVTILNVLPACLDKLQLRSL 370
Query: 1380 KEIHCFALKAELTEDAFVSSSIIDMYAKSGCIEQSWRVFGRLREKDMVSWTVMIAGYGVH 1201
KE+H ++ + + +S++ I YAK G + + +VF + +K + SW +I G+ +
Sbjct: 371 KELHGYSFR-HCFQHVELSNAFILAYAKCGALNSAEKVFHGIGDKTVSSWNALIGGHAQN 429
Query: 1200 GRGKDAIELFERMQSEGLKPDAFTFISLLMACSHSGLVGEGLKYFSEMR---TKNYIEPK 1030
G + A+ L +M G +PD FT SLL+AC+H + L+Y E+ +N +E
Sbjct: 430 GDPRKALHLLFQMTYSGQQPDWFTISSLLLACAHL----KSLQYGKEIHGYVLRNGLETD 485
Query: 1029 LEHYACMVDMLGRAGHLNHALNLLEEMPEKPDAGIWGALLSSCKTHG 889
++ G + A L + M +K + W A++S +G
Sbjct: 486 FFVGTSLLSHYIHCGKASSARVLFDRMKDK-NLVSWNAMISGYSQNG 531
Score = 98.2 bits (243), Expect = 5e-18
Identities = 66/226 (29%), Positives = 112/226 (49%), Gaps = 3/226 (1%)
Frame = -2
Query: 1554 DKNLVCWNAMIAGFSQNGFPDKAIDLFRRMQCVR-LQPLEIAVVSVLSACAQLAALRLGK 1378
+ NLV WN+MI FS+NGF + DL M L P + VV++L CA + +G
Sbjct: 209 ETNLVSWNSMICAFSENGFSRDSFDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEVDIGM 268
Query: 1377 EIHCFALKAELTEDAFVSSSIIDMYAKSGCIEQSWRVFGRLREKDMVSWTVMIAGYGVHG 1198
IH A+K L+E+ V+++++ MY+K G + ++ F + K++VSW MI+ + + G
Sbjct: 269 GIHGLAVKLGLSEEVMVNNAMVYMYSKCGYLNEAQMSFVKNNNKNVVSWNTMISAFSLEG 328
Query: 1197 RGKDAIELFERMQSEG--LKPDAFTFISLLMACSHSGLVGEGLKYFSEMRTKNYIEPKLE 1024
+A L + MQ +G +K + T +++L AC L LK ++ + +E
Sbjct: 329 DVNEAFNLLQEMQIQGEEMKANEVTILNVLPACLDK-LQLRSLKELHGYSFRHCFQ-HVE 386
Query: 1023 HYACMVDMLGRAGHLNHALNLLEEMPEKPDAGIWGALLSSCKTHGD 886
+ + G LN A + + +K W AL+ +GD
Sbjct: 387 LSNAFILAYAKCGALNSAEKVFHGIGDK-TVSSWNALIGGHAQNGD 431
Score = 64.7 bits (156), Expect = 6e-08
Identities = 49/193 (25%), Positives = 94/193 (48%), Gaps = 3/193 (1%)
Frame = -2
Query: 1458 VRLQPLEIAVVSVLSACAQLAALRLGKEIHCFALKA-ELTEDAFVSSSIIDMYAKSGCIE 1282
+ LQ E A+ +L AC + G+ +H F + D +++ +I MYA G
Sbjct: 38 ISLQAKE-AIGLLLQACGNQKDIETGRRLHKFVSDSTHYRNDYVLNTRLIKMYAMCGSPL 96
Query: 1281 QSWRVFGRLREKDMVSWTVMIAGYGVHGRGKDAIELFERMQSE-GLKPDAFTFISLLMAC 1105
S VF + K+++ W +++GY +G D +++F + S+ +PD FTF S++ AC
Sbjct: 97 DSRLVFDNMETKNLIQWNALVSGYTRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSVIKAC 156
Query: 1104 SHSGLVGEGL-KYFSEMRTKNYIEPKLEHYACMVDMLGRAGHLNHALNLLEEMPEKPDAG 928
G++ L + M K + + +V M G+ G ++ A+ + + MPE +
Sbjct: 157 --GGILDVRLGEVIHGMVIKMGLVLDVFVGNALVGMYGKCGAVDEAMKVFDFMPE-TNLV 213
Query: 927 IWGALLSSCKTHG 889
W +++ + +G
Sbjct: 214 SWNSMICAFSENG 226
>ref|XP_003595674.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355484722|gb|AES65925.1| Pentatricopeptide repeat
protein [Medicago truncatula]
Length = 975
Score = 547 bits (1409), Expect = e-153
Identities = 251/411 (61%), Positives = 327/411 (79%)
Frame = -2
Query: 1554 DKNLVCWNAMIAGFSQNGFPDKAIDLFRRMQCVRLQPLEIAVVSVLSACAQLAALRLGKE 1375
+KNLVCWN MI GFSQN FP A+D+F +M ++ P EI+++ L AC+Q++ALRLGKE
Sbjct: 565 EKNLVCWNTMINGFSQNEFPFDALDMFHQMLSSKIWPDEISIIGALGACSQVSALRLGKE 624
Query: 1374 IHCFALKAELTEDAFVSSSIIDMYAKSGCIEQSWRVFGRLREKDMVSWTVMIAGYGVHGR 1195
+HCFA+K+ LTE +FV+ S+IDMYAK GC+EQS +F R+ K V+W V+I GYG+HG
Sbjct: 625 LHCFAVKSHLTEHSFVTCSLIDMYAKCGCMEQSQNIFDRVHLKGEVTWNVLITGYGIHGH 684
Query: 1194 GKDAIELFERMQSEGLKPDAFTFISLLMACSHSGLVGEGLKYFSEMRTKNYIEPKLEHYA 1015
G+ AIELF+ MQ+ G +PD+ TFI+LL AC+H+GLV EGL+Y +M++ I+PKLEHYA
Sbjct: 685 GRKAIELFKSMQNAGFRPDSVTFIALLTACNHAGLVAEGLEYLGQMQSLFGIKPKLEHYA 744
Query: 1014 CMVDMLGRAGHLNHALNLLEEMPEKPDAGIWGALLSSCKTHGDVVLGQKVSEILLDLEPY 835
C+VDMLGRAG LN AL L+ E+P+KPD+ IW +LLSSC+ + D+ +G+KV+ LL+L P
Sbjct: 745 CVVDMLGRAGRLNEALELVNELPDKPDSRIWSSLLSSCRNYRDLDIGEKVANKLLELGPD 804
Query: 834 KAENYVLVSNLFAKAGRWEDVRRVRGRMKEMGLKKDIGCSWIEVEGKIYNFIVGDKTLPD 655
KAENYVL+SN +A+ G+W++VR++R RMKE+GL+KD GCSWIE+ GK+ F+VGD++L
Sbjct: 805 KAENYVLISNFYARLGKWDEVRKMRQRMKEIGLQKDAGCSWIEIGGKVSRFLVGDESLLQ 864
Query: 654 SEEIRQMWQELEHKIGEIGYVPDTGSVLHDLDEQEKADILRGHSEKLAIAFGLLKTTKGM 475
S +I+Q W ELE KI +IGY PDT VLH+L+E EK ILR HSEKLAI+FGLL T KG
Sbjct: 865 SMKIQQTWIELEKKINKIGYKPDTSCVLHELEEDEKIKILRNHSEKLAISFGLLNTAKGT 924
Query: 474 TVRICKNLRMCADCHNAAKLVSKVVHRDIIVRDNKRFHHFSAGICSCGDYW 322
T+R+CKNLR+C DCHNA KLVSK+ R+IIVRDNKRFHHF G CSCGDYW
Sbjct: 925 TLRVCKNLRICVDCHNAIKLVSKIDKREIIVRDNKRFHHFKNGFCSCGDYW 975
Score = 100 bits (250), Expect = 8e-19
Identities = 60/204 (29%), Positives = 112/204 (54%), Gaps = 3/204 (1%)
Frame = -2
Query: 1557 RDKNLVCWNAMIAGFSQNGFPDKAIDLFRRM-QCVRLQPLEIAVVSVLSACAQLAALRLG 1381
R KNL WNA+++G+ +N A+ +F M P + V+ AC + +RLG
Sbjct: 156 RRKNLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYDVRLG 215
Query: 1380 KEIHCFALKAELTEDAFVSSSIIDMYAKSGCIEQSWRVFGRLREKDMVSWTVMIAGYGVH 1201
+ +H FALK ++ D FV +++I MY K G +E + +VF ++ ++++VSW ++ +
Sbjct: 216 EAVHGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLEN 275
Query: 1200 GRGKDAIELFERMQS--EGLKPDAFTFISLLMACSHSGLVGEGLKYFSEMRTKNYIEPKL 1027
G +++ LF+ + + EGL PD T ++++ C+ G V G+ F + K + +L
Sbjct: 276 GVFEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGM-VFHGLALKLGLCGEL 334
Query: 1026 EHYACMVDMLGRAGHLNHALNLLE 955
+ + ++DM + G+L A L +
Sbjct: 335 KVNSSLLDMYSKCGYLCEARVLFD 358
Score = 95.5 bits (236), Expect = 3e-17
Identities = 61/209 (29%), Positives = 110/209 (52%), Gaps = 4/209 (1%)
Frame = -2
Query: 1554 DKNLVCWNAMIAGFSQNGFPDKAIDLFRRMQCV-RLQPLEIAVVSVLSACAQLAALRLGK 1378
+KN++ WN+MI G+S++ A +L R+MQ +++ E+ +++VL C + K
Sbjct: 361 EKNVISWNSMIGGYSKDRDFRGAFELLRKMQMEDKVKVNEVTLLNVLPVCEEEIQFLKLK 420
Query: 1377 EIHCFALK-AELTEDAFVSSSIIDMYAKSGCIEQSWRVFGRLREKDMVSWTVMIAGYGVH 1201
EIH +AL+ + D V+++ + YAK G + + VF + K + SW +I G+ +
Sbjct: 421 EIHGYALRHGFIQSDELVANAFVAGYAKCGSLHYAEGVFCGMESKMVSSWNALIGGHVQN 480
Query: 1200 GRGKDAIELFERMQSEGLKPDAFTFISLLMACSHSGLVGEGLKYFSEMRTKNYIEPKLEH 1021
G + A++L+ M+ GL+PD FT SLL AC+ + G + M + +L+
Sbjct: 481 GFPRKALDLYLLMRGSGLEPDLFTIASLLSACARLKSLSCGKEIHGSMLRNGF---ELDE 537
Query: 1020 YAC--MVDMLGRAGHLNHALNLLEEMPEK 940
+ C +V + + G + A + M EK
Sbjct: 538 FICISLVSLYVQCGKILLAKLFFDNMEEK 566
Score = 80.9 bits (198), Expect = 9e-13
Identities = 51/152 (33%), Positives = 84/152 (55%), Gaps = 3/152 (1%)
Frame = -2
Query: 1551 KNLVCWNAMIAGFSQNGFPDKAIDLFRRMQC--VRLQPLEIAVVSVLSACAQLAALRLGK 1378
+NLV WN+++ +NG +++ LF+ + L P +V+V+ CA+ +RLG
Sbjct: 260 RNLVSWNSVMYACLENGVFEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGM 319
Query: 1377 EIHCFALKAELTEDAFVSSSIIDMYAKSGCIEQSWRVFGRLREKDMVSWTVMIAGYGVHG 1198
H ALK L + V+SS++DMY+K G + ++ RV EK+++SW MI GY
Sbjct: 320 VFHGLALKLGLCGELKVNSSLLDMYSKCGYLCEA-RVLFDTNEKNVISWNSMIGGYSKDR 378
Query: 1197 RGKDAIELFERMQSEG-LKPDAFTFISLLMAC 1105
+ A EL +MQ E +K + T +++L C
Sbjct: 379 DFRGAFELLRKMQMEDKVKVNEVTLLNVLPVC 410
Score = 58.5 bits (140), Expect = 5e-06
Identities = 42/182 (23%), Positives = 90/182 (49%), Gaps = 4/182 (2%)
Frame = -2
Query: 1422 VLSACAQLAALRLGKEIHCF-ALKAELTEDAFVSSSIIDMYAKSGCIEQSWRVFGRLREK 1246
+L C + + +G++IH F + D + + ++ MY+ S VF R K
Sbjct: 99 LLQLCGEYKNIEIGRKIHNFISTSPHFQNDVVLITRLVTMYSICDSPYDSCLVFNASRRK 158
Query: 1245 DMVSWTVMIAGYGVHGRGKDAIELFERMQS-EGLKPDAFTFISLLMAC--SHSGLVGEGL 1075
++ W +++GY + +DA+ +F M S PD FT ++ AC + +GE +
Sbjct: 159 NLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYDVRLGEAV 218
Query: 1074 KYFSEMRTKNYIEPKLEHYACMVDMLGRAGHLNHALNLLEEMPEKPDAGIWGALLSSCKT 895
F+ ++TK + + + ++ M G+ G + A+ + ++MP++ + W +++ +C
Sbjct: 219 HGFA-LKTKVLSDVFVGN--ALIAMYGKFGFVESAVKVFDKMPQR-NLVSWNSVMYACLE 274
Query: 894 HG 889
+G
Sbjct: 275 NG 276