BLASTX nr result

ID: Coptis24_contig00019219 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019219
         (716 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312716.1| predicted protein [Populus trichocarpa] gi|2...    70   5e-23
ref|XP_003546106.1| PREDICTED: uncharacterized protein LOC100527...    62   5e-19
gb|ACU16139.1| unknown [Glycine max]                                   62   5e-19
ref|XP_003541652.1| PREDICTED: uncharacterized protein LOC100777...    62   8e-19
ref|XP_002277762.1| PREDICTED: uncharacterized protein LOC100259...    65   2e-18

>ref|XP_002312716.1| predicted protein [Populus trichocarpa] gi|222852536|gb|EEE90083.1|
           predicted protein [Populus trichocarpa]
          Length = 359

 Score = 70.1 bits (170), Expect(2) = 5e-23
 Identities = 32/48 (66%), Positives = 38/48 (79%)
 Frame = +2

Query: 572 AKSDNLCHVDMEADDKEIPEEEAVCRICFISLCEGGNTFKMECSCKGD 715
           + +D +  V M+ADD+EI EEEAVCRICF  +CE GNT KMECSCKGD
Sbjct: 168 SNADQITPVPMQADDEEIAEEEAVCRICF-DVCEEGNTLKMECSCKGD 214



 Score = 63.9 bits (154), Expect(2) = 5e-23
 Identities = 39/77 (50%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
 Frame = +1

Query: 235 ESPVLSSIFC--SWKRCVSLPVTPAILSPSNLCGEQKSSEQKTAPPRVSRSMSVPVRNVV 408
           +SP+++S     SW+RC SLPVTPA    SNL      S  K A   + RS+SVP RNVV
Sbjct: 94  DSPIMASFKSAFSWERCTSLPVTPA----SNLSPSPSVSMPKVAGHVIPRSLSVPGRNVV 149

Query: 409 IVRSGSSAVHKEPVQTD 459
           IV+S S A H E V TD
Sbjct: 150 IVQSASFATHDEHVATD 166


>ref|XP_003546106.1| PREDICTED: uncharacterized protein LOC100527094 [Glycine max]
          Length = 422

 Score = 62.0 bits (149), Expect(2) = 5e-19
 Identities = 30/49 (61%), Positives = 36/49 (73%), Gaps = 1/49 (2%)
 Frame = +2

Query: 572 AKSDNLCHVDMEAD-DKEIPEEEAVCRICFISLCEGGNTFKMECSCKGD 715
           +  D +  V +E   D+EIPEEEAVCRICF  +C+  NTFKMECSCKGD
Sbjct: 190 SNDDQITPVQVEVTADEEIPEEEAVCRICF-DVCDERNTFKMECSCKGD 237



 Score = 58.5 bits (140), Expect(2) = 5e-19
 Identities = 40/85 (47%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
 Frame = +1

Query: 235 ESPVLSSIF-CSWKRCVSLPVTPAI-LSPS-------NLCGEQKSSEQKTAPPRVSRSMS 387
           + P ++SI   +WKRC SLPVTPA  LSPS           EQ    +     +VSRS+S
Sbjct: 106 DGPNMASISEIAWKRCTSLPVTPASNLSPSVSTPISARTYNEQTKPHKDVDRSKVSRSLS 165

Query: 388 VPVRNVVIVRSGSSAVHKEPVQTDS 462
           VP RNVVIVRS S +   E  Q DS
Sbjct: 166 VPGRNVVIVRSVSFSTRSEQEQQDS 190


>gb|ACU16139.1| unknown [Glycine max]
          Length = 254

 Score = 62.0 bits (149), Expect(2) = 5e-19
 Identities = 30/49 (61%), Positives = 36/49 (73%), Gaps = 1/49 (2%)
 Frame = +2

Query: 572 AKSDNLCHVDMEAD-DKEIPEEEAVCRICFISLCEGGNTFKMECSCKGD 715
           +  D +  V +E   D+EIPEEEAVCRICF  +C+  NTFKMECSCKGD
Sbjct: 190 SNDDQITPVQVEVTADEEIPEEEAVCRICF-DVCDERNTFKMECSCKGD 237



 Score = 58.5 bits (140), Expect(2) = 5e-19
 Identities = 40/85 (47%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
 Frame = +1

Query: 235 ESPVLSSIF-CSWKRCVSLPVTPAI-LSPS-------NLCGEQKSSEQKTAPPRVSRSMS 387
           + P ++SI   +WKRC SLPVTPA  LSPS           EQ    +     +VSRS+S
Sbjct: 106 DGPNMASISEIAWKRCTSLPVTPASNLSPSVSTPISARTYNEQTKPHKDVDRSKVSRSLS 165

Query: 388 VPVRNVVIVRSGSSAVHKEPVQTDS 462
           VP RNVVIVRS S +   E  Q DS
Sbjct: 166 VPGRNVVIVRSVSFSTRSEQEQQDS 190


>ref|XP_003541652.1| PREDICTED: uncharacterized protein LOC100777100 [Glycine max]
          Length = 410

 Score = 61.6 bits (148), Expect(2) = 8e-19
 Identities = 30/49 (61%), Positives = 36/49 (73%), Gaps = 1/49 (2%)
 Frame = +2

Query: 572 AKSDNLCHVDMEAD-DKEIPEEEAVCRICFISLCEGGNTFKMECSCKGD 715
           +  D +  V +E   D+EIPEEEAVCRICF  +C+  NTFKMECSCKGD
Sbjct: 191 SNDDQITPVPVEVTADEEIPEEEAVCRICF-DVCDERNTFKMECSCKGD 238



 Score = 58.2 bits (139), Expect(2) = 8e-19
 Identities = 40/85 (47%), Positives = 49/85 (57%), Gaps = 9/85 (10%)
 Frame = +1

Query: 235 ESPVLSSIF-CSWKRCVSLPVTPAI-LSPS-------NLCGEQKSSEQKTAPPRVSRSMS 387
           +SP ++SI   +WKRC SLPVTPA  LSPS           EQ    +     +VSRS+S
Sbjct: 107 DSPNMASISEIAWKRCTSLPVTPASNLSPSVSTPISARAYNEQTKPHKDVDCSKVSRSLS 166

Query: 388 VPVRNVVIVRSGSSAVHKEPVQTDS 462
           VP RNVVIVRS S +   E  Q +S
Sbjct: 167 VPGRNVVIVRSVSFSTRSEQEQQES 191


>ref|XP_002277762.1| PREDICTED: uncharacterized protein LOC100259554 [Vitis vinifera]
           gi|297736929|emb|CBI26130.3| unnamed protein product
           [Vitis vinifera]
          Length = 429

 Score = 65.5 bits (158), Expect(2) = 2e-18
 Identities = 29/51 (56%), Positives = 38/51 (74%)
 Frame = +2

Query: 560 ISSIAKSDNLCHVDMEADDKEIPEEEAVCRICFISLCEGGNTFKMECSCKG 712
           + + +  D +  V M+ +D+EIPEEEAVCRIC + +CE GNT KMECSCKG
Sbjct: 193 VQTESSDDQITPVPMQNEDEEIPEEEAVCRIC-LEVCEEGNTLKMECSCKG 242



 Score = 53.1 bits (126), Expect(2) = 2e-18
 Identities = 37/89 (41%), Positives = 49/89 (55%), Gaps = 13/89 (14%)
 Frame = +1

Query: 235 ESPVLSSIF--CSWKRCVSLPVT------PAILSPSNLCGEQKSSEQKTAP-----PRVS 375
           ESP LS+     +WKR  SLPV+      P++ +P++     +       P     P VS
Sbjct: 109 ESPRLSNFMDVFNWKRSTSLPVSHASNLSPSVSTPTSARPYNERPRSHKGPVHMVDPVVS 168

Query: 376 RSMSVPVRNVVIVRSGSSAVHKEPVQTDS 462
           RS+S+P RNVVIVRS S A   E VQT+S
Sbjct: 169 RSLSIPGRNVVIVRSVSFATRHEQVQTES 197


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