BLASTX nr result

ID: Coptis24_contig00019218 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019218
         (899 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004150597.1| PREDICTED: DUF246 domain-containing protein ...   414   e-113
ref|XP_002284457.1| PREDICTED: DUF246 domain-containing protein ...   412   e-113
emb|CAN77011.1| hypothetical protein VITISV_036881 [Vitis vinifera]   412   e-113
ref|XP_003529417.1| PREDICTED: DUF246 domain-containing protein ...   409   e-112
ref|XP_002526030.1| conserved hypothetical protein [Ricinus comm...   408   e-112

>ref|XP_004150597.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Cucumis
           sativus] gi|449514634|ref|XP_004164435.1| PREDICTED:
           DUF246 domain-containing protein At1g04910-like [Cucumis
           sativus]
          Length = 563

 Score =  414 bits (1064), Expect = e-113
 Identities = 205/266 (77%), Positives = 233/266 (87%), Gaps = 5/266 (1%)
 Frame = +3

Query: 117 ARSKTGPRF----QP-RTFLQRVAWIVLSVVLRRQGVFLFAPLIYISGMLLYMGTVSLDN 281
           +RSK G RF    QP RTF QR+AW++LSV+LRRQG+FLFAPLIYISGMLLYMGTVS D 
Sbjct: 30  SRSK-GARFTQAQQPGRTFPQRLAWLILSVLLRRQGIFLFAPLIYISGMLLYMGTVSFD- 87

Query: 282 VVPSIAKSSRSPPGSVYRSPQLYIKLRHEMDEDNSSNDALASIWKRSYKGGEWRPCINMT 461
           VVP I    R  PGSVYRSPQL  KLRHEMD DN+S DA+++IWK SYKGG+W+PCIN +
Sbjct: 88  VVPVI--KHRPAPGSVYRSPQLLAKLRHEMDSDNTSTDAISTIWKHSYKGGQWKPCINNS 145

Query: 462 IGDLPDSNGYIYVEANGGLNQQRTSICNAVAVAGYLNATLVIPNFHYHSIWRDPSKFRDI 641
            G LP+SNGYIYVEANGGLNQQRTSICNAVAVAGYLNATLVIPNFH+HSIWRDPSKF +I
Sbjct: 146 SGGLPESNGYIYVEANGGLNQQRTSICNAVAVAGYLNATLVIPNFHFHSIWRDPSKFSEI 205

Query: 642 YDEDHFVNTLINDVRVVDRLPEYIMERFDHNMSNVYNFKIKAWASIRYYKDAVLPKLHEE 821
           YDE++F+ TL NDVR+V+++PEYIMERFDHNM+NVYNF+IKAW+SI+YYKD VLP+L EE
Sbjct: 206 YDEEYFIKTLENDVRIVNKIPEYIMERFDHNMTNVYNFRIKAWSSIQYYKDTVLPRLLEE 265

Query: 822 QFIRISPFANRLSFDAPPAVQRLRCL 899
             IRISPFANRLSFDAPP VQRLRCL
Sbjct: 266 LVIRISPFANRLSFDAPPTVQRLRCL 291


>ref|XP_002284457.1| PREDICTED: DUF246 domain-containing protein At1g04910 [Vitis
           vinifera] gi|297737694|emb|CBI26895.3| unnamed protein
           product [Vitis vinifera]
          Length = 561

 Score =  412 bits (1058), Expect = e-113
 Identities = 204/265 (76%), Positives = 233/265 (87%), Gaps = 5/265 (1%)
 Frame = +3

Query: 120 RSKTGPRF----QP-RTFLQRVAWIVLSVVLRRQGVFLFAPLIYISGMLLYMGTVSLDNV 284
           RSK G RF    QP RTF QR+AW++LSV+LRRQG+FLFAPLIYISGMLLYMGTVS D V
Sbjct: 29  RSKQG-RFAAGQQPGRTFAQRLAWLILSVLLRRQGIFLFAPLIYISGMLLYMGTVSFD-V 86

Query: 285 VPSIAKSSRSPPGSVYRSPQLYIKLRHEMDEDNSSNDALASIWKRSYKGGEWRPCINMTI 464
           VP I    R  PGSVYRSPQ+Y KLR EMD DNS++D ++++WK SYK GEW+PC+N + 
Sbjct: 87  VPVI--KHRPAPGSVYRSPQVYAKLRPEMDSDNSTSDTISTVWKHSYKSGEWQPCVNRSS 144

Query: 465 GDLPDSNGYIYVEANGGLNQQRTSICNAVAVAGYLNATLVIPNFHYHSIWRDPSKFRDIY 644
           G LP+SNGYIYVEANGGLNQQRTSI NAVAVAGYLNATL+IP+FHYHSIWRDPSKF+DIY
Sbjct: 145 GGLPESNGYIYVEANGGLNQQRTSIGNAVAVAGYLNATLIIPHFHYHSIWRDPSKFKDIY 204

Query: 645 DEDHFVNTLINDVRVVDRLPEYIMERFDHNMSNVYNFKIKAWASIRYYKDAVLPKLHEEQ 824
           DED+F+ TL NDV+VV+ +PEYIMERFDHNMSNVYNF+IKAW+SI+YY+DAVLPKL EE+
Sbjct: 205 DEDYFITTLENDVQVVNTIPEYIMERFDHNMSNVYNFRIKAWSSIQYYRDAVLPKLLEEK 264

Query: 825 FIRISPFANRLSFDAPPAVQRLRCL 899
            IRISPFANRLSFDAPPAVQRLRCL
Sbjct: 265 LIRISPFANRLSFDAPPAVQRLRCL 289


>emb|CAN77011.1| hypothetical protein VITISV_036881 [Vitis vinifera]
          Length = 575

 Score =  412 bits (1058), Expect = e-113
 Identities = 204/265 (76%), Positives = 233/265 (87%), Gaps = 5/265 (1%)
 Frame = +3

Query: 120 RSKTGPRF----QP-RTFLQRVAWIVLSVVLRRQGVFLFAPLIYISGMLLYMGTVSLDNV 284
           RSK G RF    QP RTF QR+AW++LSV+LRRQG+FLFAPLIYISGMLLYMGTVS D V
Sbjct: 29  RSKQG-RFAAGQQPGRTFAQRLAWLILSVLLRRQGIFLFAPLIYISGMLLYMGTVSFD-V 86

Query: 285 VPSIAKSSRSPPGSVYRSPQLYIKLRHEMDEDNSSNDALASIWKRSYKGGEWRPCINMTI 464
           VP I    R  PGSVYRSPQ+Y KLR EMD DNS++D ++++WK SYK GEW+PC+N + 
Sbjct: 87  VPVI--KHRPAPGSVYRSPQVYAKLRPEMDSDNSTSDTISTVWKHSYKSGEWQPCVNRSS 144

Query: 465 GDLPDSNGYIYVEANGGLNQQRTSICNAVAVAGYLNATLVIPNFHYHSIWRDPSKFRDIY 644
           G LP+SNGYIYVEANGGLNQQRTSI NAVAVAGYLNATL+IP+FHYHSIWRDPSKF+DIY
Sbjct: 145 GGLPESNGYIYVEANGGLNQQRTSIGNAVAVAGYLNATLIIPHFHYHSIWRDPSKFKDIY 204

Query: 645 DEDHFVNTLINDVRVVDRLPEYIMERFDHNMSNVYNFKIKAWASIRYYKDAVLPKLHEEQ 824
           DED+F+ TL NDV+VV+ +PEYIMERFDHNMSNVYNF+IKAW+SI+YY+DAVLPKL EE+
Sbjct: 205 DEDYFITTLENDVQVVNTIPEYIMERFDHNMSNVYNFRIKAWSSIQYYRDAVLPKLLEEK 264

Query: 825 FIRISPFANRLSFDAPPAVQRLRCL 899
            IRISPFANRLSFDAPPAVQRLRCL
Sbjct: 265 LIRISPFANRLSFDAPPAVQRLRCL 289


>ref|XP_003529417.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Glycine
           max]
          Length = 564

 Score =  409 bits (1050), Expect = e-112
 Identities = 203/269 (75%), Positives = 230/269 (85%), Gaps = 5/269 (1%)
 Frame = +3

Query: 108 RYGARSKTGPRFQP-----RTFLQRVAWIVLSVVLRRQGVFLFAPLIYISGMLLYMGTVS 272
           R+  RSK G RF P     RT  QR++W+ LSV+LRRQGVFLFAPLIYISGMLLYMGT S
Sbjct: 28  RHAGRSKAG-RFSPSRGSGRTAAQRLSWMFLSVLLRRQGVFLFAPLIYISGMLLYMGTAS 86

Query: 273 LDNVVPSIAKSSRSPPGSVYRSPQLYIKLRHEMDEDNSSNDALASIWKRSYKGGEWRPCI 452
            D VVP I    R  PGSVYRSPQL+ KLR +MD DNSS DA+++IWK  Y+GGEW+PC+
Sbjct: 87  FD-VVPVI--KHRPAPGSVYRSPQLFAKLRLDMDSDNSSADAISTIWKYPYRGGEWKPCV 143

Query: 453 NMTIGDLPDSNGYIYVEANGGLNQQRTSICNAVAVAGYLNATLVIPNFHYHSIWRDPSKF 632
           N +  DLP+SNGYIYVEANGGLNQQRTS+CNAVAVAGYLNATLVIPNFHYHSIW+DPSKF
Sbjct: 144 NRSSEDLPESNGYIYVEANGGLNQQRTSVCNAVAVAGYLNATLVIPNFHYHSIWKDPSKF 203

Query: 633 RDIYDEDHFVNTLINDVRVVDRLPEYIMERFDHNMSNVYNFKIKAWASIRYYKDAVLPKL 812
           RDIYDE+ FVNTL NDVRVVD++PEY+MERF  NM+NV+NF+IKAW+SI+YYKD VLPKL
Sbjct: 204 RDIYDEEFFVNTLKNDVRVVDKIPEYLMERFGSNMTNVHNFRIKAWSSIQYYKDVVLPKL 263

Query: 813 HEEQFIRISPFANRLSFDAPPAVQRLRCL 899
            EE+ IRISPFANRLSFDAPPAVQRLRCL
Sbjct: 264 LEEKVIRISPFANRLSFDAPPAVQRLRCL 292


>ref|XP_002526030.1| conserved hypothetical protein [Ricinus communis]
           gi|223534677|gb|EEF36370.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 570

 Score =  408 bits (1049), Expect = e-112
 Identities = 200/278 (71%), Positives = 232/278 (83%), Gaps = 14/278 (5%)
 Frame = +3

Query: 108 RYGARSKTGPRFQP--------------RTFLQRVAWIVLSVVLRRQGVFLFAPLIYISG 245
           RY + S++  RF P              RT   R+AW++LSV+LRRQG+FLFAPLIYISG
Sbjct: 26  RYRSSSRSNKRFTPASSSPWSHTPGGGGRTIAHRLAWLLLSVLLRRQGIFLFAPLIYISG 85

Query: 246 MLLYMGTVSLDNVVPSIAKSSRSPPGSVYRSPQLYIKLRHEMDEDNSSNDALASIWKRSY 425
           MLLYMGTVS D V P I    + PPGSVYRSPQLY KL  EMD DNSS DAL++IWK SY
Sbjct: 86  MLLYMGTVSFD-VGPVI--QHKPPPGSVYRSPQLYQKLLPEMDADNSSADALSTIWKNSY 142

Query: 426 KGGEWRPCINMTIGDLPDSNGYIYVEANGGLNQQRTSICNAVAVAGYLNATLVIPNFHYH 605
           KGG WR C+N + G LP+SNGYIYVEANGGLNQQRTSICNAVAVAGYLNATL+IPNFH+H
Sbjct: 143 KGGGWRSCVNKSSGGLPESNGYIYVEANGGLNQQRTSICNAVAVAGYLNATLLIPNFHFH 202

Query: 606 SIWRDPSKFRDIYDEDHFVNTLINDVRVVDRLPEYIMERFDHNMSNVYNFKIKAWASIRY 785
           SIWRDPSKFRDIYDE++F++TL NDVRVVD++PEY+MERFDHN++NVYNF++KAW+SI+Y
Sbjct: 203 SIWRDPSKFRDIYDEEYFISTLENDVRVVDKIPEYLMERFDHNLTNVYNFRVKAWSSIQY 262

Query: 786 YKDAVLPKLHEEQFIRISPFANRLSFDAPPAVQRLRCL 899
           Y+D VLP+L EE+ IRISPFANRLSFDAPPAVQRLRCL
Sbjct: 263 YRDVVLPRLLEEKVIRISPFANRLSFDAPPAVQRLRCL 300


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