BLASTX nr result

ID: Coptis24_contig00019214 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019214
         (348 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAC84387.1| putative ubiquinone biosynthesis protein ubiB [O...   120   9e-26
gb|EEC81973.1| hypothetical protein OsI_25885 [Oryza sativa Indi...   120   9e-26
ref|XP_002515384.1| Protein ABC1, mitochondrial precursor, putat...   120   1e-25
ref|XP_002461947.1| hypothetical protein SORBIDRAFT_02g011010 [S...   119   3e-25
ref|XP_002324357.1| predicted protein [Populus trichocarpa] gi|2...   118   6e-25

>dbj|BAC84387.1| putative ubiquinone biosynthesis protein ubiB [Oryza sativa
           Japonica Group] gi|222636983|gb|EEE67115.1| hypothetical
           protein OsJ_24137 [Oryza sativa Japonica Group]
          Length = 722

 Score =  120 bits (302), Expect = 9e-26
 Identities = 63/109 (57%), Positives = 76/109 (69%)
 Frame = -1

Query: 327 SASNAMGWKNFDMRSVVSATEDLFNFILSEKGWRVRVYLVQDIIKAADVVLSEKTFPFIF 148
           +A+N  GW++FDM SVV+ATEDLF+FILS KGWRVRV+LVQDI+KA+D  L E TFP IF
Sbjct: 573 NAANKPGWRSFDMHSVVAATEDLFHFILSRKGWRVRVFLVQDIVKASDAFLQEATFPGIF 632

Query: 147 NEKSEVRETPGFEGHAMITRVVKALQSLLQAVKLAPGVWVAMLLRLAKK 1
           +E+    E    E   MI RVV  +QS  QA+ LAP  W AML R   K
Sbjct: 633 DEEGTTGELHP-ERSKMIRRVVHGVQSFRQAISLAPDAWTAMLFRTLLK 680


>gb|EEC81973.1| hypothetical protein OsI_25885 [Oryza sativa Indica Group]
          Length = 721

 Score =  120 bits (302), Expect = 9e-26
 Identities = 63/109 (57%), Positives = 76/109 (69%)
 Frame = -1

Query: 327 SASNAMGWKNFDMRSVVSATEDLFNFILSEKGWRVRVYLVQDIIKAADVVLSEKTFPFIF 148
           +A+N  GW++FDM SVV+ATEDLF+FILS KGWRVRV+LVQDI+KA+D  L E TFP IF
Sbjct: 572 NAANKPGWRSFDMHSVVAATEDLFHFILSRKGWRVRVFLVQDIVKASDAFLQEATFPGIF 631

Query: 147 NEKSEVRETPGFEGHAMITRVVKALQSLLQAVKLAPGVWVAMLLRLAKK 1
           +E+    E    E   MI RVV  +QS  QA+ LAP  W AML R   K
Sbjct: 632 DEEGTTGELHP-ERSKMIRRVVHGVQSFRQAISLAPDAWTAMLFRTLLK 679


>ref|XP_002515384.1| Protein ABC1, mitochondrial precursor, putative [Ricinus communis]
           gi|223545328|gb|EEF46833.1| Protein ABC1, mitochondrial
           precursor, putative [Ricinus communis]
          Length = 732

 Score =  120 bits (301), Expect = 1e-25
 Identities = 60/107 (56%), Positives = 73/107 (68%)
 Frame = -1

Query: 321 SNAMGWKNFDMRSVVSATEDLFNFILSEKGWRVRVYLVQDIIKAADVVLSEKTFPFIFNE 142
           +N  GWK+FDMRSVV ATEDL  FILSEKGWRVRV+L++D+IK  D  L ++    I +E
Sbjct: 576 TNPFGWKSFDMRSVVGATEDLLLFILSEKGWRVRVFLIRDLIKVVDAFLEDEVVGCISDE 635

Query: 141 KSEVRETPGFEGHAMITRVVKALQSLLQAVKLAPGVWVAMLLRLAKK 1
           K E  E    E H+M+ RVV   Q L QAVKLAP +W  ML+RL  K
Sbjct: 636 KYEASEASKSESHSMVMRVVDGFQYLRQAVKLAPEMWTVMLIRLTLK 682


>ref|XP_002461947.1| hypothetical protein SORBIDRAFT_02g011010 [Sorghum bicolor]
           gi|241925324|gb|EER98468.1| hypothetical protein
           SORBIDRAFT_02g011010 [Sorghum bicolor]
          Length = 250

 Score =  119 bits (297), Expect = 3e-25
 Identities = 62/114 (54%), Positives = 80/114 (70%), Gaps = 3/114 (2%)
 Frame = -1

Query: 333 ASSASNAMG---WKNFDMRSVVSATEDLFNFILSEKGWRVRVYLVQDIIKAADVVLSEKT 163
           A S+ NA G   W++FDM SV++ATEDLF+FILS KGWRVRV+LVQDI+KA+DV L E T
Sbjct: 95  ADSSENANGSPEWRSFDMHSVIAATEDLFDFILSRKGWRVRVFLVQDIVKASDVFLQEAT 154

Query: 162 FPFIFNEKSEVRETPGFEGHAMITRVVKALQSLLQAVKLAPGVWVAMLLRLAKK 1
           FP+IF+   ++ +    E   MI R+V  +QS  QA+ LAP  W AML+R   K
Sbjct: 155 FPYIFDNVGKIGDI-NPERSKMIRRLVNTVQSFRQAISLAPDAWSAMLIRTLLK 207


>ref|XP_002324357.1| predicted protein [Populus trichocarpa] gi|222865791|gb|EEF02922.1|
           predicted protein [Populus trichocarpa]
          Length = 657

 Score =  118 bits (295), Expect = 6e-25
 Identities = 63/109 (57%), Positives = 80/109 (73%)
 Frame = -1

Query: 327 SASNAMGWKNFDMRSVVSATEDLFNFILSEKGWRVRVYLVQDIIKAADVVLSEKTFPFIF 148
           ++S+ +GWK+FDMRSVV+ATEDL  FILSEKG RVRV+L++D+IKAADV L ++    + 
Sbjct: 505 NSSDPLGWKSFDMRSVVNATEDLLLFILSEKGGRVRVFLLRDVIKAADVFLQDEA--GVL 562

Query: 147 NEKSEVRETPGFEGHAMITRVVKALQSLLQAVKLAPGVWVAMLLRLAKK 1
           NEK E RE    E +A  TRV K    L QAVKLAP +W AML+R+A K
Sbjct: 563 NEKPEAREASDSEVNATHTRVAKGFHYLRQAVKLAPELWTAMLIRMALK 611


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