BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019204
         (246 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003519723.1| PREDICTED: pentatricopeptide repeat-containi...   102   3e-20
ref|XP_002461091.1| hypothetical protein SORBIDRAFT_02g040530 [S...    89   4e-16
ref|XP_003559913.1| PREDICTED: pentatricopeptide repeat-containi...    87   1e-15
tpg|DAA63801.1| TPA: hypothetical protein ZEAMMB73_367984 [Zea m...    86   3e-15
ref|NP_001060389.1| Os07g0635800 [Oryza sativa Japonica Group] g...    84   9e-15

>ref|XP_003519723.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 727

 Score =  102 bits (254), Expect = 3e-20
 Identities = 48/81 (59%), Positives = 63/81 (77%)
 Frame = -2

Query: 245 IVSWSTLIATHSQNCEYVKSIELYVEMLWSGIRTNAVTVASILPALANLKLLEQGKEMHN 66
           +VSWSTLIA +SQNC Y +S +LY+ M+  G+ TNA+   S+LPAL  L+LL+QGKEMHN
Sbjct: 299 VVSWSTLIAGYSQNCLYQESYKLYIGMINVGLATNAIVATSVLPALGKLELLKQGKEMHN 358

Query: 65  YVIRHGFESDIFVGSALIDMY 3
           +V++ G  SD+ VGSALI MY
Sbjct: 359 FVLKEGLMSDVVVGSALIVMY 379



 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 31/81 (38%), Positives = 51/81 (62%)
 Frame = -2

Query: 245 IVSWSTLIATHSQNCEYVKSIELYVEMLWSGIRTNAVTVASILPALANLKLLEQGKEMHN 66
           + SW+ LI     N E ++++ L+ +M   G+  ++V VASILPA   L+ ++ G  +  
Sbjct: 198 LASWTALICGTMWNGECLEALLLFRKMRSEGLMPDSVIVASILPACGRLEAVKLGMALQV 257

Query: 65  YVIRHGFESDIFVGSALIDMY 3
             +R GFESD++V +A+IDMY
Sbjct: 258 CAVRSGFESDLYVSNAVIDMY 278



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 27/81 (33%), Positives = 47/81 (58%)
 Frame = -2

Query: 245 IVSWSTLIATHSQNCEYVKSIELYVEMLWSGIRTNAVTVASILPALANLKLLEQGKEMHN 66
           I+ W+++I  ++   ++  +   +  +  +  R N +TV SILP    +  L QGKE+H 
Sbjct: 400 IMVWNSMIVGYNLVGDFESAFFTFRRIWGAEHRPNFITVVSILPICTQMGALRQGKEIHG 459

Query: 65  YVIRHGFESDIFVGSALIDMY 3
           YV + G   ++ VG++LIDMY
Sbjct: 460 YVTKSGLGLNVSVGNSLIDMY 480


>ref|XP_002461091.1| hypothetical protein SORBIDRAFT_02g040530 [Sorghum bicolor]
           gi|241924468|gb|EER97612.1| hypothetical protein
           SORBIDRAFT_02g040530 [Sorghum bicolor]
          Length = 695

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 41/81 (50%), Positives = 59/81 (72%)
 Frame = -2

Query: 245 IVSWSTLIATHSQNCEYVKSIELYVEMLWSGIRTNAVTVASILPALANLKLLEQGKEMHN 66
           ++SWST+IA HSQN  Y  S+ L+ EM+ SG++ N+ T+ASILP+L+ L+L   GKE+H 
Sbjct: 316 VISWSTIIAGHSQNRRYHVSVSLFSEMVASGVKPNSTTLASILPSLSELRLFRYGKEIHC 375

Query: 65  YVIRHGFESDIFVGSALIDMY 3
           + +R+G E   F+ SALID Y
Sbjct: 376 FSLRNGLEHSEFLASALIDFY 396


>ref|XP_003559913.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Brachypodium distachyon]
          Length = 692

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 40/81 (49%), Positives = 60/81 (74%)
 Frame = -2

Query: 245 IVSWSTLIATHSQNCEYVKSIELYVEMLWSGIRTNAVTVASILPALANLKLLEQGKEMHN 66
           +VSWSTLIA +SQN +   S+ L+ EM+ +G++ N+ T+ASILP+L+ +KL   GKE+H 
Sbjct: 313 VVSWSTLIAGYSQNGKDHVSVNLFTEMVTAGLKPNSNTMASILPSLSEMKLFRHGKEIHG 372

Query: 65  YVIRHGFESDIFVGSALIDMY 3
           + +R+GF+   F+GSA ID Y
Sbjct: 373 FSLRNGFDQSKFLGSAFIDFY 393



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 30/81 (37%), Positives = 47/81 (58%)
 Frame = -2

Query: 245 IVSWSTLIATHSQNCEYVKSIELYVEMLWSGIRTNAVTVASILPALANLKLLEQGKEMHN 66
           +V W++++A ++ N     ++  +  +   G R + VTV S+LP   +   L QGKE+H 
Sbjct: 414 LVIWNSMVAGYAVNGNTDSALCAFRALQKVGFRPDHVTVVSVLPVCNHHSRLIQGKELHA 473

Query: 65  YVIRHGFESDIFVGSALIDMY 3
           YV+RH   S   V +ALIDMY
Sbjct: 474 YVVRHYMSSVCSVSNALIDMY 494


>tpg|DAA63801.1| TPA: hypothetical protein ZEAMMB73_367984 [Zea mays]
          Length = 711

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 41/81 (50%), Positives = 58/81 (71%)
 Frame = -2

Query: 245 IVSWSTLIATHSQNCEYVKSIELYVEMLWSGIRTNAVTVASILPALANLKLLEQGKEMHN 66
           + SWST+IA HSQN  Y  S+ L+ EM+ SGI+ N+ T+ASILP+++ L+LL  GKE+H 
Sbjct: 332 VFSWSTIIAGHSQNRIYNVSVSLFTEMVASGIKPNSTTIASILPSISELRLLRYGKEIHC 391

Query: 65  YVIRHGFESDIFVGSALIDMY 3
           + +R+  E   F+ SALID Y
Sbjct: 392 FSLRNRLEHSEFLASALIDFY 412


>ref|NP_001060389.1| Os07g0635800 [Oryza sativa Japonica Group]
           gi|22293699|dbj|BAC10044.1| selenium-binding
           protein-like [Oryza sativa Japonica Group]
           gi|113611925|dbj|BAF22303.1| Os07g0635800 [Oryza sativa
           Japonica Group] gi|125601219|gb|EAZ40795.1| hypothetical
           protein OsJ_25273 [Oryza sativa Japonica Group]
          Length = 705

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 43/81 (53%), Positives = 57/81 (70%)
 Frame = -2

Query: 245 IVSWSTLIATHSQNCEYVKSIELYVEMLWSGIRTNAVTVASILPALANLKLLEQGKEMHN 66
           +VSWS+LI  +SQN  +  S+ L+ EM+  GI  N+ T+ASILP L+ LKL+  GKE+H 
Sbjct: 326 VVSWSSLIVGYSQNGMHNVSVSLFCEMISLGINPNSSTLASILPCLSVLKLIRSGKEIHC 385

Query: 65  YVIRHGFESDIFVGSALIDMY 3
           + IRHG E   FV SALID+Y
Sbjct: 386 FSIRHGLERSEFVVSALIDLY 406