BLASTX nr result
ID: Coptis24_contig00019200
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00019200
(540 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAZ67353.1| chloroplast ferritin [Malus x domestica] 74 1e-22
gb|ABD66598.1| iron-binding protein [Pyrus pyrifolia] 70 1e-21
gb|AFO70136.1| ferritin Fer14;1 [Glycine max] 68 2e-21
ref|NP_001237049.1| ferritin-4, chloroplastic [Glycine max] gi|2... 67 2e-21
pdb|3A68|A Chain A, Crystal Structure Of Plant Ferritin Reveals ... 67 2e-21
>gb|AAZ67353.1| chloroplast ferritin [Malus x domestica]
Length = 277
Score = 73.6 bits (179), Expect(3) = 1e-22
Identities = 37/50 (74%), Positives = 43/50 (86%)
Frame = -3
Query: 361 FCGTEYLTEQVESIKRISEYVAQLRRVGKGDGVWNFGQSLLNGAIKDAIA 212
F +EYLTEQVE+IK+ISEYVAQLRRVGKG GVW+F Q+LLNG DA+A
Sbjct: 230 FVESEYLTEQVEAIKKISEYVAQLRRVGKGHGVWHFDQALLNG---DAVA 276
Score = 52.4 bits (124), Expect(3) = 1e-22
Identities = 24/27 (88%), Positives = 25/27 (92%)
Frame = -2
Query: 539 ALRGLANFFKELSEEERQHAEKFMEYQ 459
AL+GLANFFKE SEEER HAEKFMEYQ
Sbjct: 141 ALKGLANFFKESSEEERDHAEKFMEYQ 167
Score = 25.8 bits (55), Expect(3) = 1e-22
Identities = 16/36 (44%), Positives = 17/36 (47%)
Frame = -1
Query: 459 AMGLAXXXXXXXXXXXXXLHQVATRNNVVQLADFVE 352
AM LA LH VA +N VQL DFVE
Sbjct: 197 AMELALSLEKLTNEKLLLLHSVAEKNKDVQLTDFVE 232
>gb|ABD66598.1| iron-binding protein [Pyrus pyrifolia]
Length = 307
Score = 70.1 bits (170), Expect(3) = 1e-21
Identities = 33/42 (78%), Positives = 38/42 (90%)
Frame = -3
Query: 361 FCGTEYLTEQVESIKRISEYVAQLRRVGKGDGVWNFGQSLLN 236
F +EYLTEQVE+IK+ISEYVAQLRRVGKG GVW+F Q+LLN
Sbjct: 266 FVESEYLTEQVEAIKKISEYVAQLRRVGKGHGVWHFDQALLN 307
Score = 52.4 bits (124), Expect(3) = 1e-21
Identities = 24/27 (88%), Positives = 25/27 (92%)
Frame = -2
Query: 539 ALRGLANFFKELSEEERQHAEKFMEYQ 459
AL+GLANFFKE SEEER HAEKFMEYQ
Sbjct: 177 ALKGLANFFKESSEEERDHAEKFMEYQ 203
Score = 25.8 bits (55), Expect(3) = 1e-21
Identities = 16/36 (44%), Positives = 17/36 (47%)
Frame = -1
Query: 459 AMGLAXXXXXXXXXXXXXLHQVATRNNVVQLADFVE 352
AM LA LH VA +N VQL DFVE
Sbjct: 233 AMELALSLEKLTNEKLLHLHSVAEKNKDVQLTDFVE 268
>gb|AFO70136.1| ferritin Fer14;1 [Glycine max]
Length = 247
Score = 67.8 bits (164), Expect(3) = 2e-21
Identities = 33/42 (78%), Positives = 36/42 (85%)
Frame = -3
Query: 361 FCGTEYLTEQVESIKRISEYVAQLRRVGKGDGVWNFGQSLLN 236
F TEYL EQVE+IKRISEYVAQLRRVGKG GVW+F Q LL+
Sbjct: 200 FVETEYLREQVEAIKRISEYVAQLRRVGKGHGVWHFDQMLLH 241
Score = 49.7 bits (117), Expect(3) = 2e-21
Identities = 23/27 (85%), Positives = 24/27 (88%)
Frame = -2
Query: 539 ALRGLANFFKELSEEERQHAEKFMEYQ 459
ALRGLA FFKE SEEER+HAEK MEYQ
Sbjct: 111 ALRGLAKFFKESSEEEREHAEKLMEYQ 137
Score = 30.0 bits (66), Expect(3) = 2e-21
Identities = 18/38 (47%), Positives = 20/38 (52%)
Frame = -1
Query: 465 ISAMGLAXXXXXXXXXXXXXLHQVATRNNVVQLADFVE 352
+ AM LA LH VAT+N VQLADFVE
Sbjct: 165 LHAMELALSLEKLTNEQLLNLHSVATKNGDVQLADFVE 202
>ref|NP_001237049.1| ferritin-4, chloroplastic [Glycine max]
gi|259016233|sp|Q948P5.2|FRI4_SOYBN RecName:
Full=Ferritin-4, chloroplastic; AltName: Full=SFerH-4;
Flags: Precursor gi|251733308|dbj|BAB64537.2| ferritin
[Glycine max] gi|255647970|gb|ACU24442.1| unknown
[Glycine max]
Length = 247
Score = 67.4 bits (163), Expect(3) = 2e-21
Identities = 33/42 (78%), Positives = 36/42 (85%)
Frame = -3
Query: 361 FCGTEYLTEQVESIKRISEYVAQLRRVGKGDGVWNFGQSLLN 236
F TEYL EQVE+IKRISEYVAQLRRVGKG GVW+F Q LL+
Sbjct: 200 FVETEYLGEQVEAIKRISEYVAQLRRVGKGHGVWHFDQMLLH 241
Score = 49.7 bits (117), Expect(3) = 2e-21
Identities = 23/27 (85%), Positives = 24/27 (88%)
Frame = -2
Query: 539 ALRGLANFFKELSEEERQHAEKFMEYQ 459
ALRGLA FFKE SEEER+HAEK MEYQ
Sbjct: 111 ALRGLAKFFKESSEEEREHAEKLMEYQ 137
Score = 30.0 bits (66), Expect(3) = 2e-21
Identities = 18/38 (47%), Positives = 20/38 (52%)
Frame = -1
Query: 465 ISAMGLAXXXXXXXXXXXXXLHQVATRNNVVQLADFVE 352
+ AM LA LH VAT+N VQLADFVE
Sbjct: 165 LHAMELALSLEKLTNEKLLNLHSVATKNGDVQLADFVE 202
>pdb|3A68|A Chain A, Crystal Structure Of Plant Ferritin Reveals A Novel Metal
Binding Site That Functions As A Transit Site For Metal
Transfer In Ferritin gi|270346418|pdb|3A68|B Chain B,
Crystal Structure Of Plant Ferritin Reveals A Novel
Metal Binding Site That Functions As A Transit Site For
Metal Transfer In Ferritin gi|270346419|pdb|3A68|C Chain
C, Crystal Structure Of Plant Ferritin Reveals A Novel
Metal Binding Site That Functions As A Transit Site For
Metal Transfer In Ferritin gi|270346420|pdb|3A68|D Chain
D, Crystal Structure Of Plant Ferritin Reveals A Novel
Metal Binding Site That Functions As A Transit Site For
Metal Transfer In Ferritin gi|270346421|pdb|3A68|E Chain
E, Crystal Structure Of Plant Ferritin Reveals A Novel
Metal Binding Site That Functions As A Transit Site For
Metal Transfer In Ferritin gi|270346422|pdb|3A68|F Chain
F, Crystal Structure Of Plant Ferritin Reveals A Novel
Metal Binding Site That Functions As A Transit Site For
Metal Transfer In Ferritin gi|270346423|pdb|3A68|G Chain
G, Crystal Structure Of Plant Ferritin Reveals A Novel
Metal Binding Site That Functions As A Transit Site For
Metal Transfer In Ferritin gi|270346424|pdb|3A68|H Chain
H, Crystal Structure Of Plant Ferritin Reveals A Novel
Metal Binding Site That Functions As A Transit Site For
Metal Transfer In Ferritin gi|270346425|pdb|3A68|I Chain
I, Crystal Structure Of Plant Ferritin Reveals A Novel
Metal Binding Site That Functions As A Transit Site For
Metal Transfer In Ferritin gi|270346426|pdb|3A68|J Chain
J, Crystal Structure Of Plant Ferritin Reveals A Novel
Metal Binding Site That Functions As A Transit Site For
Metal Transfer In Ferritin gi|270346427|pdb|3A68|K Chain
K, Crystal Structure Of Plant Ferritin Reveals A Novel
Metal Binding Site That Functions As A Transit Site For
Metal Transfer In Ferritin gi|270346428|pdb|3A68|L Chain
L, Crystal Structure Of Plant Ferritin Reveals A Novel
Metal Binding Site That Functions As A Transit Site For
Metal Transfer In Ferritin gi|270346429|pdb|3A68|M Chain
M, Crystal Structure Of Plant Ferritin Reveals A Novel
Metal Binding Site That Functions As A Transit Site For
Metal Transfer In Ferritin gi|270346430|pdb|3A68|N Chain
N, Crystal Structure Of Plant Ferritin Reveals A Novel
Metal Binding Site That Functions As A Transit Site For
Metal Transfer In Ferritin gi|270346431|pdb|3A68|O Chain
O, Crystal Structure Of Plant Ferritin Reveals A Novel
Metal Binding Site That Functions As A Transit Site For
Metal Transfer In Ferritin gi|270346432|pdb|3A68|P Chain
P, Crystal Structure Of Plant Ferritin Reveals A Novel
Metal Binding Site That Functions As A Transit Site For
Metal Transfer In Ferritin gi|270346433|pdb|3A68|Q Chain
Q, Crystal Structure Of Plant Ferritin Reveals A Novel
Metal Binding Site That Functions As A Transit Site For
Metal Transfer In Ferritin gi|270346434|pdb|3A68|R Chain
R, Crystal Structure Of Plant Ferritin Reveals A Novel
Metal Binding Site That Functions As A Transit Site For
Metal Transfer In Ferritin gi|270346435|pdb|3A68|S Chain
S, Crystal Structure Of Plant Ferritin Reveals A Novel
Metal Binding Site That Functions As A Transit Site For
Metal Transfer In Ferritin gi|270346436|pdb|3A68|T Chain
T, Crystal Structure Of Plant Ferritin Reveals A Novel
Metal Binding Site That Functions As A Transit Site For
Metal Transfer In Ferritin gi|270346437|pdb|3A68|U Chain
U, Crystal Structure Of Plant Ferritin Reveals A Novel
Metal Binding Site That Functions As A Transit Site For
Metal Transfer In Ferritin gi|270346438|pdb|3A68|V Chain
V, Crystal Structure Of Plant Ferritin Reveals A Novel
Metal Binding Site That Functions As A Transit Site For
Metal Transfer In Ferritin gi|270346439|pdb|3A68|W Chain
W, Crystal Structure Of Plant Ferritin Reveals A Novel
Metal Binding Site That Functions As A Transit Site For
Metal Transfer In Ferritin gi|270346440|pdb|3A68|X Chain
X, Crystal Structure Of Plant Ferritin Reveals A Novel
Metal Binding Site That Functions As A Transit Site For
Metal Transfer In Ferritin
Length = 212
Score = 67.4 bits (163), Expect(3) = 2e-21
Identities = 33/42 (78%), Positives = 36/42 (85%)
Frame = -3
Query: 361 FCGTEYLTEQVESIKRISEYVAQLRRVGKGDGVWNFGQSLLN 236
F TEYL EQVE+IKRISEYVAQLRRVGKG GVW+F Q LL+
Sbjct: 165 FVETEYLGEQVEAIKRISEYVAQLRRVGKGHGVWHFDQMLLH 206
Score = 49.7 bits (117), Expect(3) = 2e-21
Identities = 23/27 (85%), Positives = 24/27 (88%)
Frame = -2
Query: 539 ALRGLANFFKELSEEERQHAEKFMEYQ 459
ALRGLA FFKE SEEER+HAEK MEYQ
Sbjct: 76 ALRGLAKFFKESSEEEREHAEKLMEYQ 102
Score = 30.0 bits (66), Expect(3) = 2e-21
Identities = 18/38 (47%), Positives = 20/38 (52%)
Frame = -1
Query: 465 ISAMGLAXXXXXXXXXXXXXLHQVATRNNVVQLADFVE 352
+ AM LA LH VAT+N VQLADFVE
Sbjct: 130 LHAMELALSLEKLTNEKLLNLHSVATKNGDVQLADFVE 167