BLASTX nr result
ID: Coptis24_contig00019199
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00019199
(672 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002332820.1| cc-nbs-lrr resistance protein [Populus trich... 117 1e-31
ref|XP_002332822.1| cc-nbs-lrr resistance protein [Populus trich... 110 3e-30
ref|XP_002332743.1| cc-nbs-lrr resistance protein [Populus trich... 111 2e-28
ref|XP_002335033.1| predicted protein [Populus trichocarpa] gi|2... 107 2e-28
ref|XP_002331783.1| cc-nbs-lrr resistance protein [Populus trich... 103 8e-28
>ref|XP_002332820.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
gi|222834208|gb|EEE72685.1| cc-nbs-lrr resistance
protein [Populus trichocarpa]
Length = 655
Score = 117 bits (293), Expect(2) = 1e-31
Identities = 60/145 (41%), Positives = 89/145 (61%), Gaps = 3/145 (2%)
Frame = +1
Query: 244 ASIRLSYDFLQDETTKMCFLFCCMFPEDFEIPTDVLFGYMMGEKLIRDVDTFEEARNRLQ 423
A ++LSYD+L+ + TK+CFL CC+FPED+ IP + L Y +G +L +DV++ +AR R+
Sbjct: 387 ACLKLSYDYLKSKETKLCFLLCCLFPEDYHIPIEDLTRYAVGYELHQDVESIGDARKRVY 446
Query: 424 ATVEKLTSAGLLLKVD-DGRIMMHDVVRDVAVSIACEQRNEFIVKAKMSFDEWP--DMEL 594
++KL +LL + D + MHD+VRDVA+ IA Q FI+KA + EWP
Sbjct: 447 VEIKKLKDCCMLLDTETDEHVKMHDLVRDVAIRIASSQEYGFIIKAGIGLKEWPMSIKSF 506
Query: 595 EKCKRLSLMDTKIIRYHLPSQIKAP 669
E C +SLM K+ LP ++ P
Sbjct: 507 EACTTISLMGNKLT--ELPEGLECP 529
Score = 45.4 bits (106), Expect(2) = 1e-31
Identities = 20/41 (48%), Positives = 31/41 (75%)
Frame = +3
Query: 12 TVAGNIVKECKGLPLAIVTLGLALRNKDEISVWEDTLKRLK 134
TVA + +EC+GLP+A+VT+G+ALR+K + WE + +LK
Sbjct: 330 TVAREVARECQGLPIALVTVGMALRDKSAVE-WEVAIGQLK 369
>ref|XP_002332822.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
gi|222834210|gb|EEE72687.1| cc-nbs-lrr resistance
protein [Populus trichocarpa]
Length = 817
Score = 110 bits (275), Expect(2) = 3e-30
Identities = 57/145 (39%), Positives = 87/145 (60%), Gaps = 3/145 (2%)
Frame = +1
Query: 244 ASIRLSYDFLQDETTKMCFLFCCMFPEDFEIPTDVLFGYMMGEKLIRDVDTFEEARNRLQ 423
A ++LSYD+L+ + TK+CFL CC+FPED+ IP + L Y +G L +D + E+AR ++
Sbjct: 222 ACLKLSYDYLKSKETKLCFLLCCLFPEDYNIPIEDLTRYAVGYGLHQDGEPIEDAREQVH 281
Query: 424 ATVEKLTSAGLLLKVD-DGRIMMHDVVRDVAVSIACEQRNEFIVKAKMSFDEWP--DMEL 594
+E L + LLL + + + MHD+VRDVA+ IA + F+VK + EWP +
Sbjct: 282 VAIEYLKACCLLLGTETEEHVRMHDLVRDVAIQIASSEEYGFMVKVGIGLKEWPMSNKSF 341
Query: 595 EKCKRLSLMDTKIIRYHLPSQIKAP 669
E C +SLM K+ + LP + P
Sbjct: 342 EGCTTISLMGNKLAK--LPEGLVCP 364
Score = 47.4 bits (111), Expect(2) = 3e-30
Identities = 23/41 (56%), Positives = 31/41 (75%)
Frame = +3
Query: 12 TVAGNIVKECKGLPLAIVTLGLALRNKDEISVWEDTLKRLK 134
TVA + +ECKGLP+A+VTLG ALR+K E + W+ K+LK
Sbjct: 166 TVARKVARECKGLPIALVTLGRALRDKSE-NQWKRVSKQLK 205
>ref|XP_002332743.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
gi|222833055|gb|EEE71532.1| cc-nbs-lrr resistance
protein [Populus trichocarpa]
Length = 656
Score = 111 bits (277), Expect(2) = 2e-28
Identities = 56/133 (42%), Positives = 83/133 (62%), Gaps = 3/133 (2%)
Frame = +1
Query: 244 ASIRLSYDFLQDETTKMCFLFCCMFPEDFEIPTDVLFGYMMGEKLIRDVDTFEEARNRLQ 423
A ++LSYD+L+ E TK+CFL CC+FPED+ IP + L Y +G L +DV + E AR R+
Sbjct: 387 ACLKLSYDYLKHEETKLCFLLCCLFPEDYNIPIEELTRYAVGYGLYQDVQSIEGARKRVY 446
Query: 424 ATVEKLTSAGLLLKVD-DGRIMMHDVVRDVAVSIACEQRNEFIVKAKMSFDEWP--DMEL 594
+E L + +LL + + + MHD+VRDVA+ IA ++ F+V+A EWP +
Sbjct: 447 MEIENLKACCMLLGTETEEYVKMHDLVRDVAIQIASSEKYGFMVEAGFGLKEWPMRNKRF 506
Query: 595 EKCKRLSLMDTKI 633
E C +SLM K+
Sbjct: 507 EGCTVVSLMGNKL 519
Score = 40.8 bits (94), Expect(2) = 2e-28
Identities = 20/40 (50%), Positives = 28/40 (70%)
Frame = +3
Query: 15 VAGNIVKECKGLPLAIVTLGLALRNKDEISVWEDTLKRLK 134
VA + +EC+GLPLA+VT+G AL++K E WE + LK
Sbjct: 331 VAKEVARECQGLPLALVTVGKALKDKSE-HEWEVASEELK 369
>ref|XP_002335033.1| predicted protein [Populus trichocarpa] gi|222832660|gb|EEE71137.1|
predicted protein [Populus trichocarpa]
Length = 367
Score = 107 bits (266), Expect(2) = 2e-28
Identities = 55/143 (38%), Positives = 84/143 (58%), Gaps = 3/143 (2%)
Frame = +1
Query: 250 IRLSYDFLQDETTKMCFLFCCMFPEDFEIPTDVLFGYMMGEKLIRDVDTFEEARNRLQAT 429
++LSYD+L+ E TK CF+ CC+FPED++IP + L Y +G L +D + E+AR R+
Sbjct: 77 LKLSYDYLKYEETKSCFVLCCLFPEDYDIPIEDLTRYAVGYGLHQDAEPIEDARKRVSVA 136
Query: 430 VEKLTSAGLLLKVD-DGRIMMHDVVRDVAVSIACEQRNEFIVKAKMSFDEWP--DMELEK 600
+E L +LL + + + MHD+VRD A+ IA + FIVKA + ++W + E
Sbjct: 137 IENLKDCCMLLGTETEEHVRMHDLVRDFAIQIASSEEYGFIVKAGIGLEKWAMRNKSFEG 196
Query: 601 CKRLSLMDTKIIRYHLPSQIKAP 669
C +SLM K+ LP + P
Sbjct: 197 CTTISLMGNKLA--ELPEGLVCP 217
Score = 45.1 bits (105), Expect(2) = 2e-28
Identities = 21/41 (51%), Positives = 29/41 (70%)
Frame = +3
Query: 12 TVAGNIVKECKGLPLAIVTLGLALRNKDEISVWEDTLKRLK 134
TVA + +EC+GLP+A+VT+G ALR K + WE K+LK
Sbjct: 18 TVAREVARECQGLPIALVTVGRALRGKSRVQ-WEVASKQLK 57
>ref|XP_002331783.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
gi|222832242|gb|EEE70719.1| cc-nbs-lrr resistance
protein [Populus trichocarpa]
Length = 1078
Score = 103 bits (256), Expect(2) = 8e-28
Identities = 56/145 (38%), Positives = 83/145 (57%), Gaps = 3/145 (2%)
Frame = +1
Query: 244 ASIRLSYDFLQDETTKMCFLFCCMFPEDFEIPTDVLFGYMMGEKLIRDVDTFEEARNRLQ 423
A ++LSYD+L+ + TK+CFL CC+FPED+ IP + L Y +G + E+AR R+
Sbjct: 389 ACLKLSYDYLKSKETKLCFLICCLFPEDYNIPIEDLTRYAVGYLI-------EDARKRVS 441
Query: 424 ATVEKLTSAGLLLKVD-DGRIMMHDVVRDVAVSIACEQRNEFIVKAKMSFDEWP--DMEL 594
+E L +LL + + + MHD+VRDVA+ IA + F+VKA + EWP +
Sbjct: 442 VAIENLKDCCMLLGTETEEHVRMHDLVRDVAIRIASSKEYGFMVKAGIGLKEWPMSNKSF 501
Query: 595 EKCKRLSLMDTKIIRYHLPSQIKAP 669
E C +SLM K+ LP + P
Sbjct: 502 EGCTTISLMGNKLA--ELPEGLVCP 524
Score = 46.6 bits (109), Expect(2) = 8e-28
Identities = 21/41 (51%), Positives = 30/41 (73%)
Frame = +3
Query: 12 TVAGNIVKECKGLPLAIVTLGLALRNKDEISVWEDTLKRLK 134
TVA + +EC+GLP+A+VT+G ALR K E+ WE ++LK
Sbjct: 332 TVAREVARECQGLPIALVTVGRALRGKSEVE-WEVAFRQLK 371