BLASTX nr result
ID: Coptis24_contig00019198
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00019198
(2173 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002528625.1| threonine dehydratase/deaminase, putative [R... 723 0.0
ref|XP_002264311.2| PREDICTED: threonine dehydratase biosyntheti... 719 0.0
ref|XP_002326230.1| predicted protein [Populus trichocarpa] gi|2... 717 0.0
gb|AEQ28336.1| threonine deaminase [Lemna minor] 713 0.0
gb|ABR18075.1| unknown [Picea sitchensis] 708 0.0
>ref|XP_002528625.1| threonine dehydratase/deaminase, putative [Ricinus communis]
gi|223531914|gb|EEF33728.1| threonine
dehydratase/deaminase, putative [Ricinus communis]
Length = 618
Score = 723 bits (1866), Expect = 0.0
Identities = 377/561 (67%), Positives = 446/561 (79%), Gaps = 2/561 (0%)
Frame = -3
Query: 2009 TFKTSSQNVTATSSVEKLPLSSASLNKVAADSLQYETGFLGAVPEKLKEDD--DGCPSAL 1836
T T+S + TSS +SS LNKV+ +SLQY G+LGAVP++ ++ + +A+
Sbjct: 60 TNSTTSSAASTTSSSSSTTVSSIFLNKVSPNSLQYPPGYLGAVPDRAVNNNGANDIINAM 119
Query: 1835 WYLTSILSSKVYDVAIESPLDHAKKLSDRLGVKFLLKREDLQPVFSFKLRGAYNMMAKLP 1656
YLT+ILSSKVYDVAIESPL A KLS+RL VK LKREDLQPVFSFKLRGAYNMMAKL
Sbjct: 120 GYLTNILSSKVYDVAIESPLQFAPKLSERLKVKVWLKREDLQPVFSFKLRGAYNMMAKLS 179
Query: 1655 RDQLDRGVICSSAGNHAQGVALAARKLGCDAVIVMPVTTPGIKVESVQKLGATVVLKGDS 1476
++QL++GVICSSAGNHAQGVALAA++LGC+AVI MP+TTP IK +SV++LGATVVL GDS
Sbjct: 180 KEQLEKGVICSSAGNHAQGVALAAKRLGCNAVIAMPITTPEIKWQSVERLGATVVLVGDS 239
Query: 1475 YDEAQAHAKQRSDLEGRTFIPPFDHPDVIAGQGTVGLEILRQANGPLYAVFVPVXXXXXX 1296
YDEAQ +AK+R+ EGRTFIPPFDHPDVI GQGTVG+EI+RQ P++A+FVPV
Sbjct: 240 YDEAQTYAKKRAKEEGRTFIPPFDHPDVIMGQGTVGMEIVRQIQAPMHAIFVPVGGGGLI 299
Query: 1295 XXXXXXIKQVAPEVKIIGVEPADANALALSFHHGQRVMLEQAGGFADGVAVKVVGEETFR 1116
+K+V PEVKIIGVEP+DANA+ALS HHG+RVML+Q GGFADGVAVK VGEETFR
Sbjct: 300 AGIAAYVKRVNPEVKIIGVEPSDANAMALSLHHGERVMLDQVGGFADGVAVKEVGEETFR 359
Query: 1115 LCRELVDGVVLVSKDAICASIKDMFEEKRSXXXXXXXXXXXXXXAYCKYYGLKNETVVAI 936
LC+EL+DGVVLVS+DAICASIKDMFEEKRS AYCKYYGL+ + VVAI
Sbjct: 360 LCKELIDGVVLVSRDAICASIKDMFEEKRSILEPAGALALAGAEAYCKYYGLEGKNVVAI 419
Query: 935 ASGANMNFSTLKLVAELADIGRQREAVLSTCMPEEPGSFKRFCELVGPKMNITEFKYRCD 756
SGANMNF L++V ELA++GRQ+EAVL+T MPEEPG FKRFCELVGP MNITEFKYRC
Sbjct: 420 TSGANMNFDKLRIVTELANVGRQQEAVLATVMPEEPGMFKRFCELVGP-MNITEFKYRCS 478
Query: 755 GTDKAVVLYSVGLHTVSELTALVNRMEYSQLETENYTSNGLVKDHLRHLIGSGRSMLPRD 576
+AVVLYSVGLHTV E+ AL RME SQL T N TS+ LVKDHLR+L+G ++ ++
Sbjct: 479 SEKEAVVLYSVGLHTVFEIQALQQRMEASQLRTYNLTSSDLVKDHLRYLMGGRLNV--QN 536
Query: 575 ERLFRFVFPERPGALMKFLDAFSPRWNISLFHYRAQGETGANVLVGMQVLDSELDEFHSC 396
E L +FVFPERPGALMKFLDAFSPRWNISLFHYR QGETGAN+LVG+QV +SE++EFHS
Sbjct: 537 EVLCQFVFPERPGALMKFLDAFSPRWNISLFHYRGQGETGANILVGIQVPESEMEEFHSR 596
Query: 395 ANCLGFDYTDETYNPGRDLLM 333
AN +G+ Y T + LLM
Sbjct: 597 ANSVGYGYVVVTDDNNFQLLM 617
>ref|XP_002264311.2| PREDICTED: threonine dehydratase biosynthetic, chloroplastic-like
[Vitis vinifera] gi|297740025|emb|CBI30207.3| unnamed
protein product [Vitis vinifera]
Length = 606
Score = 719 bits (1857), Expect = 0.0
Identities = 384/571 (67%), Positives = 450/571 (78%), Gaps = 4/571 (0%)
Frame = -3
Query: 2033 IKSAITNPTFKTS-SQNVTATSSVEKL-PLSSASLNKVAADSLQYETGFLGAVPEKLKED 1860
IK+ I+ P + S + + T TSS L P L +V++DSLQY+ G +GAVP++ D
Sbjct: 38 IKATISKPAAEISGTSSTTVTSSQTSLHPSPVPPLKRVSSDSLQYQPGCIGAVPDRTIHD 97
Query: 1859 D-DGCPSALWYLTSILSSKVYDVAIESPLDHAKKLSDRLGVKFLLKREDLQPVFSFKLRG 1683
DG A+ YLT+ILSSKVYDVAIESPL A KLS+RLG + LKREDLQPVFSFKLRG
Sbjct: 98 GIDGVVGAMEYLTNILSSKVYDVAIESPLQLAPKLSERLGAQIWLKREDLQPVFSFKLRG 157
Query: 1682 AYNMMAKLPRDQLDRGVICSSAGNHAQGVALAARKLGCDAVIVMPVTTPGIKVESVQKLG 1503
AYNMMAK+P++QL+RGVICSSAGNHAQGVALAA++LGC+AVI MPVTTP IK +SV++LG
Sbjct: 158 AYNMMAKIPKEQLERGVICSSAGNHAQGVALAAKRLGCNAVIAMPVTTPEIKWKSVERLG 217
Query: 1502 ATVVLKGDSYDEAQAHAKQRSDLEGRTFIPPFDHPDVIAGQGTVGLEILRQANGPLYAVF 1323
ATVVL GDSYDEAQA+AKQR + E RTFIPPFDHPDVI GQGT+G+EI+RQ GPL A+F
Sbjct: 218 ATVVLVGDSYDEAQAYAKQRGEEECRTFIPPFDHPDVIMGQGTIGMEIVRQMQGPLDAIF 277
Query: 1322 VPVXXXXXXXXXXXXIKQVAPEVKIIGVEPADANALALSFHHGQRVMLEQAGGFADGVAV 1143
VPV +K+V+PEVKIIGVEP DANA+ALS HH QRVML+Q GGFADGVAV
Sbjct: 278 VPVGGGGLIAGIAAYVKRVSPEVKIIGVEPCDANAMALSLHHDQRVMLDQVGGFADGVAV 337
Query: 1142 KVVGEETFRLCRELVDGVVLVSKDAICASIKDMFEEKRSXXXXXXXXXXXXXXAYCKYYG 963
KVVGEETFRLCREL+DG+VLVS+DAICASIK+MFEEKRS AYCKYYG
Sbjct: 338 KVVGEETFRLCRELIDGIVLVSRDAICASIKNMFEEKRSILEPAGALALAGAEAYCKYYG 397
Query: 962 LKNETVVAIASGANMNFSTLKLVAELADIGRQREAVLSTCMPEEPGSFKRFCELVGPKMN 783
+K +VAI SGANMNF L+LV ELAD+GRQREAVL+T +PEEPGSFK+FCE+VG MN
Sbjct: 398 IKGGNIVAITSGANMNFDRLRLVTELADVGRQREAVLATLLPEEPGSFKQFCEMVG-HMN 456
Query: 782 ITEFKYRCD-GTDKAVVLYSVGLHTVSELTALVNRMEYSQLETENYTSNGLVKDHLRHLI 606
ITEFKYR + +KA+VLYSVGLHTV EL+A+V RME SQL T N T++ LVKDHLRHL+
Sbjct: 457 ITEFKYRYNPHKEKALVLYSVGLHTVLELSAMVERMESSQLTTLNLTNDDLVKDHLRHLM 516
Query: 605 GSGRSMLPRDERLFRFVFPERPGALMKFLDAFSPRWNISLFHYRAQGETGANVLVGMQVL 426
G GRS + +E L RFVFPERPG LMKFLD FSPRWNISLFHYR QGE GANVLVG+QV
Sbjct: 517 G-GRSHV-ENELLCRFVFPERPGTLMKFLDTFSPRWNISLFHYRGQGEAGANVLVGIQVP 574
Query: 425 DSELDEFHSCANCLGFDYTDETYNPGRDLLM 333
++E+ EF A+ LG++Y ET N LLM
Sbjct: 575 ETEMTEFKRRADALGYEYAVETSNKAYLLLM 605
>ref|XP_002326230.1| predicted protein [Populus trichocarpa] gi|222833423|gb|EEE71900.1|
predicted protein [Populus trichocarpa]
Length = 543
Score = 717 bits (1851), Expect = 0.0
Identities = 380/535 (71%), Positives = 431/535 (80%), Gaps = 2/535 (0%)
Frame = -3
Query: 1931 KVAADSLQYETGFLGAVPEKLKEDDDG--CPSALWYLTSILSSKVYDVAIESPLDHAKKL 1758
KV+A+SLQY +G+LGAVPE+ D D +A+ YLT+ILSSKVYDVAIESPL A KL
Sbjct: 11 KVSANSLQYPSGYLGAVPERTVNDGDNESIINAMEYLTNILSSKVYDVAIESPLQLAPKL 70
Query: 1757 SDRLGVKFLLKREDLQPVFSFKLRGAYNMMAKLPRDQLDRGVICSSAGNHAQGVALAARK 1578
S+RLGVK LKREDLQPVFSFKLRGAYNMMAKLP++QL RGVICSSAGNHAQGVALAA++
Sbjct: 71 SERLGVKVWLKREDLQPVFSFKLRGAYNMMAKLPKEQLQRGVICSSAGNHAQGVALAAKR 130
Query: 1577 LGCDAVIVMPVTTPGIKVESVQKLGATVVLKGDSYDEAQAHAKQRSDLEGRTFIPPFDHP 1398
LGCDAVI MPVTTP IK +SV++LGATVVL GDSYDEAQ +AK+R+ E RTFIPPFDHP
Sbjct: 131 LGCDAVIAMPVTTPEIKWQSVERLGATVVLVGDSYDEAQTYAKKRAKEEDRTFIPPFDHP 190
Query: 1397 DVIAGQGTVGLEILRQANGPLYAVFVPVXXXXXXXXXXXXIKQVAPEVKIIGVEPADANA 1218
DVI GQGTVG+EI+RQ GPL+A+FVPV +K+V PEVKIIGVEP+DANA
Sbjct: 191 DVIMGQGTVGMEIVRQMQGPLHAIFVPVGGGGLIAGIAAYVKRVNPEVKIIGVEPSDANA 250
Query: 1217 LALSFHHGQRVMLEQAGGFADGVAVKVVGEETFRLCRELVDGVVLVSKDAICASIKDMFE 1038
+ALS HHGQRVML+Q GGFADGVAVK VGEETFRLC+ELVDGVVLVS+DAICASIKDMFE
Sbjct: 251 MALSLHHGQRVMLDQVGGFADGVAVKEVGEETFRLCKELVDGVVLVSRDAICASIKDMFE 310
Query: 1037 EKRSXXXXXXXXXXXXXXAYCKYYGLKNETVVAIASGANMNFSTLKLVAELADIGRQREA 858
EKRS AYCKYYG+K VVAI SGANMNF L++V ELA++GRQ+EA
Sbjct: 311 EKRSILEPAGALALAGAEAYCKYYGVKGANVVAITSGANMNFDKLRVVTELANVGRQQEA 370
Query: 857 VLSTCMPEEPGSFKRFCELVGPKMNITEFKYRCDGTDKAVVLYSVGLHTVSELTALVNRM 678
+L+T MPE PGSFK FCELVGP MNI+EFKYR + AVVLYSVGLHT EL A+ RM
Sbjct: 371 LLATVMPEVPGSFKHFCELVGP-MNISEFKYRSNSEKDAVVLYSVGLHTAFELEAMKKRM 429
Query: 677 EYSQLETENYTSNGLVKDHLRHLIGSGRSMLPRDERLFRFVFPERPGALMKFLDAFSPRW 498
E SQL T N T++ LVKDHLR+LIG G+ +P DE L RFVFPERPGALMKFLD+FSPRW
Sbjct: 430 ESSQLRTYNLTASDLVKDHLRYLIG-GKLNVP-DEVLCRFVFPERPGALMKFLDSFSPRW 487
Query: 497 NISLFHYRAQGETGANVLVGMQVLDSELDEFHSCANCLGFDYTDETYNPGRDLLM 333
NISLFHYR QGETGANVLVG+QV SE+DEF S AN LG+DY T + LLM
Sbjct: 488 NISLFHYRGQGETGANVLVGIQVPQSEMDEFCSRANSLGYDYVVVTDDNDFHLLM 542
>gb|AEQ28336.1| threonine deaminase [Lemna minor]
Length = 652
Score = 713 bits (1841), Expect = 0.0
Identities = 390/633 (61%), Positives = 463/633 (73%), Gaps = 32/633 (5%)
Frame = -3
Query: 2135 PATNMKTCTTFSSSPLTRV-----HSSPSLFLHKP------RVLSIKSAITNPTFKTSSQ 1989
PA++ TC T S SP + + PS + H R SA+ +F + S
Sbjct: 23 PASSAATCCTMSRSPSISLKRCSCYRYPSRYSHGIPSDGGIRGKLTSSAVPAASFASPST 82
Query: 1988 NVTATSSVEKLPLSSASLN----------KVAADSLQYETGFLGAVPEKLKED------- 1860
A S PLS+ S++ KV DSLQYE+G+LG + K +
Sbjct: 83 TADAPSDAATAPLSTPSVSSEASAEVELMKVTTDSLQYESGYLGGISGKTRPSWGTSWTS 142
Query: 1859 ---DDGCPSALWYLTSILSSKVYDVAIESPLDHAKKLSDRLGVKFLLKREDLQPVFSFKL 1689
PSA+ YL L+S+VYDVAIESPL A +LS+RLGV+F LKREDLQPVFSFKL
Sbjct: 143 SPSSFDRPSAMDYLAHTLTSRVYDVAIESPLQLAPRLSERLGVQFWLKREDLQPVFSFKL 202
Query: 1688 RGAYNMMAKLPRDQLDRGVICSSAGNHAQGVALAARKLGCDAVIVMPVTTPGIKVESVQK 1509
RGAYNMMA LPR++L++GVICSSAGNHAQGVALAA+KLGC+AVIVMPVTTP IK +SV+K
Sbjct: 203 RGAYNMMANLPREKLEKGVICSSAGNHAQGVALAAQKLGCNAVIVMPVTTPEIKWKSVEK 262
Query: 1508 LGATVVLKGDSYDEAQAHAKQRSDLEGRTFIPPFDHPDVIAGQGTVGLEILRQANGPLYA 1329
LGATVVL GDSYDEAQ+HAK+R+ EGRTFIPPFD+P+VI GQGTVG+EI+RQ GP++A
Sbjct: 263 LGATVVLVGDSYDEAQSHAKKRAKSEGRTFIPPFDNPNVIMGQGTVGMEIIRQLRGPIHA 322
Query: 1328 VFVPVXXXXXXXXXXXXIKQVAPEVKIIGVEPADANALALSFHHGQRVMLEQAGGFADGV 1149
+FVPV +KQV PEVKIIGVEP DANA+ALS HHGQRVMLEQ GGFADGV
Sbjct: 323 IFVPV-GGGLIAGIAAYVKQVRPEVKIIGVEPYDANAMALSLHHGQRVMLEQVGGFADGV 381
Query: 1148 AVKVVGEETFRLCRELVDGVVLVSKDAICASIKDMFEEKRSXXXXXXXXXXXXXXAYCKY 969
AVKVVGEET+RLCRELVDG+VLVS+DAICASIKDMFEEKRS AYCKY
Sbjct: 382 AVKVVGEETYRLCRELVDGIVLVSRDAICASIKDMFEEKRSILEPAGALSLAGAEAYCKY 441
Query: 968 YGLKNETVVAIASGANMNFSTLKLVAELADIGRQREAVLSTCMPEEPGSFKRFCELVGPK 789
YGLK E+VVAI SGANMNF L+LV ELAD+GR++EAVL+T MPEEPGSFKRFC+LVGP
Sbjct: 442 YGLKGESVVAITSGANMNFDRLRLVTELADVGRKQEAVLATSMPEEPGSFKRFCQLVGP- 500
Query: 788 MNITEFKYRCDGT-DKAVVLYSVGLHTVSELTALVNRMEYSQLETENYTSNGLVKDHLRH 612
+NITEFKYR D + +KA+VLYSVG+HT +EL ++V RM + ET + T+N L KDHLRH
Sbjct: 501 VNITEFKYRYDASKEKALVLYSVGVHTAAELKSVVGRMGFENFETVDLTNNDLAKDHLRH 560
Query: 611 LIGSGRSMLPRDERLFRFVFPERPGALMKFLDAFSPRWNISLFHYRAQGETGANVLVGMQ 432
L+G GR+ + +E L RF+FPERPG LMKFLD+FSPRWNISLFHYR+QGE GANVLVG+Q
Sbjct: 561 LVG-GRTNV-ENELLCRFIFPERPGTLMKFLDSFSPRWNISLFHYRSQGEAGANVLVGIQ 618
Query: 431 VLDSELDEFHSCANCLGFDYTDETYNPGRDLLM 333
V E+DEF + A L +DY E N LLM
Sbjct: 619 VPGGEMDEFRAIATNLDYDYALEMSNKAYQLLM 651
>gb|ABR18075.1| unknown [Picea sitchensis]
Length = 652
Score = 708 bits (1827), Expect = 0.0
Identities = 377/561 (67%), Positives = 445/561 (79%), Gaps = 6/561 (1%)
Frame = -3
Query: 1997 SSQNVTATSSVEKLPLSSASLNKVAADSLQYETGFLGAVPEKLKE-----DDDGCPSALW 1833
+S++ T TSS + LPL KV+++SLQYE+G+LGA+ +K + + +G P+ +
Sbjct: 99 TSESATPTSSRDPLPLL-----KVSSESLQYESGYLGAISDKTSDPHSDTNGNGGPTNVS 153
Query: 1832 YLTSILSSKVYDVAIESPLDHAKKLSDRLGVKFLLKREDLQPVFSFKLRGAYNMMAKLPR 1653
YLTSILSSKVY+VAIESPL +A K+S R GV+ LLKREDLQPVFSFKLRGAYNMMAKLP+
Sbjct: 154 YLTSILSSKVYEVAIESPLQYAPKISQRSGVRILLKREDLQPVFSFKLRGAYNMMAKLPK 213
Query: 1652 DQLDRGVICSSAGNHAQGVALAARKLGCDAVIVMPVTTPGIKVESVQKLGATVVLKGDSY 1473
+QL++GVICSSAGNHAQGVALAA +L C+AVIVMPVTTP IK +SV++LGATVVL GDSY
Sbjct: 214 EQLEKGVICSSAGNHAQGVALAAERLKCNAVIVMPVTTPEIKWKSVERLGATVVLIGDSY 273
Query: 1472 DEAQAHAKQRSDLEGRTFIPPFDHPDVIAGQGTVGLEILRQANGPLYAVFVPVXXXXXXX 1293
DEAQ +AK+RS+ EGR FIPPFDHPDVI GQGT+G+EI+ Q GPL+AVFVPV
Sbjct: 274 DEAQTYAKRRSEEEGRIFIPPFDHPDVIIGQGTIGMEIVHQNPGPLHAVFVPVGGGGLIA 333
Query: 1292 XXXXXIKQVAPEVKIIGVEPADANALALSFHHGQRVMLEQAGGFADGVAVKVVGEETFRL 1113
+KQV PEV+IIGVEPADANA+ALS + GQRVML+Q GGFADGVAVKVVGEETFRL
Sbjct: 334 GIAAYMKQVRPEVRIIGVEPADANAMALSLYRGQRVMLDQVGGFADGVAVKVVGEETFRL 393
Query: 1112 CRELVDGVVLVSKDAICASIKDMFEEKRSXXXXXXXXXXXXXXAYCKYYGLKNETVVAIA 933
CRELVDG+VLVS+DAICASIKDMFEEKRS AYCKYYGLK+ETVVAI
Sbjct: 394 CRELVDGIVLVSRDAICASIKDMFEEKRSILEPAGALALAGANAYCKYYGLKDETVVAIT 453
Query: 932 SGANMNFSTLKLVAELADIGRQREAVLSTCMPEEPGSFKRFCELVGPKMNITEFKYRCD- 756
SGANMNF L+LV +LAD+G +REAVL+T + EE GSFK FC+LVGP +NITEFKYR D
Sbjct: 454 SGANMNFERLRLVTQLADVGAKREAVLATFLQEEHGSFKNFCQLVGP-INITEFKYRYDI 512
Query: 755 GTDKAVVLYSVGLHTVSELTALVNRMEYSQLETENYTSNGLVKDHLRHLIGSGRSMLPRD 576
G DKA+VLYSVG+H EL A+ +R+E S L T + T N L KDHLRHL+G GRS L +
Sbjct: 513 GKDKALVLYSVGVHKAEELIAMKDRLESSGLRTLDLTDNDLAKDHLRHLMG-GRSNL-EN 570
Query: 575 ERLFRFVFPERPGALMKFLDAFSPRWNISLFHYRAQGETGANVLVGMQVLDSELDEFHSC 396
E L+RFVFPERPGALMKFLDAFSPRWNISLFHYRAQG+TGANVLVG+QV + +EF
Sbjct: 571 ELLYRFVFPERPGALMKFLDAFSPRWNISLFHYRAQGDTGANVLVGIQVPKEDEEEFIGQ 630
Query: 395 ANCLGFDYTDETYNPGRDLLM 333
A LG+++ DE N LLM
Sbjct: 631 AKTLGYEFKDERKNKAYRLLM 651