BLASTX nr result

ID: Coptis24_contig00019193 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019193
         (384 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320951.1| predicted protein [Populus trichocarpa] gi|2...   184   5e-45
ref|XP_002301538.1| predicted protein [Populus trichocarpa] gi|2...   183   1e-44
ref|XP_002279985.1| PREDICTED: uncharacterized protein LOC100253...   180   9e-44
gb|ABK92443.1| unknown [Populus trichocarpa]                          180   9e-44
ref|XP_003591333.1| hypothetical protein MTR_1g086330 [Medicago ...   175   4e-42

>ref|XP_002320951.1| predicted protein [Populus trichocarpa] gi|222861724|gb|EEE99266.1|
           predicted protein [Populus trichocarpa]
          Length = 247

 Score =  184 bits (468), Expect = 5e-45
 Identities = 75/128 (58%), Positives = 94/128 (73%)
 Frame = -1

Query: 384 QTCAGASMLTDIVFWCLLLPFQSDGNFSLNLLMGAMHGXXXXXXXXXXXXXXLPFPWFRV 205
           QTCAGA +LTDIVFWC+++PF S+ +  LN+LMG MH               LPFPWFR+
Sbjct: 110 QTCAGAIVLTDIVFWCVIVPFLSNTHLGLNVLMGCMHSLNAFFLLLDTVLNSLPFPWFRI 169

Query: 204 AYFVFWSCTYILFQWILHASGVSWWPYAFLELSTPWAPMWYLAIALIHLPCFGFYVLVVK 25
           AYFV WSC Y++FQWI+HA G SWWPY FLEL TPW+P+WY  +AL+H+PC+G Y L+ K
Sbjct: 170 AYFVLWSCLYVIFQWIIHACGFSWWPYPFLELDTPWSPLWYFLVALMHIPCYGIYALIFK 229

Query: 24  VKNSIFSR 1
            KN+IF R
Sbjct: 230 AKNAIFPR 237


>ref|XP_002301538.1| predicted protein [Populus trichocarpa] gi|222843264|gb|EEE80811.1|
           predicted protein [Populus trichocarpa]
          Length = 320

 Score =  183 bits (464), Expect = 1e-44
 Identities = 74/128 (57%), Positives = 95/128 (74%)
 Frame = -1

Query: 384 QTCAGASMLTDIVFWCLLLPFQSDGNFSLNLLMGAMHGXXXXXXXXXXXXXXLPFPWFRV 205
           QTCAGA +LTDI+FWC+++PF S+ +  LN LMG MH               LPFPWFR+
Sbjct: 183 QTCAGAVILTDIIFWCIIVPFLSNTHLGLNALMGCMHSLNAVFLLLDTALNSLPFPWFRL 242

Query: 204 AYFVFWSCTYILFQWILHASGVSWWPYAFLELSTPWAPMWYLAIALIHLPCFGFYVLVVK 25
           AYFV WSC Y++FQW++HA G +WWPY FLEL+TPWAP+WY A+A+IH+PC+G Y L+ K
Sbjct: 243 AYFVQWSCLYVIFQWVIHACGFTWWPYPFLELNTPWAPLWYFAMAVIHIPCYGIYALIFK 302

Query: 24  VKNSIFSR 1
            KN+IF R
Sbjct: 303 AKNTIFPR 310


>ref|XP_002279985.1| PREDICTED: uncharacterized protein LOC100253796 [Vitis vinifera]
           gi|297744042|emb|CBI37012.3| unnamed protein product
           [Vitis vinifera]
          Length = 336

 Score =  180 bits (457), Expect = 9e-44
 Identities = 73/128 (57%), Positives = 95/128 (74%)
 Frame = -1

Query: 384 QTCAGASMLTDIVFWCLLLPFQSDGNFSLNLLMGAMHGXXXXXXXXXXXXXXLPFPWFRV 205
           QTCAGA +LTDIVFWC+++PF S+ +  LN+LMG MH               LPFPWFR+
Sbjct: 199 QTCAGAVILTDIVFWCVIVPFLSNAHLGLNMLMGCMHTMNAFFLLLDTSLNSLPFPWFRL 258

Query: 204 AYFVFWSCTYILFQWILHASGVSWWPYAFLELSTPWAPMWYLAIALIHLPCFGFYVLVVK 25
           +YFV WSC Y++FQW++HA G SWWPY FLELST WAP+WY  +A++H+PC+G + L++K
Sbjct: 259 SYFVLWSCIYVIFQWVIHACGFSWWPYPFLELSTQWAPLWYFCLAVLHIPCYGLFALIMK 318

Query: 24  VKNSIFSR 1
            K SIFSR
Sbjct: 319 AKISIFSR 326


>gb|ABK92443.1| unknown [Populus trichocarpa]
          Length = 320

 Score =  180 bits (457), Expect = 9e-44
 Identities = 73/128 (57%), Positives = 94/128 (73%)
 Frame = -1

Query: 384 QTCAGASMLTDIVFWCLLLPFQSDGNFSLNLLMGAMHGXXXXXXXXXXXXXXLPFPWFRV 205
           QTCAGA +LTDI+FWC+++PF S+ +  LN LMG MH               LPFPWFR+
Sbjct: 183 QTCAGAVILTDIIFWCIIVPFLSNTHLGLNALMGCMHSLNAVFLLLDTALNSLPFPWFRL 242

Query: 204 AYFVFWSCTYILFQWILHASGVSWWPYAFLELSTPWAPMWYLAIALIHLPCFGFYVLVVK 25
           AYFV WSC Y++FQW++HA G +WWPY FL L+TPWAP+WY A+A+IH+PC+G Y L+ K
Sbjct: 243 AYFVQWSCLYVIFQWVIHACGFTWWPYPFLGLNTPWAPLWYFAMAVIHIPCYGIYALIFK 302

Query: 24  VKNSIFSR 1
            KN+IF R
Sbjct: 303 AKNTIFPR 310


>ref|XP_003591333.1| hypothetical protein MTR_1g086330 [Medicago truncatula]
           gi|355480381|gb|AES61584.1| hypothetical protein
           MTR_1g086330 [Medicago truncatula]
          Length = 335

 Score =  175 bits (443), Expect = 4e-42
 Identities = 71/128 (55%), Positives = 93/128 (72%)
 Frame = -1

Query: 384 QTCAGASMLTDIVFWCLLLPFQSDGNFSLNLLMGAMHGXXXXXXXXXXXXXXLPFPWFRV 205
           QT AG+ +LTDIVFWC+++PF S   F LN+LMG MH               LPFPWFR+
Sbjct: 198 QTSAGSIILTDIVFWCVIVPFLSISRFKLNMLMGCMHTLNAIFLLLDTMLNNLPFPWFRI 257

Query: 204 AYFVFWSCTYILFQWILHASGVSWWPYAFLELSTPWAPMWYLAIALIHLPCFGFYVLVVK 25
           AYFV WSC+Y++FQW++HA G +WWPY FLEL+ PWAP+WY+ +AL+H+PC+G Y L+VK
Sbjct: 258 AYFVLWSCSYVIFQWVIHACGSTWWPYPFLELNIPWAPLWYICMALVHIPCYGIYSLIVK 317

Query: 24  VKNSIFSR 1
            K +I  R
Sbjct: 318 TKINILHR 325


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