BLASTX nr result
ID: Coptis24_contig00019186
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00019186
(695 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group] 245 7e-63
gb|ABA95319.1| retrotransposon protein, putative, unclassified [... 243 3e-62
gb|AAV24812.1| putative polyprotein [Oryza sativa Japonica Group] 241 8e-62
gb|ABF98227.1| retrotransposon protein, putative, unclassified [... 237 2e-60
gb|AAP68389.1| putative polyprotein [Oryza sativa Japonica Group] 237 2e-60
>emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group]
Length = 1586
Score = 245 bits (625), Expect = 7e-63
Identities = 118/230 (51%), Positives = 158/230 (68%), Gaps = 3/230 (1%)
Frame = -1
Query: 695 QWVKWLSLAEWWFNTNFHTSLKMSPFTALYGYTPPHL---AIPPTVSTPIAAVKDYLRQR 525
+W WL+LAEWW+NT +HTS++M+PF ALYGY PP + ++P VS + Q+
Sbjct: 1360 RWHSWLALAEWWYNTTYHTSIQMTPFQALYGYPPPQINEFSVPCNVSEEARVT---IEQK 1416
Query: 524 QSMVELIKDGLCKAQERMKYFADKKRTDRSFVVGDWVYLKLQPYRQTTVSIRRSLKLSAK 345
++++ +K L +AQ R+K++AD+ R++R+ VGD VYLKLQPYRQT IR SLKL +K
Sbjct: 1417 DAIIQKLKYSLTEAQRRIKHYADRNRSERTLAVGDMVYLKLQPYRQTAFGIRGSLKLRSK 1476
Query: 344 FYGPFQVADRVGKVAYRLNLPTASKIHPVFHVSQLKKKLGSXXXXXXXXXXVAHSGQLLM 165
FYGPF++ ++VG+VAY+L LP S IHPVFHVSQLKK +GS V GQ+
Sbjct: 1477 FYGPFKIMEKVGRVAYKLQLPEGSNIHPVFHVSQLKKHIGSRAVPMANLPSVGPDGQIKT 1536
Query: 164 EPVAILACRIIPRNNQAVTQVLIQWSHTSPEDATWEDWSNISTHFPQFNP 15
EPVA+L R+IPR AVTQ L+ W + SP +ATWED S I + FP FNP
Sbjct: 1537 EPVAVLKRRMIPRGGVAVTQWLVLWHNLSPSEATWEDASMIQSMFPSFNP 1586
>gb|ABA95319.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 955
Score = 243 bits (619), Expect = 3e-62
Identities = 120/229 (52%), Positives = 155/229 (67%), Gaps = 3/229 (1%)
Frame = -1
Query: 692 WVKWLSLAEWWFNTNFHTSLKMSPFTALYGYTPPHLA---IPPTVSTPIAAVKDYLRQRQ 522
W W++LAEWW+NT +HT+++M+PF ALYGY+PP ++ +P VS L +++
Sbjct: 730 WCSWIALAEWWYNTTYHTAIQMTPFKALYGYSPPQISEFSVPCDVSQEARVT---LEEKE 786
Query: 521 SMVELIKDGLCKAQERMKYFADKKRTDRSFVVGDWVYLKLQPYRQTTVSIRRSLKLSAKF 342
++V+ +K + AQ RMKY+AD+ RT+R VGD VYLKLQPYRQ IR SLKL K+
Sbjct: 787 TIVQKLKASMEDAQRRMKYYADRNRTERKLEVGDMVYLKLQPYRQNAFGIRGSLKLRGKY 846
Query: 341 YGPFQVADRVGKVAYRLNLPTASKIHPVFHVSQLKKKLGSXXXXXXXXXXVAHSGQLLME 162
YGPF+V ++VG VAYRL LP + IHPVFHVSQLKK LG+ V GQ+ E
Sbjct: 847 YGPFKVLEKVGAVAYRLQLPEEAAIHPVFHVSQLKKHLGTHAVPMPNLPAVGPDGQIKTE 906
Query: 161 PVAILACRIIPRNNQAVTQVLIQWSHTSPEDATWEDWSNISTHFPQFNP 15
PVA+L R+IPRNN AVTQ LI WS+ +P +ATWED S I FP F P
Sbjct: 907 PVAVLQRRMIPRNNVAVTQWLILWSNLTPAEATWEDASYIQKVFPNFQP 955
>gb|AAV24812.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1475
Score = 241 bits (616), Expect = 8e-62
Identities = 115/230 (50%), Positives = 157/230 (68%), Gaps = 3/230 (1%)
Frame = -1
Query: 695 QWVKWLSLAEWWFNTNFHTSLKMSPFTALYGYTPPHL---AIPPTVSTPIAAVKDYLRQR 525
+W WL+LAEWW+NT FHT+++M+PF A+YGY+PP + ++P +S + ++
Sbjct: 1249 KWYSWLALAEWWYNTTFHTAIQMTPFKAMYGYSPPQINEFSVPCNISEEARVT---IEEK 1305
Query: 524 QSMVELIKDGLCKAQERMKYFADKKRTDRSFVVGDWVYLKLQPYRQTTVSIRRSLKLSAK 345
++++ +K+ L AQ RMKYFADK RT+R+ VGD VYLKL+PYRQ+ IR SLKL +K
Sbjct: 1306 EAILNKLKNSLADAQHRMKYFADKNRTERNLEVGDMVYLKLKPYRQSAFGIRGSLKLRSK 1365
Query: 344 FYGPFQVADRVGKVAYRLNLPTASKIHPVFHVSQLKKKLGSXXXXXXXXXXVAHSGQLLM 165
FYGPF+V ++G++AY+L LP ++IHPVFHVSQLKK LG V GQ+
Sbjct: 1366 FYGPFKVLQKIGQLAYKLQLPDDAQIHPVFHVSQLKKHLGKHAIPMSNLPSVGPDGQIKT 1425
Query: 164 EPVAILACRIIPRNNQAVTQVLIQWSHTSPEDATWEDWSNISTHFPQFNP 15
EP+A+L R++PR AVTQ LI W + SP +ATWED S I FP FNP
Sbjct: 1426 EPLAVLQRRMVPRKGVAVTQWLILWQNLSPAEATWEDASVIQAMFPSFNP 1475
>gb|ABF98227.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1160
Score = 237 bits (604), Expect = 2e-60
Identities = 115/230 (50%), Positives = 154/230 (66%), Gaps = 3/230 (1%)
Frame = -1
Query: 695 QWVKWLSLAEWWFNTNFHTSLKMSPFTALYGYTPPHL---AIPPTVSTPIAAVKDYLRQR 525
+W KWL AEWW+NT++HTSL+++ + A+YG TPPH+ AIP VS A ++QR
Sbjct: 934 EWYKWLPTAEWWYNTSYHTSLQVTSYEAMYGVTPPHIGERAIPGNVSEEARAT---VQQR 990
Query: 524 QSMVELIKDGLCKAQERMKYFADKKRTDRSFVVGDWVYLKLQPYRQTTVSIRRSLKLSAK 345
+ M+ +K+ L KAQ R+K D+ R++R F +GD VYLK+QPYRQ +R SLKL AK
Sbjct: 991 EDMLARLKENLAKAQTRIKKLVDRLRSERQFELGDMVYLKMQPYRQNAFGLRGSLKLRAK 1050
Query: 344 FYGPFQVADRVGKVAYRLNLPTASKIHPVFHVSQLKKKLGSXXXXXXXXXXVAHSGQLLM 165
FYGPF+V +++GKVAY+L LP + IHPVFHVSQLKK +G V G +
Sbjct: 1051 FYGPFRVLEKIGKVAYKLQLPEEANIHPVFHVSQLKKHVGRQAIPLPNLPLVGADGTVKT 1110
Query: 164 EPVAILACRIIPRNNQAVTQVLIQWSHTSPEDATWEDWSNISTHFPQFNP 15
EP+A+LA R+IPR N+ V Q LI W + +PEDATWE+ + I FP F P
Sbjct: 1111 EPLAVLARRVIPRQNEPVVQWLIHWENLTPEDATWENATFIQATFPHFRP 1160
>gb|AAP68389.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1246
Score = 237 bits (604), Expect = 2e-60
Identities = 115/230 (50%), Positives = 154/230 (66%), Gaps = 3/230 (1%)
Frame = -1
Query: 695 QWVKWLSLAEWWFNTNFHTSLKMSPFTALYGYTPPHL---AIPPTVSTPIAAVKDYLRQR 525
+W KWL AEWW+NT++HTSL+++ + A+YG TPPH+ AIP VS A ++QR
Sbjct: 1020 EWYKWLPTAEWWYNTSYHTSLQVTSYEAMYGVTPPHIGERAIPGNVSEEARAT---VQQR 1076
Query: 524 QSMVELIKDGLCKAQERMKYFADKKRTDRSFVVGDWVYLKLQPYRQTTVSIRRSLKLSAK 345
+ M+ +K+ L KAQ R+K D+ R++R F +GD VYLK+QPYRQ +R SLKL AK
Sbjct: 1077 EDMLARLKENLAKAQTRIKKLVDRLRSERQFELGDMVYLKMQPYRQNAFGLRGSLKLRAK 1136
Query: 344 FYGPFQVADRVGKVAYRLNLPTASKIHPVFHVSQLKKKLGSXXXXXXXXXXVAHSGQLLM 165
FYGPF+V +++GKVAY+L LP + IHPVFHVSQLKK +G V G +
Sbjct: 1137 FYGPFRVLEKIGKVAYKLQLPEEANIHPVFHVSQLKKHVGRQAIPLPNLPLVGADGTVKT 1196
Query: 164 EPVAILACRIIPRNNQAVTQVLIQWSHTSPEDATWEDWSNISTHFPQFNP 15
EP+A+LA R+IPR N+ V Q LI W + +PEDATWE+ + I FP F P
Sbjct: 1197 EPLAVLARRVIPRQNEPVVQWLIHWENLTPEDATWENATFIQATFPHFRP 1246