BLASTX nr result
ID: Coptis24_contig00019186
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00019186 (695 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group] 245 7e-63 gb|ABA95319.1| retrotransposon protein, putative, unclassified [... 243 3e-62 gb|AAV24812.1| putative polyprotein [Oryza sativa Japonica Group] 241 8e-62 gb|ABF98227.1| retrotransposon protein, putative, unclassified [... 237 2e-60 gb|AAP68389.1| putative polyprotein [Oryza sativa Japonica Group] 237 2e-60 >emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group] Length = 1586 Score = 245 bits (625), Expect = 7e-63 Identities = 118/230 (51%), Positives = 158/230 (68%), Gaps = 3/230 (1%) Frame = -1 Query: 695 QWVKWLSLAEWWFNTNFHTSLKMSPFTALYGYTPPHL---AIPPTVSTPIAAVKDYLRQR 525 +W WL+LAEWW+NT +HTS++M+PF ALYGY PP + ++P VS + Q+ Sbjct: 1360 RWHSWLALAEWWYNTTYHTSIQMTPFQALYGYPPPQINEFSVPCNVSEEARVT---IEQK 1416 Query: 524 QSMVELIKDGLCKAQERMKYFADKKRTDRSFVVGDWVYLKLQPYRQTTVSIRRSLKLSAK 345 ++++ +K L +AQ R+K++AD+ R++R+ VGD VYLKLQPYRQT IR SLKL +K Sbjct: 1417 DAIIQKLKYSLTEAQRRIKHYADRNRSERTLAVGDMVYLKLQPYRQTAFGIRGSLKLRSK 1476 Query: 344 FYGPFQVADRVGKVAYRLNLPTASKIHPVFHVSQLKKKLGSXXXXXXXXXXVAHSGQLLM 165 FYGPF++ ++VG+VAY+L LP S IHPVFHVSQLKK +GS V GQ+ Sbjct: 1477 FYGPFKIMEKVGRVAYKLQLPEGSNIHPVFHVSQLKKHIGSRAVPMANLPSVGPDGQIKT 1536 Query: 164 EPVAILACRIIPRNNQAVTQVLIQWSHTSPEDATWEDWSNISTHFPQFNP 15 EPVA+L R+IPR AVTQ L+ W + SP +ATWED S I + FP FNP Sbjct: 1537 EPVAVLKRRMIPRGGVAVTQWLVLWHNLSPSEATWEDASMIQSMFPSFNP 1586 >gb|ABA95319.1| retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group] Length = 955 Score = 243 bits (619), Expect = 3e-62 Identities = 120/229 (52%), Positives = 155/229 (67%), Gaps = 3/229 (1%) Frame = -1 Query: 692 WVKWLSLAEWWFNTNFHTSLKMSPFTALYGYTPPHLA---IPPTVSTPIAAVKDYLRQRQ 522 W W++LAEWW+NT +HT+++M+PF ALYGY+PP ++ +P VS L +++ Sbjct: 730 WCSWIALAEWWYNTTYHTAIQMTPFKALYGYSPPQISEFSVPCDVSQEARVT---LEEKE 786 Query: 521 SMVELIKDGLCKAQERMKYFADKKRTDRSFVVGDWVYLKLQPYRQTTVSIRRSLKLSAKF 342 ++V+ +K + AQ RMKY+AD+ RT+R VGD VYLKLQPYRQ IR SLKL K+ Sbjct: 787 TIVQKLKASMEDAQRRMKYYADRNRTERKLEVGDMVYLKLQPYRQNAFGIRGSLKLRGKY 846 Query: 341 YGPFQVADRVGKVAYRLNLPTASKIHPVFHVSQLKKKLGSXXXXXXXXXXVAHSGQLLME 162 YGPF+V ++VG VAYRL LP + IHPVFHVSQLKK LG+ V GQ+ E Sbjct: 847 YGPFKVLEKVGAVAYRLQLPEEAAIHPVFHVSQLKKHLGTHAVPMPNLPAVGPDGQIKTE 906 Query: 161 PVAILACRIIPRNNQAVTQVLIQWSHTSPEDATWEDWSNISTHFPQFNP 15 PVA+L R+IPRNN AVTQ LI WS+ +P +ATWED S I FP F P Sbjct: 907 PVAVLQRRMIPRNNVAVTQWLILWSNLTPAEATWEDASYIQKVFPNFQP 955 >gb|AAV24812.1| putative polyprotein [Oryza sativa Japonica Group] Length = 1475 Score = 241 bits (616), Expect = 8e-62 Identities = 115/230 (50%), Positives = 157/230 (68%), Gaps = 3/230 (1%) Frame = -1 Query: 695 QWVKWLSLAEWWFNTNFHTSLKMSPFTALYGYTPPHL---AIPPTVSTPIAAVKDYLRQR 525 +W WL+LAEWW+NT FHT+++M+PF A+YGY+PP + ++P +S + ++ Sbjct: 1249 KWYSWLALAEWWYNTTFHTAIQMTPFKAMYGYSPPQINEFSVPCNISEEARVT---IEEK 1305 Query: 524 QSMVELIKDGLCKAQERMKYFADKKRTDRSFVVGDWVYLKLQPYRQTTVSIRRSLKLSAK 345 ++++ +K+ L AQ RMKYFADK RT+R+ VGD VYLKL+PYRQ+ IR SLKL +K Sbjct: 1306 EAILNKLKNSLADAQHRMKYFADKNRTERNLEVGDMVYLKLKPYRQSAFGIRGSLKLRSK 1365 Query: 344 FYGPFQVADRVGKVAYRLNLPTASKIHPVFHVSQLKKKLGSXXXXXXXXXXVAHSGQLLM 165 FYGPF+V ++G++AY+L LP ++IHPVFHVSQLKK LG V GQ+ Sbjct: 1366 FYGPFKVLQKIGQLAYKLQLPDDAQIHPVFHVSQLKKHLGKHAIPMSNLPSVGPDGQIKT 1425 Query: 164 EPVAILACRIIPRNNQAVTQVLIQWSHTSPEDATWEDWSNISTHFPQFNP 15 EP+A+L R++PR AVTQ LI W + SP +ATWED S I FP FNP Sbjct: 1426 EPLAVLQRRMVPRKGVAVTQWLILWQNLSPAEATWEDASVIQAMFPSFNP 1475 >gb|ABF98227.1| retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group] Length = 1160 Score = 237 bits (604), Expect = 2e-60 Identities = 115/230 (50%), Positives = 154/230 (66%), Gaps = 3/230 (1%) Frame = -1 Query: 695 QWVKWLSLAEWWFNTNFHTSLKMSPFTALYGYTPPHL---AIPPTVSTPIAAVKDYLRQR 525 +W KWL AEWW+NT++HTSL+++ + A+YG TPPH+ AIP VS A ++QR Sbjct: 934 EWYKWLPTAEWWYNTSYHTSLQVTSYEAMYGVTPPHIGERAIPGNVSEEARAT---VQQR 990 Query: 524 QSMVELIKDGLCKAQERMKYFADKKRTDRSFVVGDWVYLKLQPYRQTTVSIRRSLKLSAK 345 + M+ +K+ L KAQ R+K D+ R++R F +GD VYLK+QPYRQ +R SLKL AK Sbjct: 991 EDMLARLKENLAKAQTRIKKLVDRLRSERQFELGDMVYLKMQPYRQNAFGLRGSLKLRAK 1050 Query: 344 FYGPFQVADRVGKVAYRLNLPTASKIHPVFHVSQLKKKLGSXXXXXXXXXXVAHSGQLLM 165 FYGPF+V +++GKVAY+L LP + IHPVFHVSQLKK +G V G + Sbjct: 1051 FYGPFRVLEKIGKVAYKLQLPEEANIHPVFHVSQLKKHVGRQAIPLPNLPLVGADGTVKT 1110 Query: 164 EPVAILACRIIPRNNQAVTQVLIQWSHTSPEDATWEDWSNISTHFPQFNP 15 EP+A+LA R+IPR N+ V Q LI W + +PEDATWE+ + I FP F P Sbjct: 1111 EPLAVLARRVIPRQNEPVVQWLIHWENLTPEDATWENATFIQATFPHFRP 1160 >gb|AAP68389.1| putative polyprotein [Oryza sativa Japonica Group] Length = 1246 Score = 237 bits (604), Expect = 2e-60 Identities = 115/230 (50%), Positives = 154/230 (66%), Gaps = 3/230 (1%) Frame = -1 Query: 695 QWVKWLSLAEWWFNTNFHTSLKMSPFTALYGYTPPHL---AIPPTVSTPIAAVKDYLRQR 525 +W KWL AEWW+NT++HTSL+++ + A+YG TPPH+ AIP VS A ++QR Sbjct: 1020 EWYKWLPTAEWWYNTSYHTSLQVTSYEAMYGVTPPHIGERAIPGNVSEEARAT---VQQR 1076 Query: 524 QSMVELIKDGLCKAQERMKYFADKKRTDRSFVVGDWVYLKLQPYRQTTVSIRRSLKLSAK 345 + M+ +K+ L KAQ R+K D+ R++R F +GD VYLK+QPYRQ +R SLKL AK Sbjct: 1077 EDMLARLKENLAKAQTRIKKLVDRLRSERQFELGDMVYLKMQPYRQNAFGLRGSLKLRAK 1136 Query: 344 FYGPFQVADRVGKVAYRLNLPTASKIHPVFHVSQLKKKLGSXXXXXXXXXXVAHSGQLLM 165 FYGPF+V +++GKVAY+L LP + IHPVFHVSQLKK +G V G + Sbjct: 1137 FYGPFRVLEKIGKVAYKLQLPEEANIHPVFHVSQLKKHVGRQAIPLPNLPLVGADGTVKT 1196 Query: 164 EPVAILACRIIPRNNQAVTQVLIQWSHTSPEDATWEDWSNISTHFPQFNP 15 EP+A+LA R+IPR N+ V Q LI W + +PEDATWE+ + I FP F P Sbjct: 1197 EPLAVLARRVIPRQNEPVVQWLIHWENLTPEDATWENATFIQATFPHFRP 1246