BLASTX nr result
ID: Coptis24_contig00019184
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00019184
(481 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI39176.3| unnamed protein product [Vitis vinifera] 262 2e-68
ref|XP_002269080.1| PREDICTED: pentatricopeptide repeat-containi... 262 2e-68
emb|CAN77475.1| hypothetical protein VITISV_041111 [Vitis vinifera] 262 2e-68
sp|Q9M9X9.1|PPR18_ARATH RecName: Full=Pentatricopeptide repeat-c... 246 1e-63
ref|NP_172156.2| pentatricopeptide repeat-containing protein [Ar... 246 1e-63
>emb|CBI39176.3| unnamed protein product [Vitis vinifera]
Length = 996
Score = 262 bits (669), Expect = 2e-68
Identities = 124/160 (77%), Positives = 141/160 (88%)
Frame = -2
Query: 480 TYNALVLVFLKADRLDSAYLIHREMSTSGFSMDGHTLGCFAQSLCKAGRWTEALKIVEEE 301
TYNALV VFL+ADRLD+AYL+HREMS SGF+MDG+TLGCF LCKAGRW EAL ++E+E
Sbjct: 234 TYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREALALIEKE 293
Query: 300 EFVPDTVIFTKMISGLCEASLFEEAMEFLHRMRSNSCIPNVVTYRTLLAGCLRKGQLGRC 121
EF DTVI+T+MISGLCEASLFEEAM+FL RMRS+SCIPNVVTYR LL GCLRK QLGRC
Sbjct: 294 EFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRC 353
Query: 120 KRILSMMIAEGCYPTPFLFKSLLHAYCSTGDYAYGYKLLK 1
KRILSMMI EGCYP+ +F SL+HAYC +GDY+Y YKLLK
Sbjct: 354 KRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLK 393
Score = 93.2 bits (230), Expect = 2e-17
Identities = 50/161 (31%), Positives = 84/161 (52%), Gaps = 3/161 (1%)
Frame = -2
Query: 477 YNALVLVFLKADRLDSAYLIHREMSTSGFSMDGHTLGCFAQSLCKAGRWTEALKIVE--- 307
Y+AL+ F K +LD A ++ +MS G+ + +T L K R ALK++
Sbjct: 674 YDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRML 733
Query: 306 EEEFVPDTVIFTKMISGLCEASLFEEAMEFLHRMRSNSCIPNVVTYRTLLAGCLRKGQLG 127
E P+ +I+T+MI GLC+ +EA + M C PNVVTY ++ G + G++
Sbjct: 734 ENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVD 793
Query: 126 RCKRILSMMIAEGCYPTPFLFKSLLHAYCSTGDYAYGYKLL 4
+C ++ M A+GC P ++ L++ C+ G ++LL
Sbjct: 794 KCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLL 834
Score = 85.9 bits (211), Expect = 3e-15
Identities = 44/142 (30%), Positives = 69/142 (48%), Gaps = 3/142 (2%)
Frame = -2
Query: 447 ADRLDSAYLIHREMSTSGFSMDGHTLGCFAQSLCKAGRWTEALKIVEE---EEFVPDTVI 277
A + + AY I REM + GF D T LC A + A + EE VPD
Sbjct: 458 AGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFT 517
Query: 276 FTKMISGLCEASLFEEAMEFLHRMRSNSCIPNVVTYRTLLAGCLRKGQLGRCKRILSMMI 97
+T +I C+ L ++A ++ M + C PNVVTY L+ L+ ++ + MM+
Sbjct: 518 YTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMML 577
Query: 96 AEGCYPTPFLFKSLLHAYCSTG 31
+EGC P + +L+ +C +G
Sbjct: 578 SEGCIPNVVTYTALIDGHCKSG 599
Score = 69.3 bits (168), Expect = 3e-10
Identities = 40/130 (30%), Positives = 64/130 (49%), Gaps = 3/130 (2%)
Frame = -2
Query: 480 TYNALVLVFLKADRLDSAYLIHREMSTSGFSMDGHTLGCFAQSLCKAGRWTEALKIVEE- 304
TY+ ++ + A ++D+A+L+ EM ++ D T S CK G +A K +E
Sbjct: 482 TYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEM 541
Query: 303 --EEFVPDTVIFTKMISGLCEASLFEEAMEFLHRMRSNSCIPNVVTYRTLLAGCLRKGQL 130
+ P+ V +T +I +A A E M S CIPNVVTY L+ G + GQ+
Sbjct: 542 VRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQI 601
Query: 129 GRCKRILSMM 100
+ +I + M
Sbjct: 602 EKACQIYARM 611
Score = 65.5 bits (158), Expect = 4e-09
Identities = 43/178 (24%), Positives = 75/178 (42%), Gaps = 19/178 (10%)
Frame = -2
Query: 480 TYNALVLVFLKADRLDSAYLIHREMSTSG--------FSMDG--------HTLGCFAQSL 349
TY AL+ K+ +++ A I+ M + F +D T G L
Sbjct: 587 TYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGL 646
Query: 348 CKAGRWTEA---LKIVEEEEFVPDTVIFTKMISGLCEASLFEEAMEFLHRMRSNSCIPNV 178
CKA + EA L ++ E P+ +++ +I G C+ +EA +M PNV
Sbjct: 647 CKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNV 706
Query: 177 VTYRTLLAGCLRKGQLGRCKRILSMMIAEGCYPTPFLFKSLLHAYCSTGDYAYGYKLL 4
TY +L+ + +L ++LS M+ C P ++ ++ C G Y+L+
Sbjct: 707 YTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLM 764
>ref|XP_002269080.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Vitis vinifera]
Length = 1045
Score = 262 bits (669), Expect = 2e-68
Identities = 124/160 (77%), Positives = 141/160 (88%)
Frame = -2
Query: 480 TYNALVLVFLKADRLDSAYLIHREMSTSGFSMDGHTLGCFAQSLCKAGRWTEALKIVEEE 301
TYNALV VFL+ADRLD+AYL+HREMS SGF+MDG+TLGCF LCKAGRW EAL ++E+E
Sbjct: 234 TYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREALALIEKE 293
Query: 300 EFVPDTVIFTKMISGLCEASLFEEAMEFLHRMRSNSCIPNVVTYRTLLAGCLRKGQLGRC 121
EF DTVI+T+MISGLCEASLFEEAM+FL RMRS+SCIPNVVTYR LL GCLRK QLGRC
Sbjct: 294 EFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRC 353
Query: 120 KRILSMMIAEGCYPTPFLFKSLLHAYCSTGDYAYGYKLLK 1
KRILSMMI EGCYP+ +F SL+HAYC +GDY+Y YKLLK
Sbjct: 354 KRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLK 393
Score = 93.2 bits (230), Expect = 2e-17
Identities = 50/161 (31%), Positives = 84/161 (52%), Gaps = 3/161 (1%)
Frame = -2
Query: 477 YNALVLVFLKADRLDSAYLIHREMSTSGFSMDGHTLGCFAQSLCKAGRWTEALKIVE--- 307
Y+AL+ F K +LD A ++ +MS G+ + +T L K R ALK++
Sbjct: 674 YDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRML 733
Query: 306 EEEFVPDTVIFTKMISGLCEASLFEEAMEFLHRMRSNSCIPNVVTYRTLLAGCLRKGQLG 127
E P+ +I+T+MI GLC+ +EA + M C PNVVTY ++ G + G++
Sbjct: 734 ENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVD 793
Query: 126 RCKRILSMMIAEGCYPTPFLFKSLLHAYCSTGDYAYGYKLL 4
+C ++ M A+GC P ++ L++ C+ G ++LL
Sbjct: 794 KCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLL 834
Score = 85.9 bits (211), Expect = 3e-15
Identities = 44/142 (30%), Positives = 69/142 (48%), Gaps = 3/142 (2%)
Frame = -2
Query: 447 ADRLDSAYLIHREMSTSGFSMDGHTLGCFAQSLCKAGRWTEALKIVEE---EEFVPDTVI 277
A + + AY I REM + GF D T LC A + A + EE VPD
Sbjct: 458 AGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFT 517
Query: 276 FTKMISGLCEASLFEEAMEFLHRMRSNSCIPNVVTYRTLLAGCLRKGQLGRCKRILSMMI 97
+T +I C+ L ++A ++ M + C PNVVTY L+ L+ ++ + MM+
Sbjct: 518 YTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMML 577
Query: 96 AEGCYPTPFLFKSLLHAYCSTG 31
+EGC P + +L+ +C +G
Sbjct: 578 SEGCIPNVVTYTALIDGHCKSG 599
Score = 69.3 bits (168), Expect = 3e-10
Identities = 40/130 (30%), Positives = 64/130 (49%), Gaps = 3/130 (2%)
Frame = -2
Query: 480 TYNALVLVFLKADRLDSAYLIHREMSTSGFSMDGHTLGCFAQSLCKAGRWTEALKIVEE- 304
TY+ ++ + A ++D+A+L+ EM ++ D T S CK G +A K +E
Sbjct: 482 TYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEM 541
Query: 303 --EEFVPDTVIFTKMISGLCEASLFEEAMEFLHRMRSNSCIPNVVTYRTLLAGCLRKGQL 130
+ P+ V +T +I +A A E M S CIPNVVTY L+ G + GQ+
Sbjct: 542 VRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQI 601
Query: 129 GRCKRILSMM 100
+ +I + M
Sbjct: 602 EKACQIYARM 611
Score = 65.5 bits (158), Expect = 4e-09
Identities = 43/178 (24%), Positives = 75/178 (42%), Gaps = 19/178 (10%)
Frame = -2
Query: 480 TYNALVLVFLKADRLDSAYLIHREMSTSG--------FSMDG--------HTLGCFAQSL 349
TY AL+ K+ +++ A I+ M + F +D T G L
Sbjct: 587 TYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGL 646
Query: 348 CKAGRWTEA---LKIVEEEEFVPDTVIFTKMISGLCEASLFEEAMEFLHRMRSNSCIPNV 178
CKA + EA L ++ E P+ +++ +I G C+ +EA +M PNV
Sbjct: 647 CKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNV 706
Query: 177 VTYRTLLAGCLRKGQLGRCKRILSMMIAEGCYPTPFLFKSLLHAYCSTGDYAYGYKLL 4
TY +L+ + +L ++LS M+ C P ++ ++ C G Y+L+
Sbjct: 707 YTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLM 764
>emb|CAN77475.1| hypothetical protein VITISV_041111 [Vitis vinifera]
Length = 1010
Score = 262 bits (669), Expect = 2e-68
Identities = 124/160 (77%), Positives = 141/160 (88%)
Frame = -2
Query: 480 TYNALVLVFLKADRLDSAYLIHREMSTSGFSMDGHTLGCFAQSLCKAGRWTEALKIVEEE 301
TYNALV VFL+ADRLD+AYL+HREMS SGF+MDG+TLGCF LCKAGRW EAL ++E+E
Sbjct: 234 TYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREALALIEKE 293
Query: 300 EFVPDTVIFTKMISGLCEASLFEEAMEFLHRMRSNSCIPNVVTYRTLLAGCLRKGQLGRC 121
EF DTVI+T+MISGLCEASLFEEAM+FL RMRS+SCIPNVVTYR LL GCLRK QLGRC
Sbjct: 294 EFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRC 353
Query: 120 KRILSMMIAEGCYPTPFLFKSLLHAYCSTGDYAYGYKLLK 1
KRILSMMI EGCYP+ +F SL+HAYC +GDY+Y YKLLK
Sbjct: 354 KRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLK 393
Score = 93.2 bits (230), Expect = 2e-17
Identities = 50/161 (31%), Positives = 84/161 (52%), Gaps = 3/161 (1%)
Frame = -2
Query: 477 YNALVLVFLKADRLDSAYLIHREMSTSGFSMDGHTLGCFAQSLCKAGRWTEALKIVE--- 307
Y+AL+ F K +LD A ++ +MS G+ + +T L K R ALK++
Sbjct: 674 YDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRML 733
Query: 306 EEEFVPDTVIFTKMISGLCEASLFEEAMEFLHRMRSNSCIPNVVTYRTLLAGCLRKGQLG 127
E P+ +I+T+MI GLC+ +EA + M C PNVVTY ++ G + G++
Sbjct: 734 ENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVD 793
Query: 126 RCKRILSMMIAEGCYPTPFLFKSLLHAYCSTGDYAYGYKLL 4
+C ++ M A+GC P ++ L++ C+ G ++LL
Sbjct: 794 KCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLL 834
Score = 85.9 bits (211), Expect = 3e-15
Identities = 44/142 (30%), Positives = 69/142 (48%), Gaps = 3/142 (2%)
Frame = -2
Query: 447 ADRLDSAYLIHREMSTSGFSMDGHTLGCFAQSLCKAGRWTEALKIVEE---EEFVPDTVI 277
A + + AY I REM + GF D T LC A + A + EE VPD
Sbjct: 458 AGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFT 517
Query: 276 FTKMISGLCEASLFEEAMEFLHRMRSNSCIPNVVTYRTLLAGCLRKGQLGRCKRILSMMI 97
+T +I C+ L ++A ++ M + C PNVVTY L+ L+ ++ + MM+
Sbjct: 518 YTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMML 577
Query: 96 AEGCYPTPFLFKSLLHAYCSTG 31
+EGC P + +L+ +C +G
Sbjct: 578 SEGCIPNVVTYTALIDGHCKSG 599
Score = 69.3 bits (168), Expect = 3e-10
Identities = 40/130 (30%), Positives = 64/130 (49%), Gaps = 3/130 (2%)
Frame = -2
Query: 480 TYNALVLVFLKADRLDSAYLIHREMSTSGFSMDGHTLGCFAQSLCKAGRWTEALKIVEE- 304
TY+ ++ + A ++D+A+L+ EM ++ D T S CK G +A K +E
Sbjct: 482 TYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEM 541
Query: 303 --EEFVPDTVIFTKMISGLCEASLFEEAMEFLHRMRSNSCIPNVVTYRTLLAGCLRKGQL 130
+ P+ V +T +I +A A E M S CIPNVVTY L+ G + GQ+
Sbjct: 542 VRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQI 601
Query: 129 GRCKRILSMM 100
+ +I + M
Sbjct: 602 EKACQIYARM 611
Score = 65.5 bits (158), Expect = 4e-09
Identities = 43/178 (24%), Positives = 75/178 (42%), Gaps = 19/178 (10%)
Frame = -2
Query: 480 TYNALVLVFLKADRLDSAYLIHREMSTSG--------FSMDG--------HTLGCFAQSL 349
TY AL+ K+ +++ A I+ M + F +D T G L
Sbjct: 587 TYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGL 646
Query: 348 CKAGRWTEA---LKIVEEEEFVPDTVIFTKMISGLCEASLFEEAMEFLHRMRSNSCIPNV 178
CKA + EA L ++ E P+ +++ +I G C+ +EA +M PNV
Sbjct: 647 CKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNV 706
Query: 177 VTYRTLLAGCLRKGQLGRCKRILSMMIAEGCYPTPFLFKSLLHAYCSTGDYAYGYKLL 4
TY +L+ + +L ++LS M+ C P ++ ++ C G Y+L+
Sbjct: 707 YTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLM 764
>sp|Q9M9X9.1|PPR18_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g06710, mitochondrial; Flags: Precursor
gi|7523709|gb|AAF63148.1|AC011001_18 Hypothetical
protein [Arabidopsis thaliana]
Length = 987
Score = 246 bits (628), Expect = 1e-63
Identities = 114/160 (71%), Positives = 134/160 (83%)
Frame = -2
Query: 480 TYNALVLVFLKADRLDSAYLIHREMSTSGFSMDGHTLGCFAQSLCKAGRWTEALKIVEEE 301
TYN L+ FLKADRLDSA LIHREMS + MDG TL CFA SLCK G+W EAL +VE E
Sbjct: 237 TYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVETE 296
Query: 300 EFVPDTVIFTKMISGLCEASLFEEAMEFLHRMRSNSCIPNVVTYRTLLAGCLRKGQLGRC 121
FVPDTV +TK+ISGLCEASLFEEAM+FL+RMR+ SC+PNVVTY TLL GCL K QLGRC
Sbjct: 297 NFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRC 356
Query: 120 KRILSMMIAEGCYPTPFLFKSLLHAYCSTGDYAYGYKLLK 1
KR+L+MM+ EGCYP+P +F SL+HAYC++GD++Y YKLLK
Sbjct: 357 KRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLK 396
Score = 82.0 bits (201), Expect = 4e-14
Identities = 43/142 (30%), Positives = 68/142 (47%), Gaps = 3/142 (2%)
Frame = -2
Query: 447 ADRLDSAYLIHREMSTSGFSMDGHTLGCFAQSLCKAGRWTEALKIVEEEE---FVPDTVI 277
A + + A+ + REM GF D T LC A + A + EE + V D
Sbjct: 461 AGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYT 520
Query: 276 FTKMISGLCEASLFEEAMEFLHRMRSNSCIPNVVTYRTLLAGCLRKGQLGRCKRILSMMI 97
+T M+ C+A L E+A ++ + MR C PNVVTY L+ L+ ++ + M+
Sbjct: 521 YTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETML 580
Query: 96 AEGCYPTPFLFKSLLHAYCSTG 31
+EGC P + +L+ +C G
Sbjct: 581 SEGCLPNIVTYSALIDGHCKAG 602
Score = 81.6 bits (200), Expect = 6e-14
Identities = 49/162 (30%), Positives = 75/162 (46%), Gaps = 3/162 (1%)
Frame = -2
Query: 477 YNALVLVFLKADRLDSAYLIHREMSTSGFSMDGHTLGCFAQSLCKAGRWTEALKIVE--- 307
Y+AL+ K +LD A + EMS GF +T K R A K++
Sbjct: 677 YDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKML 736
Query: 306 EEEFVPDTVIFTKMISGLCEASLFEEAMEFLHRMRSNSCIPNVVTYRTLLAGCLRKGQLG 127
E P+ VI+T+MI GLC+ +EA + + M C PNVVTY ++ G G++
Sbjct: 737 ENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIE 796
Query: 126 RCKRILSMMIAEGCYPTPFLFKSLLHAYCSTGDYAYGYKLLK 1
C +L M ++G P ++ L+ C G + LL+
Sbjct: 797 TCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLE 838
Score = 68.2 bits (165), Expect = 7e-10
Identities = 40/130 (30%), Positives = 61/130 (46%), Gaps = 3/130 (2%)
Frame = -2
Query: 480 TYNALVLVFLKADRLDSAYLIHREMSTSGFSMDGHTLGCFAQSLCKAGRWTEALKIVEEE 301
TY+ ++ A +++ A+L+ EM G D +T S CKAG +A K E
Sbjct: 485 TYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEM 544
Query: 300 EFV---PDTVIFTKMISGLCEASLFEEAMEFLHRMRSNSCIPNVVTYRTLLAGCLRKGQL 130
V P+ V +T +I +A A E M S C+PN+VTY L+ G + GQ+
Sbjct: 545 REVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQV 604
Query: 129 GRCKRILSMM 100
+ +I M
Sbjct: 605 EKACQIFERM 614
Score = 63.2 bits (152), Expect = 2e-08
Identities = 41/130 (31%), Positives = 60/130 (46%), Gaps = 3/130 (2%)
Frame = -2
Query: 480 TYNALVLVFLKADRLDSAYLIHREMSTSGFSMDGHTLGCFAQSLCKAGRWTEALKIV--- 310
TY++L+ + K R D A + +M + + + LCK G+ EA K++
Sbjct: 711 TYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMM 770
Query: 309 EEEEFVPDTVIFTKMISGLCEASLFEEAMEFLHRMRSNSCIPNVVTYRTLLAGCLRKGQL 130
EE+ P+ V +T MI G E +E L RM S PN VTYR L+ C + G L
Sbjct: 771 EEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGAL 830
Query: 129 GRCKRILSMM 100
+L M
Sbjct: 831 DVAHNLLEEM 840
Score = 59.3 bits (142), Expect = 3e-07
Identities = 42/179 (23%), Positives = 73/179 (40%), Gaps = 19/179 (10%)
Frame = -2
Query: 480 TYNALVLVFLKADRLDSAYLIHREMSTSGFSMDGH----------------TLGCFAQSL 349
TY+AL+ KA +++ A I M S D T G
Sbjct: 590 TYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGF 649
Query: 348 CKAGRWTEALKIVEE---EEFVPDTVIFTKMISGLCEASLFEEAMEFLHRMRSNSCIPNV 178
CK+ R EA K+++ E P+ +++ +I GLC+ +EA E M + +
Sbjct: 650 CKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATL 709
Query: 177 VTYRTLLAGCLRKGQLGRCKRILSMMIAEGCYPTPFLFKSLLHAYCSTGDYAYGYKLLK 1
TY +L+ + + ++LS M+ C P ++ ++ C G YKL++
Sbjct: 710 YTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQ 768
>ref|NP_172156.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332189906|gb|AEE28027.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 997
Score = 246 bits (628), Expect = 1e-63
Identities = 114/160 (71%), Positives = 134/160 (83%)
Frame = -2
Query: 480 TYNALVLVFLKADRLDSAYLIHREMSTSGFSMDGHTLGCFAQSLCKAGRWTEALKIVEEE 301
TYN L+ FLKADRLDSA LIHREMS + MDG TL CFA SLCK G+W EAL +VE E
Sbjct: 237 TYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVETE 296
Query: 300 EFVPDTVIFTKMISGLCEASLFEEAMEFLHRMRSNSCIPNVVTYRTLLAGCLRKGQLGRC 121
FVPDTV +TK+ISGLCEASLFEEAM+FL+RMR+ SC+PNVVTY TLL GCL K QLGRC
Sbjct: 297 NFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRC 356
Query: 120 KRILSMMIAEGCYPTPFLFKSLLHAYCSTGDYAYGYKLLK 1
KR+L+MM+ EGCYP+P +F SL+HAYC++GD++Y YKLLK
Sbjct: 357 KRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLK 396
Score = 82.0 bits (201), Expect = 4e-14
Identities = 43/142 (30%), Positives = 68/142 (47%), Gaps = 3/142 (2%)
Frame = -2
Query: 447 ADRLDSAYLIHREMSTSGFSMDGHTLGCFAQSLCKAGRWTEALKIVEEEE---FVPDTVI 277
A + + A+ + REM GF D T LC A + A + EE + V D
Sbjct: 461 AGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYT 520
Query: 276 FTKMISGLCEASLFEEAMEFLHRMRSNSCIPNVVTYRTLLAGCLRKGQLGRCKRILSMMI 97
+T M+ C+A L E+A ++ + MR C PNVVTY L+ L+ ++ + M+
Sbjct: 521 YTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETML 580
Query: 96 AEGCYPTPFLFKSLLHAYCSTG 31
+EGC P + +L+ +C G
Sbjct: 581 SEGCLPNIVTYSALIDGHCKAG 602
Score = 81.6 bits (200), Expect = 6e-14
Identities = 49/162 (30%), Positives = 75/162 (46%), Gaps = 3/162 (1%)
Frame = -2
Query: 477 YNALVLVFLKADRLDSAYLIHREMSTSGFSMDGHTLGCFAQSLCKAGRWTEALKIVE--- 307
Y+AL+ K +LD A + EMS GF +T K R A K++
Sbjct: 677 YDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKML 736
Query: 306 EEEFVPDTVIFTKMISGLCEASLFEEAMEFLHRMRSNSCIPNVVTYRTLLAGCLRKGQLG 127
E P+ VI+T+MI GLC+ +EA + + M C PNVVTY ++ G G++
Sbjct: 737 ENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIE 796
Query: 126 RCKRILSMMIAEGCYPTPFLFKSLLHAYCSTGDYAYGYKLLK 1
C +L M ++G P ++ L+ C G + LL+
Sbjct: 797 TCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLE 838
Score = 68.2 bits (165), Expect = 7e-10
Identities = 40/130 (30%), Positives = 61/130 (46%), Gaps = 3/130 (2%)
Frame = -2
Query: 480 TYNALVLVFLKADRLDSAYLIHREMSTSGFSMDGHTLGCFAQSLCKAGRWTEALKIVEEE 301
TY+ ++ A +++ A+L+ EM G D +T S CKAG +A K E
Sbjct: 485 TYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEM 544
Query: 300 EFV---PDTVIFTKMISGLCEASLFEEAMEFLHRMRSNSCIPNVVTYRTLLAGCLRKGQL 130
V P+ V +T +I +A A E M S C+PN+VTY L+ G + GQ+
Sbjct: 545 REVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQV 604
Query: 129 GRCKRILSMM 100
+ +I M
Sbjct: 605 EKACQIFERM 614
Score = 63.2 bits (152), Expect = 2e-08
Identities = 41/130 (31%), Positives = 60/130 (46%), Gaps = 3/130 (2%)
Frame = -2
Query: 480 TYNALVLVFLKADRLDSAYLIHREMSTSGFSMDGHTLGCFAQSLCKAGRWTEALKIV--- 310
TY++L+ + K R D A + +M + + + LCK G+ EA K++
Sbjct: 711 TYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMM 770
Query: 309 EEEEFVPDTVIFTKMISGLCEASLFEEAMEFLHRMRSNSCIPNVVTYRTLLAGCLRKGQL 130
EE+ P+ V +T MI G E +E L RM S PN VTYR L+ C + G L
Sbjct: 771 EEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGAL 830
Query: 129 GRCKRILSMM 100
+L M
Sbjct: 831 DVAHNLLEEM 840
Score = 59.3 bits (142), Expect = 3e-07
Identities = 42/179 (23%), Positives = 73/179 (40%), Gaps = 19/179 (10%)
Frame = -2
Query: 480 TYNALVLVFLKADRLDSAYLIHREMSTSGFSMDGH----------------TLGCFAQSL 349
TY+AL+ KA +++ A I M S D T G
Sbjct: 590 TYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGF 649
Query: 348 CKAGRWTEALKIVEE---EEFVPDTVIFTKMISGLCEASLFEEAMEFLHRMRSNSCIPNV 178
CK+ R EA K+++ E P+ +++ +I GLC+ +EA E M + +
Sbjct: 650 CKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATL 709
Query: 177 VTYRTLLAGCLRKGQLGRCKRILSMMIAEGCYPTPFLFKSLLHAYCSTGDYAYGYKLLK 1
TY +L+ + + ++LS M+ C P ++ ++ C G YKL++
Sbjct: 710 YTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQ 768