BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019178
         (684 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P82244.1|RK34_SPIOL RecName: Full=50S ribosomal protein L34, ...   101   1e-19
ref|XP_002522558.1| 50S ribosomal protein L34, chloroplast precu...    93   6e-17
ref|NP_001238013.1| uncharacterized protein LOC100500433 [Glycin...    92   7e-17
ref|XP_004134668.1| PREDICTED: 50S ribosomal protein L34, chloro...    90   4e-16
ref|XP_002274637.1| PREDICTED: 50S ribosomal protein L34, chloro...    90   4e-16

>sp|P82244.1|RK34_SPIOL RecName: Full=50S ribosomal protein L34, chloroplastic; AltName:
           Full=CL34; Flags: Precursor gi|189096152|pdb|3BBO|4
           Chain 4, Homology Model For The Spinach Chloroplast 50s
           Subunit Fitted To 9.4a Cryo-Em Map Of The 70s
           Chlororibosome gi|7578860|gb|AAF64157.1|AF238221_1
           plastid ribosomal protein L34 precursor [Spinacia
           oleracea]
          Length = 152

 Score =  101 bits (252), Expect = 1e-19
 Identities = 63/133 (47%), Positives = 73/133 (54%)
 Frame = -2

Query: 587 RAPSASLSFLAGTRTPTSSIRLGTTSTRSGLLHCXXXXXXXXXXXXXXXXXXXXGINFSV 408
           R PSASL+F+ G+RT    +     S RSG LHC                     +  S 
Sbjct: 18  RTPSASLTFITGSRTTNKRVSFNGGSARSGSLHCSFLAPSSSLSSNFSGLSLGLDLT-SN 76

Query: 407 SNVKTRKRSGHVVCAGRAALCLTKRSRSRKSLAXXXXXXXXXXXXXXRAILKRRRAKGRK 228
           + V T +    VV AG+AALCLTKRSRSRKSLA              RA+LKRRRAKGRK
Sbjct: 77  TGVSTDRCRRFVVRAGKAALCLTKRSRSRKSLARTHGFRLRMSTTSGRALLKRRRAKGRK 136

Query: 227 ILCTKTNPNSGVR 189
           ILCTKTNP+SG R
Sbjct: 137 ILCTKTNPSSGKR 149


>ref|XP_002522558.1| 50S ribosomal protein L34, chloroplast precursor, putative [Ricinus
           communis] gi|223538249|gb|EEF39858.1| 50S ribosomal
           protein L34, chloroplast precursor, putative [Ricinus
           communis]
          Length = 161

 Score = 92.8 bits (229), Expect = 6e-17
 Identities = 60/133 (45%), Positives = 72/133 (54%), Gaps = 2/133 (1%)
 Frame = -2

Query: 587 RAPSASLSFLAGTRTPT--SSIRLGTTSTRSGLLHCXXXXXXXXXXXXXXXXXXXXGINF 414
           R PSASLS   GTR     S   +  +++RSGLLHC                        
Sbjct: 26  RCPSASLSLSTGTRPRNKFSMNVISNSTSRSGLLHCSFLSTSSLSLSSSFSGLSLGLDLN 85

Query: 413 SVSNVKTRKRSGHVVCAGRAALCLTKRSRSRKSLAXXXXXXXXXXXXXXRAILKRRRAKG 234
           S + V+  +  G VV AG+AALC TKR+RSRKSLA              RA+LKRRRAKG
Sbjct: 86  SSTGVRKGRGYGLVVRAGKAALCQTKRNRSRKSLARTHGFRRRMRTTSGRAVLKRRRAKG 145

Query: 233 RKILCTKTNPNSG 195
           RK+LCTK+NPNSG
Sbjct: 146 RKVLCTKSNPNSG 158


>ref|NP_001238013.1| uncharacterized protein LOC100500433 [Glycine max]
           gi|255630327|gb|ACU15520.1| unknown [Glycine max]
          Length = 146

 Score = 92.4 bits (228), Expect = 7e-17
 Identities = 65/136 (47%), Positives = 79/136 (58%), Gaps = 5/136 (3%)
 Frame = -2

Query: 587 RAPSASLSFLAGTRTPTS-SIRLGTT--STRSGLLHCXXXXXXXXXXXXXXXXXXXXGIN 417
           RAP+ S S +  T  P+S S+ L  T  S RS LLHC                    G++
Sbjct: 11  RAPTPSASLILTTPKPSSLSLNLTRTCSSARSPLLHCSFLSSPSHLSSPSSVSGLSLGLD 70

Query: 416 FSVSNVKTR--KRSGHVVCAGRAALCLTKRSRSRKSLAXXXXXXXXXXXXXXRAILKRRR 243
            + SNV T+  K SG VV AG+AALCLTKRSRSRKSLA              RA+L+RRR
Sbjct: 71  LT-SNVGTKRGKGSGLVVRAGKAALCLTKRSRSRKSLARTHGFRKRMSTPGGRAVLRRRR 129

Query: 242 AKGRKILCTKTNPNSG 195
           AKGR++LCTKT+PNSG
Sbjct: 130 AKGRRVLCTKTHPNSG 145


>ref|XP_004134668.1| PREDICTED: 50S ribosomal protein L34, chloroplastic-like [Cucumis
           sativus] gi|449479241|ref|XP_004155546.1| PREDICTED: 50S
           ribosomal protein L34, chloroplastic-like [Cucumis
           sativus]
          Length = 155

 Score = 90.1 bits (222), Expect = 4e-16
 Identities = 63/136 (46%), Positives = 71/136 (52%), Gaps = 3/136 (2%)
 Frame = -2

Query: 587 RAPSASLSFLAGTRTPTSSIRLGTT---STRSGLLHCXXXXXXXXXXXXXXXXXXXXGIN 417
           R PSASL F  G+R    S+ L T    S RSGLLHC                       
Sbjct: 20  RVPSASLVFSTGSRG-YCSVSLNTVNNNSARSGLLHCSFLPSSSLSCSSSFSGLSLGLDW 78

Query: 416 FSVSNVKTRKRSGHVVCAGRAALCLTKRSRSRKSLAXXXXXXXXXXXXXXRAILKRRRAK 237
            S   V   K  G VV AG+AALC TKR+RSRKSLA              RA+LKRRRAK
Sbjct: 79  SSKVGVGQGKGRGLVVRAGKAALCQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAK 138

Query: 236 GRKILCTKTNPNSGVR 189
           GRK+LCTK+NP+SG R
Sbjct: 139 GRKVLCTKSNPSSGKR 154


>ref|XP_002274637.1| PREDICTED: 50S ribosomal protein L34, chloroplastic-like [Vitis
           vinifera]
          Length = 148

 Score = 90.1 bits (222), Expect = 4e-16
 Identities = 62/135 (45%), Positives = 74/135 (54%), Gaps = 4/135 (2%)
 Frame = -2

Query: 581 PSASLSFLAGT-RTPTSSIRLGTTSTRSGLLHC-XXXXXXXXXXXXXXXXXXXXGINFSV 408
           PSASLS LAG+ R   +S+ +    T   LLHC                      +N   
Sbjct: 16  PSASLSLLAGSKRRSLASLNMRNNPTSPALLHCSFTPTVSLSFPSSFSGLSLGLDLN--- 72

Query: 407 SNVKTRKRSGH--VVCAGRAALCLTKRSRSRKSLAXXXXXXXXXXXXXXRAILKRRRAKG 234
           S+V  RK  GH  VV AG+AALC TKR+RSRKSLA              RA+LKRRRAKG
Sbjct: 73  SSVGVRKERGHGLVVRAGKAALCQTKRNRSRKSLARTHGFRRRMRTTSGRAVLKRRRAKG 132

Query: 233 RKILCTKTNPNSGVR 189
           RK+LCTK+NP+SG R
Sbjct: 133 RKVLCTKSNPSSGKR 147