BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019170
         (239 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68286.1| hypothetical protein VITISV_017015 [Vitis vinifera]    63   5e-12
gb|AER13172.1| putative gag/pol polyprotein [Phaseolus vulgaris]       63   7e-12
emb|CAN75440.1| hypothetical protein VITISV_007304 [Vitis vinifera]    62   2e-11
emb|CAN74160.1| hypothetical protein VITISV_018405 [Vitis vinifera]    63   2e-11
emb|CAN74178.1| hypothetical protein VITISV_029257 [Vitis vinifera]    62   2e-11

>emb|CAN68286.1| hypothetical protein VITISV_017015 [Vitis vinifera]
          Length = 805

 Score = 63.2 bits (152), Expect(2) = 5e-12
 Identities = 29/51 (56%), Positives = 37/51 (72%)
 Frame = +2

Query: 80  RMRCMLSHSKLFRSYWVEIMRTAVHVINLSPSKSLNSDYPERVWSSEDVDY 232
           R+RCMLSH+KL +S+W E MRT V +INLSPS  L  D  ERVW+ + V +
Sbjct: 712 RIRCMLSHAKLPKSFWGEAMRTTVDLINLSPSYPLEGDITERVWTGKFVSF 762



 Score = 32.3 bits (72), Expect(2) = 5e-12
 Identities = 14/27 (51%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
 Frame = +1

Query: 4   GFVMSRLFPR-PQQNGIAERMNKTIVE 81
           G  + ++ P+ PQQNGI ERMN+TI +
Sbjct: 685 GIKLEKMVPKTPQQNGIVERMNRTICD 711


>gb|AER13172.1| putative gag/pol polyprotein [Phaseolus vulgaris]
          Length = 1556

 Score = 63.2 bits (152), Expect(3) = 7e-12
 Identities = 27/53 (50%), Positives = 41/53 (77%)
 Frame = +2

Query: 80  RMRCMLSHSKLFRSYWVEIMRTAVHVINLSPSKSLNSDYPERVWSSEDVDYGY 238
           R+RCMLS +KL + +W E + TAVHVINLSP+ +LN++ P++VW  ++V Y +
Sbjct: 587 RVRCMLSKAKLPKHFWGEALYTAVHVINLSPAIALNAEVPDKVWFGKNVKYDH 639



 Score = 30.0 bits (66), Expect(3) = 7e-12
 Identities = 11/16 (68%), Positives = 15/16 (93%)
 Frame = +1

Query: 34  PQQNGIAERMNKTIVE 81
           PQ NG+AERMN+T++E
Sbjct: 571 PQLNGLAERMNRTLIE 586



 Score = 21.2 bits (43), Expect(3) = 7e-12
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +3

Query: 3   GIRHEQIVPKT 35
           GIRHE+  PKT
Sbjct: 560 GIRHEKTPPKT 570


>emb|CAN75440.1| hypothetical protein VITISV_007304 [Vitis vinifera]
          Length = 1362

 Score = 62.4 bits (150), Expect(2) = 2e-11
 Identities = 25/53 (47%), Positives = 38/53 (71%)
 Frame = +2

Query: 80  RMRCMLSHSKLFRSYWVEIMRTAVHVINLSPSKSLNSDYPERVWSSEDVDYGY 238
           R+RC+LS S+L RS+W E + T VHV+NL+P   L  D P+R+WS+ ++ Y +
Sbjct: 572 RVRCLLSQSQLPRSFWGEALNTIVHVLNLTPCVPLEFDVPDRIWSNNEISYDH 624



 Score = 30.8 bits (68), Expect(2) = 2e-11
 Identities = 15/27 (55%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
 Frame = +1

Query: 4   GFVMSRLFPR-PQQNGIAERMNKTIVE 81
           GF   +  P+ PQ NG+AERMN+T+VE
Sbjct: 545 GFRHQKTPPKTPQLNGLAERMNRTLVE 571


>emb|CAN74160.1| hypothetical protein VITISV_018405 [Vitis vinifera]
          Length = 1302

 Score = 62.8 bits (151), Expect(2) = 2e-11
 Identities = 25/53 (47%), Positives = 38/53 (71%)
 Frame = +2

Query: 80  RMRCMLSHSKLFRSYWVEIMRTAVHVINLSPSKSLNSDYPERVWSSEDVDYGY 238
           R+RC+LS S+L RS+W E + T VHV+NL+P   L  D P+R+WS+ ++ Y +
Sbjct: 459 RVRCLLSQSQLPRSFWGEALNTVVHVLNLTPCVPLEFDVPDRIWSNNEISYDH 511



 Score = 30.4 bits (67), Expect(2) = 2e-11
 Identities = 12/16 (75%), Positives = 15/16 (93%)
 Frame = +1

Query: 34  PQQNGIAERMNKTIVE 81
           PQ NG+AERMN+T+VE
Sbjct: 443 PQLNGLAERMNRTLVE 458


>emb|CAN74178.1| hypothetical protein VITISV_029257 [Vitis vinifera]
          Length = 623

 Score = 62.0 bits (149), Expect(2) = 2e-11
 Identities = 28/51 (54%), Positives = 37/51 (72%)
 Frame = +2

Query: 80  RMRCMLSHSKLFRSYWVEIMRTAVHVINLSPSKSLNSDYPERVWSSEDVDY 232
           R+RCMLSH+KL +S+W E MRT V +INLSPS  L  D  ER+W+ + V +
Sbjct: 225 RIRCMLSHAKLPKSFWGEAMRTVVDLINLSPSYPLEGDILERIWTGKFVSF 275



 Score = 31.2 bits (69), Expect(2) = 2e-11
 Identities = 13/27 (48%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
 Frame = +1

Query: 4   GFVMSRLFPR-PQQNGIAERMNKTIVE 81
           G  + +  P+ PQQNG+ ERMN+TI +
Sbjct: 198 GIXLEKTVPKTPQQNGVVERMNRTICD 224