BLASTX nr result

ID: Coptis24_contig00019162 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019162
         (538 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263633.2| PREDICTED: uncharacterized protein LOC100255...   320   1e-85
emb|CBI22809.3| unnamed protein product [Vitis vinifera]              320   1e-85
emb|CAN73526.1| hypothetical protein VITISV_027513 [Vitis vinifera]   306   1e-81
ref|XP_002323595.1| predicted protein [Populus trichocarpa] gi|2...   292   2e-77
ref|XP_002532108.1| conserved hypothetical protein [Ricinus comm...   286   2e-75

>ref|XP_002263633.2| PREDICTED: uncharacterized protein LOC100255845 [Vitis vinifera]
          Length = 421

 Score =  320 bits (819), Expect = 1e-85
 Identities = 143/178 (80%), Positives = 164/178 (92%)
 Frame = +3

Query: 3   EYNATIEFYWAPFLVESNSDLHIKADPKERILRVDSIYKHAKNWLDVDILVFNTYVWWMS 182
           EYN TIEFYWAPFLVESNSDLHI  DP++RILRVDS+ KHAK+WL VDILVFNTYVWWMS
Sbjct: 192 EYNTTIEFYWAPFLVESNSDLHIIGDPRQRILRVDSVSKHAKHWLGVDILVFNTYVWWMS 251

Query: 183 GLKIKSLWGSFANGEDGYEELDAPIAYRIALKTWANWVDSTIDPNKTRVLFTTMSPTHMR 362
           GL+IKSLWGSFANGE+GYEELDAP+AYR  LKTWANWVDST++PNKTRV FTTMSPTHMR
Sbjct: 252 GLRIKSLWGSFANGEEGYEELDAPVAYRFGLKTWANWVDSTVNPNKTRVFFTTMSPTHMR 311

Query: 363 SLDWHNKKGIRCYNETRPVLERGYWGTGSDKRIMDAVNGVVERMTVPVSFINITQISE 536
           S DW+NK GI+CYNET+PV++RG+WGTGSDKRIM+ V+ +VE+M VPV+ INITQ+SE
Sbjct: 312 SADWNNKDGIKCYNETKPVMKRGHWGTGSDKRIMNVVDSIVEKMKVPVTVINITQMSE 369


>emb|CBI22809.3| unnamed protein product [Vitis vinifera]
          Length = 479

 Score =  320 bits (819), Expect = 1e-85
 Identities = 143/178 (80%), Positives = 164/178 (92%)
 Frame = +3

Query: 3   EYNATIEFYWAPFLVESNSDLHIKADPKERILRVDSIYKHAKNWLDVDILVFNTYVWWMS 182
           EYN TIEFYWAPFLVESNSDLHI  DP++RILRVDS+ KHAK+WL VDILVFNTYVWWMS
Sbjct: 250 EYNTTIEFYWAPFLVESNSDLHIIGDPRQRILRVDSVSKHAKHWLGVDILVFNTYVWWMS 309

Query: 183 GLKIKSLWGSFANGEDGYEELDAPIAYRIALKTWANWVDSTIDPNKTRVLFTTMSPTHMR 362
           GL+IKSLWGSFANGE+GYEELDAP+AYR  LKTWANWVDST++PNKTRV FTTMSPTHMR
Sbjct: 310 GLRIKSLWGSFANGEEGYEELDAPVAYRFGLKTWANWVDSTVNPNKTRVFFTTMSPTHMR 369

Query: 363 SLDWHNKKGIRCYNETRPVLERGYWGTGSDKRIMDAVNGVVERMTVPVSFINITQISE 536
           S DW+NK GI+CYNET+PV++RG+WGTGSDKRIM+ V+ +VE+M VPV+ INITQ+SE
Sbjct: 370 SADWNNKDGIKCYNETKPVMKRGHWGTGSDKRIMNVVDSIVEKMKVPVTVINITQMSE 427


>emb|CAN73526.1| hypothetical protein VITISV_027513 [Vitis vinifera]
          Length = 446

 Score =  306 bits (785), Expect = 1e-81
 Identities = 143/203 (70%), Positives = 165/203 (81%), Gaps = 25/203 (12%)
 Frame = +3

Query: 3   EYNATIEFYWAPFLVESNSDLHIKADPKERILRVDSIYKHAKNWLDVDILVFNTYVWWMS 182
           EYN TIEFYWAPFLVESNSDLHI  DP++RILRVDS+ KHAK+WL VDILVFNTYVWWMS
Sbjct: 192 EYNTTIEFYWAPFLVESNSDLHIIGDPRQRILRVDSVSKHAKHWLGVDILVFNTYVWWMS 251

Query: 183 GLKIKSLWGSFANGEDGYEELDAPIAYRIALKTWANWVDSTIDPNKTRVLFTTMSPTHMR 362
           GL+IKSLWGSFANGE+GYEELDAP+AYR  LKTWANWVDST++PNKTRV FTTMSPTHMR
Sbjct: 252 GLRIKSLWGSFANGEEGYEELDAPVAYRFGLKTWANWVDSTVNPNKTRVFFTTMSPTHMR 311

Query: 363 SL-------------------------DWHNKKGIRCYNETRPVLERGYWGTGSDKRIMD 467
           S+                         DW+NK GI+CYNET+PV++RG+WGTGSDKRIM+
Sbjct: 312 SVSLYPHLLDITNPRFNNHIPLLCRSADWNNKDGIKCYNETKPVMKRGHWGTGSDKRIMN 371

Query: 468 AVNGVVERMTVPVSFINITQISE 536
            V+ +VE+M VPV+ INITQ+SE
Sbjct: 372 VVDSIVEKMKVPVTVINITQMSE 394


>ref|XP_002323595.1| predicted protein [Populus trichocarpa] gi|222868225|gb|EEF05356.1|
           predicted protein [Populus trichocarpa]
          Length = 426

 Score =  292 bits (747), Expect = 2e-77
 Identities = 128/178 (71%), Positives = 158/178 (88%)
 Frame = +3

Query: 3   EYNATIEFYWAPFLVESNSDLHIKADPKERILRVDSIYKHAKNWLDVDILVFNTYVWWMS 182
           EY+ATIEFYWAPFL+ESN+D HI ADPK+RIL+VDSI KHAK+W  VD LVFNTYVWWMS
Sbjct: 197 EYDATIEFYWAPFLIESNTDHHIIADPKKRILKVDSIDKHAKHWGGVDFLVFNTYVWWMS 256

Query: 183 GLKIKSLWGSFANGEDGYEELDAPIAYRIALKTWANWVDSTIDPNKTRVLFTTMSPTHMR 362
           G+++K+LWGSFANGE+GYEELD P+AY+I LKTWANW+DS I+PNKTRV FTTMSPTH R
Sbjct: 257 GIRLKTLWGSFANGEEGYEELDTPVAYKIGLKTWANWIDSNINPNKTRVFFTTMSPTHTR 316

Query: 363 SLDWHNKKGIRCYNETRPVLERGYWGTGSDKRIMDAVNGVVERMTVPVSFINITQISE 536
           S DW+N +G++C+NET+PVL++ YWG+GSDKR+M  V  + ++M VPV+FINITQ+SE
Sbjct: 317 SEDWNNTEGLKCFNETKPVLKKKYWGSGSDKRMMSVVASIGKKMKVPVTFINITQLSE 374


>ref|XP_002532108.1| conserved hypothetical protein [Ricinus communis]
           gi|223528211|gb|EEF30270.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 416

 Score =  286 bits (731), Expect = 2e-75
 Identities = 126/178 (70%), Positives = 155/178 (87%)
 Frame = +3

Query: 3   EYNATIEFYWAPFLVESNSDLHIKADPKERILRVDSIYKHAKNWLDVDILVFNTYVWWMS 182
           EY+ATIEF+WAPFL+ESN+DL I  DPK+RI++VDSI  HAK+W  VD +VFNTYVWWMS
Sbjct: 187 EYDATIEFHWAPFLIESNTDLKIIGDPKKRIMKVDSIENHAKHWKGVDFIVFNTYVWWMS 246

Query: 183 GLKIKSLWGSFANGEDGYEELDAPIAYRIALKTWANWVDSTIDPNKTRVLFTTMSPTHMR 362
           GL++K+LWGSFANGE+GYEELD PIAY+I LKTWANWVDS I+PNKTRV FTTMSPTH R
Sbjct: 247 GLRLKTLWGSFANGEEGYEELDTPIAYKIGLKTWANWVDSNINPNKTRVFFTTMSPTHTR 306

Query: 363 SLDWHNKKGIRCYNETRPVLERGYWGTGSDKRIMDAVNGVVERMTVPVSFINITQISE 536
           S DW+N KGI+C+NET+PV+++ +WG+GSDKRIM  V  +V +M VPV+ +NITQ+SE
Sbjct: 307 SEDWNNTKGIKCFNETKPVMKKRHWGSGSDKRIMSVVASIVGKMKVPVTVLNITQLSE 364


Top