BLASTX nr result

ID: Coptis24_contig00019158 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019158
         (345 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631365.1| PREDICTED: probable FKBP-type peptidyl-proly...   107   1e-21
ref|XP_002267989.1| PREDICTED: probable FKBP-type peptidyl-proly...   107   1e-21
ref|NP_196845.1| putative FKBP-type peptidyl-prolyl cis-trans is...   105   5e-21
ref|XP_002873610.1| immunophilin [Arabidopsis lyrata subsp. lyra...   103   1e-20
dbj|BAD42981.1| unknown protein [Arabidopsis thaliana]                102   4e-20

>ref|XP_003631365.1| PREDICTED: probable FKBP-type peptidyl-prolyl cis-trans isomerase
           7, chloroplastic isoform 2 [Vitis vinifera]
          Length = 234

 Score =  107 bits (267), Expect = 1e-21
 Identities = 49/69 (71%), Positives = 58/69 (84%)
 Frame = -1

Query: 207 FDRREALFSTIGILMGALWHSREGEVAVASDYADMPAIRGKDYGKTKMRYPDYVETNSGL 28
           F RREA   +IG+L GA+W++ E EVAVAS++ DMPA+RGKDYGKTKMR+PDY ET SGL
Sbjct: 61  FGRREAAMLSIGLLAGAIWNASENEVAVASEFTDMPALRGKDYGKTKMRFPDYTETASGL 120

Query: 27  QYKDLRAGS 1
           QYKDLR GS
Sbjct: 121 QYKDLRVGS 129


>ref|XP_002267989.1| PREDICTED: probable FKBP-type peptidyl-prolyl cis-trans isomerase
           7, chloroplastic isoform 1 [Vitis vinifera]
           gi|296085536|emb|CBI29268.3| unnamed protein product
           [Vitis vinifera]
          Length = 257

 Score =  107 bits (267), Expect = 1e-21
 Identities = 49/69 (71%), Positives = 58/69 (84%)
 Frame = -1

Query: 207 FDRREALFSTIGILMGALWHSREGEVAVASDYADMPAIRGKDYGKTKMRYPDYVETNSGL 28
           F RREA   +IG+L GA+W++ E EVAVAS++ DMPA+RGKDYGKTKMR+PDY ET SGL
Sbjct: 61  FGRREAAMLSIGLLAGAIWNASENEVAVASEFTDMPALRGKDYGKTKMRFPDYTETASGL 120

Query: 27  QYKDLRAGS 1
           QYKDLR GS
Sbjct: 121 QYKDLRVGS 129


>ref|NP_196845.1| putative FKBP-type peptidyl-prolyl cis-trans isomerase 7
           [Arabidopsis thaliana]
           gi|75335665|sp|Q9LYR5.1|FKB19_ARATH RecName:
           Full=Peptidyl-prolyl cis-trans isomerase FKBP19,
           chloroplastic; Short=PPIase FKBP19; AltName:
           Full=FK506-binding protein 19; Short=AtFKBP19; AltName:
           Full=Immunophilin FKBP19; AltName: Full=Rotamase; Flags:
           Precursor gi|7543908|emb|CAB87148.1| putative protein
           [Arabidopsis thaliana] gi|46931302|gb|AAT06455.1|
           At5g13410 [Arabidopsis thaliana]
           gi|222423171|dbj|BAH19563.1| AT5G13410 [Arabidopsis
           thaliana] gi|332004508|gb|AED91891.1| putative FKBP-type
           peptidyl-prolyl cis-trans isomerase 7 [Arabidopsis
           thaliana]
          Length = 256

 Score =  105 bits (261), Expect = 5e-21
 Identities = 60/126 (47%), Positives = 81/126 (64%), Gaps = 11/126 (8%)
 Frame = -1

Query: 345 SISAVASLPNSSTLFSTKKPRANRLLQWKRVTTIS-----LRNS-----VVSSLRDFDRR 196
           SIS+    P S+ L  T      R     R+   S     LR+S      V++  +FDRR
Sbjct: 3   SISSFGCFPQSTALAGTSSTTRCRTTVAARLADQSDDFAPLRSSGGNCGCVNNSGEFDRR 62

Query: 195 EALFSTIGILMGAL-WHSREGEVAVASDYADMPAIRGKDYGKTKMRYPDYVETNSGLQYK 19
           + L S++G+L+GAL + S++G+ A AS +ADMPA++GKDYGKTKM+YPDY ET SGLQYK
Sbjct: 63  KLLVSSVGLLIGALSYDSKDGDFASASQFADMPALKGKDYGKTKMKYPDYTETQSGLQYK 122

Query: 18  DLRAGS 1
           DLR G+
Sbjct: 123 DLRVGT 128


>ref|XP_002873610.1| immunophilin [Arabidopsis lyrata subsp. lyrata]
           gi|297319447|gb|EFH49869.1| immunophilin [Arabidopsis
           lyrata subsp. lyrata]
          Length = 256

 Score =  103 bits (257), Expect = 1e-20
 Identities = 59/126 (46%), Positives = 80/126 (63%), Gaps = 11/126 (8%)
 Frame = -1

Query: 345 SISAVASLPNSSTLFSTKKPRANRLLQWKRVTTIS-----LRNS-----VVSSLRDFDRR 196
           SIS+    P S+ L  T      R     R+   S     LR+S      V +  +FDRR
Sbjct: 3   SISSFGCFPQSTALTGTSSTTRCRTAVAARLADQSDEFSPLRSSGGNCGCVHNSGEFDRR 62

Query: 195 EALFSTIGILMGAL-WHSREGEVAVASDYADMPAIRGKDYGKTKMRYPDYVETNSGLQYK 19
           + L S++G+L+GAL + +++G+ A AS +ADMPA++GKDYGKTKM+YPDY ET SGLQYK
Sbjct: 63  KLLLSSVGLLIGALSYDAKDGDFASASQFADMPALKGKDYGKTKMKYPDYTETQSGLQYK 122

Query: 18  DLRAGS 1
           DLR G+
Sbjct: 123 DLRVGT 128


>dbj|BAD42981.1| unknown protein [Arabidopsis thaliana]
          Length = 255

 Score =  102 bits (253), Expect = 4e-20
 Identities = 47/76 (61%), Positives = 64/76 (84%), Gaps = 1/76 (1%)
 Frame = -1

Query: 225 VSSLRDFDRREALFSTIGILMGAL-WHSREGEVAVASDYADMPAIRGKDYGKTKMRYPDY 49
           V++  +FDRR+ L S++G+L+GAL + S++G+ A AS +ADMPA++GKDYGKTKM+YPDY
Sbjct: 52  VNNSGEFDRRKLLVSSVGLLIGALSYDSKDGDFASASQFADMPALKGKDYGKTKMKYPDY 111

Query: 48  VETNSGLQYKDLRAGS 1
            ET SGLQYKDLR G+
Sbjct: 112 TETQSGLQYKDLRVGT 127


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