BLASTX nr result
ID: Coptis24_contig00019153
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00019153 (2059 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN80445.1| hypothetical protein VITISV_043284 [Vitis vinifera] 329 2e-87 ref|XP_003633804.1| PREDICTED: RING-H2 finger protein ATL46-like... 328 3e-87 ref|XP_002265075.2| PREDICTED: RING-H2 finger protein ATL46-like... 319 2e-84 gb|ACI42847.1| RING finger protein [Glycine max] 318 3e-84 ref|XP_002521028.1| ring finger protein, putative [Ricinus commu... 318 5e-84 >emb|CAN80445.1| hypothetical protein VITISV_043284 [Vitis vinifera] Length = 1090 Score = 329 bits (844), Expect = 2e-87 Identities = 177/308 (57%), Positives = 207/308 (67%), Gaps = 4/308 (1%) Frame = +2 Query: 533 SGLLHLLVRFLVKQPXXXXXXX-NRYPEMSGSDAXXXXXXXXXXXXDSGLDQAFIDALPV 709 SGLLHLLVRFL++ P NRYPE+S SDA DSGLDQAFIDALPV Sbjct: 788 SGLLHLLVRFLIRHPSSSTSSQSNRYPEISESDALQRQLQQLFHLHDSGLDQAFIDALPV 847 Query: 710 FLYKEVMGLKEPFDCAVCLCEFSEQDKLRLLPLCGHAFHINCIDTWLLSNSTCPLCRGTL 889 FLYKE++GLKEPFDCAVCLCEFSE+DKLRLLP+C HAFHINCIDTWLLSNSTCPLCRGTL Sbjct: 848 FLYKEIVGLKEPFDCAVCLCEFSEKDKLRLLPVCSHAFHINCIDTWLLSNSTCPLCRGTL 907 Query: 890 FTPGLAIENPVFDVDLQREEDGRVVQGDCENGFXXXXXXXXXXXXXXXXXXYHVRLGKFK 1069 F PG ++ENP+FD D REEDG G ENGF + VRLGKF+ Sbjct: 908 FAPGFSMENPIFDFDDLREEDG--FPGHGENGFASGPKTVEIEEVVGEKGVFPVRLGKFR 965 Query: 1070 NVSNVGGGVAEETGIAETSSSHLDARRCYSMGSFQYVVADSTLQVAALSHDKDVSGNLKL 1249 V++ G ET ETSSS+LDARRCYSMGSFQYVV DS L+VA + G + Sbjct: 966 KVADXSG----ETAGGETSSSNLDARRCYSMGSFQYVVGDSILRVALNHEQQHPDGKIVK 1021 Query: 1250 GERHNTVSSLADGDVDGKKLSGASKGESFSVSKIWLWSKKGSYPGSSN---PNMNSLNIG 1420 G +N S+ + + +G + S +KG+S+SVSKIWLWSKKG +P SS+ M SLN+ Sbjct: 1022 GIENNANPSINE-ETEGTRNSFVTKGDSYSVSKIWLWSKKGKFPSSSDNTQTGMPSLNVD 1080 Query: 1421 LPLTARTQ 1444 LP R Q Sbjct: 1081 LPWMGRKQ 1088 >ref|XP_003633804.1| PREDICTED: RING-H2 finger protein ATL46-like [Vitis vinifera] Length = 397 Score = 328 bits (842), Expect = 3e-87 Identities = 177/308 (57%), Positives = 207/308 (67%), Gaps = 4/308 (1%) Frame = +2 Query: 533 SGLLHLLVRFLVKQPXXXXXXX-NRYPEMSGSDAXXXXXXXXXXXXDSGLDQAFIDALPV 709 SGLLHLLVRFL++ P NRYPE+S SDA DSGLDQAFIDALPV Sbjct: 95 SGLLHLLVRFLIRHPSSSTSSQSNRYPEISESDALQRQLQQLFHLHDSGLDQAFIDALPV 154 Query: 710 FLYKEVMGLKEPFDCAVCLCEFSEQDKLRLLPLCGHAFHINCIDTWLLSNSTCPLCRGTL 889 FLYKE++GLKEPFDCAVCLCEFSE+DKLRLLP+C HAFHINCIDTWLLSNSTCPLCRGTL Sbjct: 155 FLYKEIVGLKEPFDCAVCLCEFSEKDKLRLLPVCSHAFHINCIDTWLLSNSTCPLCRGTL 214 Query: 890 FTPGLAIENPVFDVDLQREEDGRVVQGDCENGFXXXXXXXXXXXXXXXXXXYHVRLGKFK 1069 F PG ++ENP+FD D REEDG G ENGF + VRLGKF+ Sbjct: 215 FAPGFSMENPIFDFDDLREEDG--FPGHGENGFASGPKTVEIEEVVGEKGVFPVRLGKFR 272 Query: 1070 NVSNVGGGVAEETGIAETSSSHLDARRCYSMGSFQYVVADSTLQVAALSHDKDVSGNLKL 1249 V++ G ET ETSSS+LDARRCYSMGSFQYVV DS L+VA + G + Sbjct: 273 KVADGSG----ETAGGETSSSNLDARRCYSMGSFQYVVGDSILRVALNHEQQHPDGKIVK 328 Query: 1250 GERHNTVSSLADGDVDGKKLSGASKGESFSVSKIWLWSKKGSYPGSSN---PNMNSLNIG 1420 G +N S+ + + +G + S +KG+S+SVSKIWLWSKKG +P SS+ M SLN+ Sbjct: 329 GIENNANPSINE-ETEGTRNSFVTKGDSYSVSKIWLWSKKGKFPSSSDNTQTGMPSLNVD 387 Query: 1421 LPLTARTQ 1444 LP R Q Sbjct: 388 LPWMGRKQ 395 >ref|XP_002265075.2| PREDICTED: RING-H2 finger protein ATL46-like [Vitis vinifera] Length = 393 Score = 319 bits (818), Expect = 2e-84 Identities = 179/326 (54%), Positives = 208/326 (63%), Gaps = 20/326 (6%) Frame = +2 Query: 533 SGLLHLLVRFLVK-QPXXXXXXXNRYPEMSGSDAXXXXXXXXXXXXDSGLDQAFIDALPV 709 SGLLHLLVRFLVK + NRY E S S A DSGLDQAFIDALPV Sbjct: 72 SGLLHLLVRFLVKHRSSSSISQSNRYQETSSSHAFQRQLQQLFHLHDSGLDQAFIDALPV 131 Query: 710 FLYKEVMGLKEPFDCAVCLCEFSEQDKLRLLPLCGHAFHINCIDTWLLSNSTCPLCRGTL 889 FLYK+++GLKEPFDCAVCLCEFS++DKLRLLP+C HAFHI CIDTWLLSNSTCPLCRGTL Sbjct: 132 FLYKDIVGLKEPFDCAVCLCEFSQEDKLRLLPMCSHAFHIECIDTWLLSNSTCPLCRGTL 191 Query: 890 FTPGLAIENPVFDVDLQREEDGRVVQGDCENGFXXXXXXXXXXXXXXXXXXYHVRLGKFK 1069 F PGLA+EN VFD + REE G GD + + VRLGKF+ Sbjct: 192 FNPGLAMENSVFDFEDSREEGGLSSNGDGVSS----AQKPPEDDIASEKRVFSVRLGKFR 247 Query: 1070 NVSNVGGGVA--------------EETGIAETSSSHLDARRCYSMGSFQYVVADSTLQVA 1207 ++ GGG E G ETS S+LDARRC+SMGSFQYVVA+S LQVA Sbjct: 248 GLNGGGGGGGGGGGGGGGGEGEGEGERGGGETSCSNLDARRCFSMGSFQYVVANSDLQVA 307 Query: 1208 ALSHDKDVSGN----LKLGERHNTVSSLADGDVDGKKLSGASKGESFSVSKIWLWSKKGS 1375 + D + L G +T +S DGDV+GKK+S SK ESFSVSKIWLW KKG Sbjct: 308 LCPNRADAGSDAVVKLMKGRGGHTGNSSTDGDVEGKKISIGSKDESFSVSKIWLWPKKGK 367 Query: 1376 YPGSSNPNMN-SLNIGLPLTARTQGS 1450 +P SS+ ++ S+N+G P T RTQ S Sbjct: 368 FPSSSDTHIGPSVNVGFPWTERTQAS 393 >gb|ACI42847.1| RING finger protein [Glycine max] Length = 392 Score = 318 bits (815), Expect = 3e-84 Identities = 175/316 (55%), Positives = 208/316 (65%), Gaps = 10/316 (3%) Frame = +2 Query: 533 SGLLHLLVRFLVKQPXXXXXXXNRYPEMSGSDAXXXXXXXXXXXXDSGLDQAFIDALPVF 712 SGLLHLL+RFL+K P NR+ E+S SDA DSGLDQAFIDALPVF Sbjct: 83 SGLLHLLIRFLIKHPSSASAQSNRHQELSTSDALQRQLQQLFHLHDSGLDQAFIDALPVF 142 Query: 713 LYKEVMGLKEPFDCAVCLCEFSEQDKLRLLPLCGHAFHINCIDTWLLSNSTCPLCRGTLF 892 YKE++GLKEPFDCAVCLCEFSE+DKLRLLP+C HAFHI+CIDTWLLSNSTCPLCRGTL Sbjct: 143 QYKEIVGLKEPFDCAVCLCEFSEKDKLRLLPMCSHAFHISCIDTWLLSNSTCPLCRGTLL 202 Query: 893 TPGLAIENPVFDVDLQREEDGRVVQGDCENGF-XXXXXXXXXXXXXXXXXXYHVRLGKFK 1069 T G +IENP+FD D RE++G G ENGF + VRLGKFK Sbjct: 203 TQGFSIENPIFDFDDLREDEGCPCNG--ENGFNTRQKTVVVEESVEKEKGVFPVRLGKFK 260 Query: 1070 NVSNVGGGVAEETGIAETSSSHLDARRCYSMGSFQYVVADSTLQVAALSHDKDVSGNL-- 1243 +S GGG E+ + ETSSS+LDARRCYSMGS+QYVV +S L+V L+HD+ G + Sbjct: 261 KLSVKGGG---ESEVGETSSSNLDARRCYSMGSYQYVVGNSDLRV-TLNHDEIGKGQVTR 316 Query: 1244 --KLGERHNTVSSLADGDVDGKKLSGASKGESFSVSKIWLWSKKGSYPGS-----SNPNM 1402 K E + S+ +GDV+ KK+S SKG+SFSVSKIWLW KKG P S P Sbjct: 317 LTKGMELDDGKVSVEEGDVEAKKISSVSKGDSFSVSKIWLWPKKGKLPTSLDGQFGRPMP 376 Query: 1403 NSLNIGLPLTARTQGS 1450 + LN G P +G+ Sbjct: 377 SYLNTGFPRMREPEGA 392 >ref|XP_002521028.1| ring finger protein, putative [Ricinus communis] gi|223539865|gb|EEF41445.1| ring finger protein, putative [Ricinus communis] Length = 374 Score = 318 bits (814), Expect = 5e-84 Identities = 182/313 (58%), Positives = 209/313 (66%), Gaps = 10/313 (3%) Frame = +2 Query: 533 SGLLHLLVRFLVKQ---PXXXXXXXNRYPEMSGSDAXXXXXXXXXXXXDSGLDQAFIDAL 703 SGLLHLLVRFL+K NRYPEMSGSDA DSGLDQAFIDAL Sbjct: 67 SGLLHLLVRFLIKHRSSSSSSVSESNRYPEMSGSDAFQRQLQQLFHLHDSGLDQAFIDAL 126 Query: 704 PVFLYKEVMGLKEPFDCAVCLCEFSEQDKLRLLPLCGHAFHINCIDTWLLSNSTCPLCRG 883 PVFLYKE+MGLKEPFDCAVCLCE+SE+DKLRLLP C HAFHI+CIDTWLLSNSTCPLCRG Sbjct: 127 PVFLYKEIMGLKEPFDCAVCLCEYSEKDKLRLLPACSHAFHIDCIDTWLLSNSTCPLCRG 186 Query: 884 TLFTPGLAIENPVFDVDLQREEDGRVVQGDCENGFXXXXXXXXXXXXXXXXXXYHVRLGK 1063 TL+TPGL+ ENPVFD + REE+G + + NG + VRLGK Sbjct: 187 TLYTPGLSFENPVFDFEESREEEG--LSSNVGNGI-SVGQKPAENERINSKRVFSVRLGK 243 Query: 1064 FKNVSNVGGGVAEETGIAETSSSHLDARRCYSMGSFQYVVADSTLQVAALSHDKDVSGNL 1243 FK+ SNV + ETSSS+LDARRC+SMGS+QYVVAD LQVA +G+ Sbjct: 244 FKS-SNV---EVDRVVEGETSSSNLDARRCFSMGSYQYVVADLNLQVALCPGRNVGTGSF 299 Query: 1244 KL-----GERHNTVSSLADGDVDGKKLSGASKGESFSVSKIWLWSKKGSYPGSSNPNMNS 1408 KL G+ NT SS GD +GKK++ SKGESFSVSKIW WS+KG P SS+ M S Sbjct: 300 KLVKSKNGQNGNT-SSNDIGDAEGKKINIRSKGESFSVSKIWQWSRKGKLPSSSDTYMGS 358 Query: 1409 --LNIGLPLTART 1441 L +GLP + RT Sbjct: 359 SPLAVGLPWSDRT 371