BLASTX nr result
ID: Coptis24_contig00019143
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00019143 (492 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI39646.3| unnamed protein product [Vitis vinifera] 120 9e-26 gb|AFW79695.1| hypothetical protein ZEAMMB73_397300 [Zea mays] 114 1e-23 ref|XP_004135569.1| PREDICTED: zinc finger CCCH domain-containin... 112 2e-23 ref|XP_002455379.1| hypothetical protein SORBIDRAFT_03g009590 [S... 112 2e-23 ref|NP_001236361.1| uncharacterized protein LOC100527203 [Glycin... 112 4e-23 >emb|CBI39646.3| unnamed protein product [Vitis vinifera] Length = 152 Score = 120 bits (302), Expect = 9e-26 Identities = 59/88 (67%), Positives = 63/88 (71%), Gaps = 11/88 (12%) Frame = -3 Query: 490 KYYCDYCEKQFQDTASARKRHLQGIQHQRAKAQWYDSF------QIYESDRRVCNHFVRT 329 KY+CDYC+KQFQDT SARKRHLQG+QHQRAKA WYDSF Q + VCN FVRT Sbjct: 5 KYHCDYCDKQFQDTPSARKRHLQGLQHQRAKALWYDSFRDPNQIQAEGYGKGVCNRFVRT 64 Query: 328 GSCQYGDSCKYFHP-----NLNTHIRPV 260 G CQYGDSCKYFHP N NT PV Sbjct: 65 GFCQYGDSCKYFHPKQSLQNTNTQSIPV 92 >gb|AFW79695.1| hypothetical protein ZEAMMB73_397300 [Zea mays] Length = 166 Score = 114 bits (284), Expect = 1e-23 Identities = 49/85 (57%), Positives = 61/85 (71%), Gaps = 14/85 (16%) Frame = -3 Query: 490 KYYCDYCEKQFQDTASARKRHLQGIQHQRAKAQWYDSFQIYESD--------------RR 353 KYYCDYC+KQFQDT +ARKRHLQG+QHQRA+A WYDS + + + Sbjct: 5 KYYCDYCDKQFQDTPAARKRHLQGVQHQRARALWYDSIRHQDQHGGASSLLLPDGTLAKG 64 Query: 352 VCNHFVRTGSCQYGDSCKYFHPNLN 278 +C+HFVRTG+C+YGDSC+YFHP N Sbjct: 65 ICHHFVRTGACKYGDSCRYFHPKPN 89 >ref|XP_004135569.1| PREDICTED: zinc finger CCCH domain-containing protein 3-like [Cucumis sativus] gi|449508616|ref|XP_004163363.1| PREDICTED: zinc finger CCCH domain-containing protein 3-like [Cucumis sativus] Length = 156 Score = 112 bits (281), Expect = 2e-23 Identities = 49/79 (62%), Positives = 57/79 (72%), Gaps = 8/79 (10%) Frame = -3 Query: 490 KYYCDYCEKQFQDTASARKRHLQGIQHQRAKAQWYDSFQIYESD--------RRVCNHFV 335 KYYCDYC+KQFQDT ARKRHLQ + HQ+AKA W+DSF+ + R+CN F+ Sbjct: 5 KYYCDYCDKQFQDTPFARKRHLQSLSHQKAKALWFDSFKDFNQSFPHSFHFRPRICNRFL 64 Query: 334 RTGSCQYGDSCKYFHPNLN 278 TG CQYGDSCKYFHPN N Sbjct: 65 STGFCQYGDSCKYFHPNNN 83 >ref|XP_002455379.1| hypothetical protein SORBIDRAFT_03g009590 [Sorghum bicolor] gi|241927354|gb|EES00499.1| hypothetical protein SORBIDRAFT_03g009590 [Sorghum bicolor] Length = 164 Score = 112 bits (281), Expect = 2e-23 Identities = 48/82 (58%), Positives = 60/82 (73%), Gaps = 14/82 (17%) Frame = -3 Query: 490 KYYCDYCEKQFQDTASARKRHLQGIQHQRAKAQWYDSFQIYESD--------------RR 353 KYYCDYC+KQFQDT +AR+RHLQG+QHQRA+A WYDS + E + Sbjct: 5 KYYCDYCDKQFQDTPAARRRHLQGVQHQRARALWYDSIRHQEQHGGVSSLLLPDGTLAKG 64 Query: 352 VCNHFVRTGSCQYGDSCKYFHP 287 +C+HFVRTG+C+YGDSC+YFHP Sbjct: 65 ICHHFVRTGTCKYGDSCRYFHP 86 >ref|NP_001236361.1| uncharacterized protein LOC100527203 [Glycine max] gi|255631776|gb|ACU16255.1| unknown [Glycine max] Length = 127 Score = 112 bits (279), Expect = 4e-23 Identities = 56/123 (45%), Positives = 72/123 (58%), Gaps = 11/123 (8%) Frame = -3 Query: 490 KYYCDYCEKQFQDTASARKRHLQGIQHQRAKAQWYDSFQIYE----SDRRVCNHFVRTGS 323 KYYCDYC+K FQDT + RKRH+QGIQH +AKA+WYDSF+ + +R +C HFV TG Sbjct: 5 KYYCDYCDKLFQDTPADRKRHVQGIQHHQAKARWYDSFKQQQIPPIPNRPLCFHFVNTGF 64 Query: 322 CQYGDSCKYFHPNLNTHIRPVDLIRDGT-------GVSXXXXXXXXXXXXXXXXXXXPFV 164 C+YGDSCKY HP N ++R ++ + GVS PF+ Sbjct: 65 CRYGDSCKYLHPVPNNNVRQPPIVTTPSPSPGSVVGVSFGNLPPSLQPPPDGVYLHLPFL 124 Query: 163 DWG 155 DWG Sbjct: 125 DWG 127