BLASTX nr result

ID: Coptis24_contig00019140 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019140
         (361 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632052.1| PREDICTED: probable glucan endo-1,3-beta-glu...   167   6e-40
ref|XP_002520622.1| Glucan endo-1,3-beta-glucosidase precursor, ...   164   5e-39
ref|XP_002298669.1| predicted protein [Populus trichocarpa] gi|2...   164   5e-39
ref|XP_002334812.1| predicted protein [Populus trichocarpa] gi|2...   164   9e-39
ref|XP_002534357.1| Glucan endo-1,3-beta-glucosidase precursor, ...   159   2e-37

>ref|XP_003632052.1| PREDICTED: probable glucan endo-1,3-beta-glucosidase A6-like [Vitis
           vinifera] gi|296089651|emb|CBI39470.3| unnamed protein
           product [Vitis vinifera]
          Length = 467

 Score =  167 bits (424), Expect = 6e-40
 Identities = 75/120 (62%), Positives = 96/120 (80%)
 Frame = +1

Query: 1   RNLIRKMTSKSSAGTPARPAAVIPTFIFSLYNENQKPGPGTERNFGLLHPNGTRVYDVDL 180
           RNLI+++ +K   GTPARP +V+PTFIFSLYNENQK GPGTER++GLL+PN + VY +DL
Sbjct: 293 RNLIKRLNAKPPVGTPARPGSVLPTFIFSLYNENQKGGPGTERHWGLLYPNESSVYQIDL 352

Query: 181 TGKQTESDYDPIPLGTNNAPYRGKIWCVVARDREVSERELGDAISYACGQGNGTCKALQP 360
           TG+  ES+Y P+P   NN PY+GKIWCVVA+    +  ELG A++YACGQGNGTC+ +QP
Sbjct: 353 TGETPESEYPPLPAPENNEPYKGKIWCVVAKG--ANRTELGSALTYACGQGNGTCEPVQP 410


>ref|XP_002520622.1| Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus
           communis] gi|223540183|gb|EEF41758.1| Glucan
           endo-1,3-beta-glucosidase precursor, putative [Ricinus
           communis]
          Length = 463

 Score =  164 bits (416), Expect = 5e-39
 Identities = 73/120 (60%), Positives = 96/120 (80%)
 Frame = +1

Query: 1   RNLIRKMTSKSSAGTPARPAAVIPTFIFSLYNENQKPGPGTERNFGLLHPNGTRVYDVDL 180
           RNLI+KMT+K   GTPARP  VIPTFIFSLYNEN+K GPGTER++GLL+ NGT +Y++DL
Sbjct: 293 RNLIKKMTAKPPIGTPARPGVVIPTFIFSLYNENRKTGPGTERHWGLLNANGTAIYEIDL 352

Query: 181 TGKQTESDYDPIPLGTNNAPYRGKIWCVVARDREVSERELGDAISYACGQGNGTCKALQP 360
           +GKQ +S+Y  +P   NN PY+GK+WC+ A+  +++  ELG A+++AC QGNGTC AL P
Sbjct: 353 SGKQADSEYRALPQPNNNKPYKGKLWCIAAQGADLT--ELGTAVTFACSQGNGTCDALAP 410


>ref|XP_002298669.1| predicted protein [Populus trichocarpa] gi|222845927|gb|EEE83474.1|
           predicted protein [Populus trichocarpa]
          Length = 462

 Score =  164 bits (416), Expect = 5e-39
 Identities = 72/120 (60%), Positives = 95/120 (79%)
 Frame = +1

Query: 1   RNLIRKMTSKSSAGTPARPAAVIPTFIFSLYNENQKPGPGTERNFGLLHPNGTRVYDVDL 180
           RNL+RKMT+ +  GTPARP ++IPTFIF+LY+EN+K GPGTER++GLLHPNGT +Y +DL
Sbjct: 288 RNLVRKMTASNPTGTPARPGSLIPTFIFALYDENRKTGPGTERHWGLLHPNGTSIYQIDL 347

Query: 181 TGKQTESDYDPIPLGTNNAPYRGKIWCVVARDREVSERELGDAISYACGQGNGTCKALQP 360
           TGK+  SDY+ +P   NN PY+GK+WC+ A   EV+  EL  A+++AC QGNGTC +L P
Sbjct: 348 TGKRASSDYETLPPAQNNVPYKGKLWCIAA--PEVNLTELESALTFACNQGNGTCDSLTP 405


>ref|XP_002334812.1| predicted protein [Populus trichocarpa] gi|222874963|gb|EEF12094.1|
           predicted protein [Populus trichocarpa]
          Length = 465

 Score =  164 bits (414), Expect = 9e-39
 Identities = 75/120 (62%), Positives = 98/120 (81%), Gaps = 1/120 (0%)
 Frame = +1

Query: 1   RNLIRKMTSKSSAGTPARPAAVIPTFIFSLYNENQKPGPGTERNFGLLHPNGTRVYDVDL 180
           RN+I+K+T+K + GTPARP  VIP+ IF+LYNENQKPGPGTER+FGLL+PNGT++Y++DL
Sbjct: 290 RNVIKKLTTKPAIGTPARPGWVIPSIIFALYNENQKPGPGTERHFGLLYPNGTKIYEIDL 349

Query: 181 TGKQTESDY-DPIPLGTNNAPYRGKIWCVVARDREVSERELGDAISYACGQGNGTCKALQ 357
           +G    S+Y  P+P  TNN PY+GKIWC+VA+   V+E  +GDA+SYAC QGN TC A+Q
Sbjct: 350 SGDTPLSEYTKPLPAPTNNEPYKGKIWCMVAKG--VNETAVGDALSYACSQGNKTCDAIQ 407


>ref|XP_002534357.1| Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus
           communis] gi|223525432|gb|EEF28022.1| Glucan
           endo-1,3-beta-glucosidase precursor, putative [Ricinus
           communis]
          Length = 388

 Score =  159 bits (402), Expect = 2e-37
 Identities = 68/121 (56%), Positives = 99/121 (81%), Gaps = 1/121 (0%)
 Frame = +1

Query: 1   RNLIRKMTSKSSAGTPARPAAVIPTFIFSLYNENQKPGPGTERNFGLLHPNGTRVYDVDL 180
           RN+++++T+K + GTPARP + +PTFIF+LYNENQKPGPGTER+FGLL+PNG+ +Y++DL
Sbjct: 212 RNVVKRLTTKPAIGTPARPGSGLPTFIFALYNENQKPGPGTERHFGLLYPNGSNIYEIDL 271

Query: 181 TGKQTESDY-DPIPLGTNNAPYRGKIWCVVARDREVSERELGDAISYACGQGNGTCKALQ 357
           +G+  +S+Y +P+P+ TNN PY+GKIWCVVA+    ++  +  A++YAC QGN TC  +Q
Sbjct: 272 SGETLDSEYKEPLPVPTNNEPYKGKIWCVVAKG--ANKTAVAGALTYACSQGNKTCDPIQ 329

Query: 358 P 360
           P
Sbjct: 330 P 330


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