BLASTX nr result
ID: Coptis24_contig00019124
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00019124 (809 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002274185.2| PREDICTED: uncharacterized protein LOC100242... 300 2e-79 ref|XP_002869971.1| hypothetical protein ARALYDRAFT_914700 [Arab... 263 3e-68 ref|XP_002332130.1| predicted protein [Populus trichocarpa] gi|2... 261 2e-67 ref|NP_193700.2| Mitochondrial transcription termination factor ... 258 1e-66 dbj|BAF01901.1| hypothetical protein [Arabidopsis thaliana] 258 1e-66 >ref|XP_002274185.2| PREDICTED: uncharacterized protein LOC100242606 [Vitis vinifera] Length = 564 Score = 300 bits (768), Expect = 2e-79 Identities = 157/270 (58%), Positives = 201/270 (74%), Gaps = 1/270 (0%) Frame = +1 Query: 1 KKVYVLISMLLKVGLKMNDIGTLFLEYPRILAGKFAENLLQAMQFMSEIGMEAEDISKLV 180 KK YVLI LLK+G KM + +LFL+ P+IL+ K +NL QA+ F+ EIGM+ EDI +V Sbjct: 286 KKFYVLIGRLLKLGFKMKGVLSLFLQNPQILSKKCVKNLWQAVGFLFEIGMKVEDIVSIV 345 Query: 181 RSHTQVLGSSSLRKPVTVLSDLNVGPDRLSEMIMEDPTKFTSLASRWK-PIVKKVAVEKG 357 SH Q+L S SL+ P TVL L VG + L ++I EDP++ SLAS+ K ++ V + Sbjct: 346 SSHVQLLCSCSLKGPRTVLRSLKVGREGLCQIIKEDPSELLSLASKSKINSMEHVTCQSP 405 Query: 358 VYDMEKTAFLLSIGYVENSEEMVKALKRFRGRGDQLQQRFDCLVKAGLDCHTVSNMVKAA 537 +EKT FLL +GYVENS+EM KALK FRGRGDQLQ+RFDCLV+AGLDC+ VSNM+K A Sbjct: 406 SKHLEKTTFLLRLGYVENSDEMFKALKLFRGRGDQLQERFDCLVQAGLDCNVVSNMIKQA 465 Query: 538 PPVLNLSEHLLEMKIEYLVKDLGYPLQSLEVFPAYLCYDIERIKLRCSMYMWYREKVLEK 717 P VLN +++++E KI+ L LGYPLQS+ FP+YLCYDIERI LR SMY+W R+K K Sbjct: 466 PSVLNQTKYVIEKKIDCLRNCLGYPLQSVVAFPSYLCYDIERINLRFSMYVWLRDKGAAK 525 Query: 718 SRKALSTILATSDTKFVKHFVNVHPEGPAE 807 S +LSTILA SD +FVK+FV+VHPEGPA+ Sbjct: 526 SNLSLSTILACSDARFVKYFVDVHPEGPAQ 555 >ref|XP_002869971.1| hypothetical protein ARALYDRAFT_914700 [Arabidopsis lyrata subsp. lyrata] gi|297315807|gb|EFH46230.1| hypothetical protein ARALYDRAFT_914700 [Arabidopsis lyrata subsp. lyrata] Length = 550 Score = 263 bits (673), Expect = 3e-68 Identities = 135/268 (50%), Positives = 185/268 (69%) Frame = +1 Query: 1 KKVYVLISMLLKVGLKMNDIGTLFLEYPRILAGKFAENLLQAMQFMSEIGMEAEDISKLV 180 KK YVL L KVGL++N+I LF++ P +L+ K +N+ + + F+ I ME + I+K++ Sbjct: 273 KKFYVLFGRLFKVGLQVNEIYRLFIDNPEMLSDKCVKNIQKTLDFLIAIRMETQFITKIL 332 Query: 181 RSHTQVLGSSSLRKPVTVLSDLNVGPDRLSEMIMEDPTKFTSLASRWKPIVKKVAVEKGV 360 SH +++GS SL P T LNV D L +++ ++P + S S K K E Sbjct: 333 LSHMELIGSCSLPAPRTACLSLNVRQDELCQLLKKEPLRLFSFVSTTKKRKSKPLSEDSR 392 Query: 361 YDMEKTAFLLSIGYVENSEEMVKALKRFRGRGDQLQQRFDCLVKAGLDCHTVSNMVKAAP 540 +EKTAFLL +GYVENS+EMVKALK+FRGRGDQLQ+RFDCLVKAGL+ + V+ +++ AP Sbjct: 393 KYLEKTAFLLRLGYVENSDEMVKALKQFRGRGDQLQERFDCLVKAGLNHNVVTEIIRHAP 452 Query: 541 PVLNLSEHLLEMKIEYLVKDLGYPLQSLEVFPAYLCYDIERIKLRCSMYMWYREKVLEKS 720 +LNLS+ ++E KI L + LGYP++SL FPAYLCYD++RI R SMY+W RE+ K Sbjct: 453 MILNLSKDVIEKKIHSLTELLGYPIESLVRFPAYLCYDMQRIHHRFSMYLWLRERDAAKP 512 Query: 721 RKALSTILATSDTKFVKHFVNVHPEGPA 804 + STIL D +FVK+FVNVHPEGPA Sbjct: 513 MLSPSTILTCGDARFVKYFVNVHPEGPA 540 >ref|XP_002332130.1| predicted protein [Populus trichocarpa] gi|222875180|gb|EEF12311.1| predicted protein [Populus trichocarpa] Length = 577 Score = 261 bits (666), Expect = 2e-67 Identities = 135/269 (50%), Positives = 192/269 (71%), Gaps = 1/269 (0%) Frame = +1 Query: 1 KKVYVLISMLLKVGLKMNDIGTLFLEYPRILAGKFAENLLQAMQFMSEIGMEAEDISKLV 180 KKVY+L LLK+GLK+N+I +LF +YP+IL+ K A+NLL+ + + IGM EDI+ ++ Sbjct: 298 KKVYLLFGRLLKLGLKVNEIYSLFTQYPQILSAKRAKNLLRGIHILLGIGMGVEDIANII 357 Query: 181 RSHTQVLGSSSLRKPVTVLSDLNVGPDRLSEMIMEDPTKFTSLASRWKPIVKKVAVEKGV 360 + ++L S++L+ PVT+ D L +++ME+P + L S+ + K+ +G Sbjct: 358 STQMELLCSAALKGPVTLRRQFKDKKDSLCQILMENPLELFHLDSKSEVESSKMLSSQGP 417 Query: 361 YD-MEKTAFLLSIGYVENSEEMVKALKRFRGRGDQLQQRFDCLVKAGLDCHTVSNMVKAA 537 + +EKTAFLL +GYVENS+EM +ALK FRGRGDQLQ+RFDC V+AGLDC+ VS+ +K A Sbjct: 418 TNKLEKTAFLLRLGYVENSDEMARALKMFRGRGDQLQERFDCPVQAGLDCNVVSSFIKQA 477 Query: 538 PPVLNLSEHLLEMKIEYLVKDLGYPLQSLEVFPAYLCYDIERIKLRCSMYMWYREKVLEK 717 P VLN ++ ++E KI+ L +LG + SL FP+YLCYD+ERI LR MY W +EK K Sbjct: 478 PMVLNQTKDVIEKKIDCLT-NLGCSVNSLVAFPSYLCYDMERINLRFRMYTWLKEKGAAK 536 Query: 718 SRKALSTILATSDTKFVKHFVNVHPEGPA 804 + +LSTILA SD +F+K+FV+VHPEGPA Sbjct: 537 PKLSLSTILACSDARFIKYFVDVHPEGPA 565 >ref|NP_193700.2| Mitochondrial transcription termination factor family protein [Arabidopsis thaliana] gi|332658810|gb|AEE84210.1| Mitochondrial transcription termination factor family protein [Arabidopsis thaliana] Length = 575 Score = 258 bits (658), Expect = 1e-66 Identities = 132/268 (49%), Positives = 182/268 (67%) Frame = +1 Query: 1 KKVYVLISMLLKVGLKMNDIGTLFLEYPRILAGKFAENLLQAMQFMSEIGMEAEDISKLV 180 KK YVL L K GL++N+I LF++ P +L+ K +N+ + + F+ I ME + I+K++ Sbjct: 298 KKFYVLFGRLFKAGLQVNEIYRLFIDNPEMLSDKCVKNIQKTLDFLIAIRMETQFITKIL 357 Query: 181 RSHTQVLGSSSLRKPVTVLSDLNVGPDRLSEMIMEDPTKFTSLASRWKPIVKKVAVEKGV 360 SH +++GS SL P T LNV D L +++ ++P + S K K E Sbjct: 358 LSHMELIGSCSLPAPRTACLSLNVKQDELCKILKKEPLRLFCFVSTTKKRKSKPLSEDSR 417 Query: 361 YDMEKTAFLLSIGYVENSEEMVKALKRFRGRGDQLQQRFDCLVKAGLDCHTVSNMVKAAP 540 +EKT FLL +GYVENS+EMVKALK+FRGRGDQLQ+RFDCLVKAGL+ + V+ +++ AP Sbjct: 418 KYLEKTEFLLRLGYVENSDEMVKALKQFRGRGDQLQERFDCLVKAGLNYNVVTEIIRHAP 477 Query: 541 PVLNLSEHLLEMKIEYLVKDLGYPLQSLEVFPAYLCYDIERIKLRCSMYMWYREKVLEKS 720 +LNLS+ ++E KI L + LGYP++SL FPAYLCYD++RI R SMY+W RE+ K Sbjct: 478 MILNLSKDVIEKKIHSLTELLGYPIESLVRFPAYLCYDMQRIHHRFSMYLWLRERDAAKP 537 Query: 721 RKALSTILATSDTKFVKHFVNVHPEGPA 804 + STIL D +FVK+FVNVHPEGPA Sbjct: 538 MLSPSTILTCGDARFVKYFVNVHPEGPA 565 >dbj|BAF01901.1| hypothetical protein [Arabidopsis thaliana] Length = 346 Score = 258 bits (658), Expect = 1e-66 Identities = 132/268 (49%), Positives = 182/268 (67%) Frame = +1 Query: 1 KKVYVLISMLLKVGLKMNDIGTLFLEYPRILAGKFAENLLQAMQFMSEIGMEAEDISKLV 180 KK YVL L K GL++N+I LF++ P +L+ K +N+ + + F+ I ME + I+K++ Sbjct: 69 KKFYVLFGRLFKAGLQVNEIYRLFIDNPEMLSDKCVKNIQKTLDFLIAIRMETQFITKIL 128 Query: 181 RSHTQVLGSSSLRKPVTVLSDLNVGPDRLSEMIMEDPTKFTSLASRWKPIVKKVAVEKGV 360 SH +++GS SL P T LNV D L +++ ++P + S K K E Sbjct: 129 LSHMELIGSCSLPAPRTACLSLNVKQDELCKILKKEPLRLFCFVSTTKKRKSKPLSEDSR 188 Query: 361 YDMEKTAFLLSIGYVENSEEMVKALKRFRGRGDQLQQRFDCLVKAGLDCHTVSNMVKAAP 540 +EKT FLL +GYVENS+EMVKALK+FRGRGDQLQ+RFDCLVKAGL+ + V+ +++ AP Sbjct: 189 KYLEKTEFLLRLGYVENSDEMVKALKQFRGRGDQLQERFDCLVKAGLNYNVVTEIIRHAP 248 Query: 541 PVLNLSEHLLEMKIEYLVKDLGYPLQSLEVFPAYLCYDIERIKLRCSMYMWYREKVLEKS 720 +LNLS+ ++E KI L + LGYP++SL FPAYLCYD++RI R SMY+W RE+ K Sbjct: 249 MILNLSKDVIEKKIHSLTELLGYPIESLVRFPAYLCYDMQRIHHRFSMYLWLRERDAAKP 308 Query: 721 RKALSTILATSDTKFVKHFVNVHPEGPA 804 + STIL D +FVK+FVNVHPEGPA Sbjct: 309 MLSPSTILTCGDARFVKYFVNVHPEGPA 336