BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019124
         (809 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274185.2| PREDICTED: uncharacterized protein LOC100242...   300   2e-79
ref|XP_002869971.1| hypothetical protein ARALYDRAFT_914700 [Arab...   263   3e-68
ref|XP_002332130.1| predicted protein [Populus trichocarpa] gi|2...   261   2e-67
ref|NP_193700.2| Mitochondrial transcription termination factor ...   258   1e-66
dbj|BAF01901.1| hypothetical protein [Arabidopsis thaliana]           258   1e-66

>ref|XP_002274185.2| PREDICTED: uncharacterized protein LOC100242606 [Vitis vinifera]
          Length = 564

 Score =  300 bits (768), Expect = 2e-79
 Identities = 157/270 (58%), Positives = 201/270 (74%), Gaps = 1/270 (0%)
 Frame = +1

Query: 1    KKVYVLISMLLKVGLKMNDIGTLFLEYPRILAGKFAENLLQAMQFMSEIGMEAEDISKLV 180
            KK YVLI  LLK+G KM  + +LFL+ P+IL+ K  +NL QA+ F+ EIGM+ EDI  +V
Sbjct: 286  KKFYVLIGRLLKLGFKMKGVLSLFLQNPQILSKKCVKNLWQAVGFLFEIGMKVEDIVSIV 345

Query: 181  RSHTQVLGSSSLRKPVTVLSDLNVGPDRLSEMIMEDPTKFTSLASRWK-PIVKKVAVEKG 357
             SH Q+L S SL+ P TVL  L VG + L ++I EDP++  SLAS+ K   ++ V  +  
Sbjct: 346  SSHVQLLCSCSLKGPRTVLRSLKVGREGLCQIIKEDPSELLSLASKSKINSMEHVTCQSP 405

Query: 358  VYDMEKTAFLLSIGYVENSEEMVKALKRFRGRGDQLQQRFDCLVKAGLDCHTVSNMVKAA 537
               +EKT FLL +GYVENS+EM KALK FRGRGDQLQ+RFDCLV+AGLDC+ VSNM+K A
Sbjct: 406  SKHLEKTTFLLRLGYVENSDEMFKALKLFRGRGDQLQERFDCLVQAGLDCNVVSNMIKQA 465

Query: 538  PPVLNLSEHLLEMKIEYLVKDLGYPLQSLEVFPAYLCYDIERIKLRCSMYMWYREKVLEK 717
            P VLN +++++E KI+ L   LGYPLQS+  FP+YLCYDIERI LR SMY+W R+K   K
Sbjct: 466  PSVLNQTKYVIEKKIDCLRNCLGYPLQSVVAFPSYLCYDIERINLRFSMYVWLRDKGAAK 525

Query: 718  SRKALSTILATSDTKFVKHFVNVHPEGPAE 807
            S  +LSTILA SD +FVK+FV+VHPEGPA+
Sbjct: 526  SNLSLSTILACSDARFVKYFVDVHPEGPAQ 555


>ref|XP_002869971.1| hypothetical protein ARALYDRAFT_914700 [Arabidopsis lyrata subsp.
            lyrata] gi|297315807|gb|EFH46230.1| hypothetical protein
            ARALYDRAFT_914700 [Arabidopsis lyrata subsp. lyrata]
          Length = 550

 Score =  263 bits (673), Expect = 3e-68
 Identities = 135/268 (50%), Positives = 185/268 (69%)
 Frame = +1

Query: 1    KKVYVLISMLLKVGLKMNDIGTLFLEYPRILAGKFAENLLQAMQFMSEIGMEAEDISKLV 180
            KK YVL   L KVGL++N+I  LF++ P +L+ K  +N+ + + F+  I ME + I+K++
Sbjct: 273  KKFYVLFGRLFKVGLQVNEIYRLFIDNPEMLSDKCVKNIQKTLDFLIAIRMETQFITKIL 332

Query: 181  RSHTQVLGSSSLRKPVTVLSDLNVGPDRLSEMIMEDPTKFTSLASRWKPIVKKVAVEKGV 360
             SH +++GS SL  P T    LNV  D L +++ ++P +  S  S  K    K   E   
Sbjct: 333  LSHMELIGSCSLPAPRTACLSLNVRQDELCQLLKKEPLRLFSFVSTTKKRKSKPLSEDSR 392

Query: 361  YDMEKTAFLLSIGYVENSEEMVKALKRFRGRGDQLQQRFDCLVKAGLDCHTVSNMVKAAP 540
              +EKTAFLL +GYVENS+EMVKALK+FRGRGDQLQ+RFDCLVKAGL+ + V+ +++ AP
Sbjct: 393  KYLEKTAFLLRLGYVENSDEMVKALKQFRGRGDQLQERFDCLVKAGLNHNVVTEIIRHAP 452

Query: 541  PVLNLSEHLLEMKIEYLVKDLGYPLQSLEVFPAYLCYDIERIKLRCSMYMWYREKVLEKS 720
             +LNLS+ ++E KI  L + LGYP++SL  FPAYLCYD++RI  R SMY+W RE+   K 
Sbjct: 453  MILNLSKDVIEKKIHSLTELLGYPIESLVRFPAYLCYDMQRIHHRFSMYLWLRERDAAKP 512

Query: 721  RKALSTILATSDTKFVKHFVNVHPEGPA 804
              + STIL   D +FVK+FVNVHPEGPA
Sbjct: 513  MLSPSTILTCGDARFVKYFVNVHPEGPA 540


>ref|XP_002332130.1| predicted protein [Populus trichocarpa] gi|222875180|gb|EEF12311.1|
            predicted protein [Populus trichocarpa]
          Length = 577

 Score =  261 bits (666), Expect = 2e-67
 Identities = 135/269 (50%), Positives = 192/269 (71%), Gaps = 1/269 (0%)
 Frame = +1

Query: 1    KKVYVLISMLLKVGLKMNDIGTLFLEYPRILAGKFAENLLQAMQFMSEIGMEAEDISKLV 180
            KKVY+L   LLK+GLK+N+I +LF +YP+IL+ K A+NLL+ +  +  IGM  EDI+ ++
Sbjct: 298  KKVYLLFGRLLKLGLKVNEIYSLFTQYPQILSAKRAKNLLRGIHILLGIGMGVEDIANII 357

Query: 181  RSHTQVLGSSSLRKPVTVLSDLNVGPDRLSEMIMEDPTKFTSLASRWKPIVKKVAVEKGV 360
             +  ++L S++L+ PVT+        D L +++ME+P +   L S+ +    K+   +G 
Sbjct: 358  STQMELLCSAALKGPVTLRRQFKDKKDSLCQILMENPLELFHLDSKSEVESSKMLSSQGP 417

Query: 361  YD-MEKTAFLLSIGYVENSEEMVKALKRFRGRGDQLQQRFDCLVKAGLDCHTVSNMVKAA 537
             + +EKTAFLL +GYVENS+EM +ALK FRGRGDQLQ+RFDC V+AGLDC+ VS+ +K A
Sbjct: 418  TNKLEKTAFLLRLGYVENSDEMARALKMFRGRGDQLQERFDCPVQAGLDCNVVSSFIKQA 477

Query: 538  PPVLNLSEHLLEMKIEYLVKDLGYPLQSLEVFPAYLCYDIERIKLRCSMYMWYREKVLEK 717
            P VLN ++ ++E KI+ L  +LG  + SL  FP+YLCYD+ERI LR  MY W +EK   K
Sbjct: 478  PMVLNQTKDVIEKKIDCLT-NLGCSVNSLVAFPSYLCYDMERINLRFRMYTWLKEKGAAK 536

Query: 718  SRKALSTILATSDTKFVKHFVNVHPEGPA 804
             + +LSTILA SD +F+K+FV+VHPEGPA
Sbjct: 537  PKLSLSTILACSDARFIKYFVDVHPEGPA 565


>ref|NP_193700.2| Mitochondrial transcription termination factor family protein
            [Arabidopsis thaliana] gi|332658810|gb|AEE84210.1|
            Mitochondrial transcription termination factor family
            protein [Arabidopsis thaliana]
          Length = 575

 Score =  258 bits (658), Expect = 1e-66
 Identities = 132/268 (49%), Positives = 182/268 (67%)
 Frame = +1

Query: 1    KKVYVLISMLLKVGLKMNDIGTLFLEYPRILAGKFAENLLQAMQFMSEIGMEAEDISKLV 180
            KK YVL   L K GL++N+I  LF++ P +L+ K  +N+ + + F+  I ME + I+K++
Sbjct: 298  KKFYVLFGRLFKAGLQVNEIYRLFIDNPEMLSDKCVKNIQKTLDFLIAIRMETQFITKIL 357

Query: 181  RSHTQVLGSSSLRKPVTVLSDLNVGPDRLSEMIMEDPTKFTSLASRWKPIVKKVAVEKGV 360
             SH +++GS SL  P T    LNV  D L +++ ++P +     S  K    K   E   
Sbjct: 358  LSHMELIGSCSLPAPRTACLSLNVKQDELCKILKKEPLRLFCFVSTTKKRKSKPLSEDSR 417

Query: 361  YDMEKTAFLLSIGYVENSEEMVKALKRFRGRGDQLQQRFDCLVKAGLDCHTVSNMVKAAP 540
              +EKT FLL +GYVENS+EMVKALK+FRGRGDQLQ+RFDCLVKAGL+ + V+ +++ AP
Sbjct: 418  KYLEKTEFLLRLGYVENSDEMVKALKQFRGRGDQLQERFDCLVKAGLNYNVVTEIIRHAP 477

Query: 541  PVLNLSEHLLEMKIEYLVKDLGYPLQSLEVFPAYLCYDIERIKLRCSMYMWYREKVLEKS 720
             +LNLS+ ++E KI  L + LGYP++SL  FPAYLCYD++RI  R SMY+W RE+   K 
Sbjct: 478  MILNLSKDVIEKKIHSLTELLGYPIESLVRFPAYLCYDMQRIHHRFSMYLWLRERDAAKP 537

Query: 721  RKALSTILATSDTKFVKHFVNVHPEGPA 804
              + STIL   D +FVK+FVNVHPEGPA
Sbjct: 538  MLSPSTILTCGDARFVKYFVNVHPEGPA 565


>dbj|BAF01901.1| hypothetical protein [Arabidopsis thaliana]
          Length = 346

 Score =  258 bits (658), Expect = 1e-66
 Identities = 132/268 (49%), Positives = 182/268 (67%)
 Frame = +1

Query: 1   KKVYVLISMLLKVGLKMNDIGTLFLEYPRILAGKFAENLLQAMQFMSEIGMEAEDISKLV 180
           KK YVL   L K GL++N+I  LF++ P +L+ K  +N+ + + F+  I ME + I+K++
Sbjct: 69  KKFYVLFGRLFKAGLQVNEIYRLFIDNPEMLSDKCVKNIQKTLDFLIAIRMETQFITKIL 128

Query: 181 RSHTQVLGSSSLRKPVTVLSDLNVGPDRLSEMIMEDPTKFTSLASRWKPIVKKVAVEKGV 360
            SH +++GS SL  P T    LNV  D L +++ ++P +     S  K    K   E   
Sbjct: 129 LSHMELIGSCSLPAPRTACLSLNVKQDELCKILKKEPLRLFCFVSTTKKRKSKPLSEDSR 188

Query: 361 YDMEKTAFLLSIGYVENSEEMVKALKRFRGRGDQLQQRFDCLVKAGLDCHTVSNMVKAAP 540
             +EKT FLL +GYVENS+EMVKALK+FRGRGDQLQ+RFDCLVKAGL+ + V+ +++ AP
Sbjct: 189 KYLEKTEFLLRLGYVENSDEMVKALKQFRGRGDQLQERFDCLVKAGLNYNVVTEIIRHAP 248

Query: 541 PVLNLSEHLLEMKIEYLVKDLGYPLQSLEVFPAYLCYDIERIKLRCSMYMWYREKVLEKS 720
            +LNLS+ ++E KI  L + LGYP++SL  FPAYLCYD++RI  R SMY+W RE+   K 
Sbjct: 249 MILNLSKDVIEKKIHSLTELLGYPIESLVRFPAYLCYDMQRIHHRFSMYLWLRERDAAKP 308

Query: 721 RKALSTILATSDTKFVKHFVNVHPEGPA 804
             + STIL   D +FVK+FVNVHPEGPA
Sbjct: 309 MLSPSTILTCGDARFVKYFVNVHPEGPA 336