BLASTX nr result
ID: Coptis24_contig00019117
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00019117 (577 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003635065.1| PREDICTED: uncharacterized protein LOC100233... 69 7e-10 ref|XP_002304995.1| predicted protein [Populus trichocarpa] gi|2... 67 2e-09 gb|AFK42939.1| unknown [Medicago truncatula] 63 4e-08 ref|XP_002524694.1| conserved hypothetical protein [Ricinus comm... 59 8e-07 >ref|XP_003635065.1| PREDICTED: uncharacterized protein LOC100233117 [Vitis vinifera] Length = 89 Score = 68.6 bits (166), Expect = 7e-10 Identities = 39/93 (41%), Positives = 53/93 (56%) Frame = +1 Query: 178 ISLR*TNRVLYEHNMKVMKGIKEQAVTKCEASVNKYSIKETSHSRSNELRRFCSVXXXXX 357 +SLR RV+Y+ M+VM G+K+QA +KC+ ++ S S S + RRF Sbjct: 1 MSLRCLGRVVYQAGMRVMLGMKDQA-SKCDPTLKSLRDSGCSSSSSTQARRFSGALDSAA 59 Query: 358 XXXXXXXXXGDEKLKHAEESLRMVMYLSCWGPN 456 +E+LK +EESLR VMYLSCWGPN Sbjct: 60 FKAVKN---AEERLKQSEESLRTVMYLSCWGPN 89 >ref|XP_002304995.1| predicted protein [Populus trichocarpa] gi|222847959|gb|EEE85506.1| predicted protein [Populus trichocarpa] Length = 87 Score = 67.0 bits (162), Expect = 2e-09 Identities = 39/93 (41%), Positives = 54/93 (58%) Frame = +1 Query: 178 ISLR*TNRVLYEHNMKVMKGIKEQAVTKCEASVNKYSIKETSHSRSNELRRFCSVXXXXX 357 +SLR +RVLY+ ++V++G+K+QA +KC++S K S S + RRF Sbjct: 1 MSLRYASRVLYQSGVRVVQGMKDQA-SKCDSSAIKSLRDSACSSSSKQARRFSGSVDSSA 59 Query: 358 XXXXXXXXXGDEKLKHAEESLRMVMYLSCWGPN 456 +EK K AEESLR VM+LSCWGPN Sbjct: 60 YMNAK-----NEKFKQAEESLRTVMFLSCWGPN 87 >gb|AFK42939.1| unknown [Medicago truncatula] Length = 89 Score = 62.8 bits (151), Expect = 4e-08 Identities = 36/93 (38%), Positives = 57/93 (61%) Frame = +1 Query: 178 ISLR*TNRVLYEHNMKVMKGIKEQAVTKCEASVNKYSIKETSHSRSNELRRFCSVXXXXX 357 +SLR RVLY+ M+ +G+K+Q+ +KC++++ S+++++ S+ + R F + Sbjct: 1 MSLRYIGRVLYQTAMRTFQGMKDQS-SKCDSTIK--SLRDSTSSKQVKARVFSNNTAFEN 57 Query: 358 XXXXXXXXXGDEKLKHAEESLRMVMYLSCWGPN 456 D K+K AEESLR VMYLSCWGPN Sbjct: 58 SSSAFKGSNSD-KVKRAEESLRTVMYLSCWGPN 89 >ref|XP_002524694.1| conserved hypothetical protein [Ricinus communis] gi|223536055|gb|EEF37713.1| conserved hypothetical protein [Ricinus communis] Length = 82 Score = 58.5 bits (140), Expect = 8e-07 Identities = 37/93 (39%), Positives = 51/93 (54%) Frame = +1 Query: 178 ISLR*TNRVLYEHNMKVMKGIKEQAVTKCEASVNKYSIKETSHSRSNELRRFCSVXXXXX 357 +SLR +RV+Y+ M+ ++G+K++A S+ E++ S S + RRF Sbjct: 1 MSLRYASRVMYQAGMRALQGMKDKA---------SKSLTESAAS-SKQARRFSGATAVDS 50 Query: 358 XXXXXXXXXGDEKLKHAEESLRMVMYLSCWGPN 456 D KLK AEESLR VMYLSCWGPN Sbjct: 51 DALSKSAAKND-KLKKAEESLRTVMYLSCWGPN 82