BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019111
         (1392 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320506.1| f-box family protein [Populus trichocarpa] g...   177   6e-42
ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vi...   176   1e-41
ref|XP_002301588.1| f-box family protein [Populus trichocarpa] g...   172   2e-40
ref|XP_002517454.1| conserved hypothetical protein [Ricinus comm...   166   2e-38
ref|XP_002882554.1| F-box family protein [Arabidopsis lyrata sub...   164   5e-38

>ref|XP_002320506.1| f-box family protein [Populus trichocarpa]
            gi|222861279|gb|EEE98821.1| f-box family protein [Populus
            trichocarpa]
          Length = 422

 Score =  177 bits (449), Expect = 6e-42
 Identities = 133/393 (33%), Positives = 190/393 (48%), Gaps = 46/393 (11%)
 Frame = +3

Query: 180  MEKLPTETISDILLRLPFDSLSESRYVCKSWSNNITYDPYFVHKYIQQLQTQNKDLGFIF 359
            ME LP E   DIL RLP  SL + + VC++W   +  DP  V  Y+    TQ+ D   + 
Sbjct: 25   MELLPREIAHDILSRLPITSLVQFKCVCRAW-RALVQDPQLVDLYLS-CSTQDTDHPCLI 82

Query: 360  LMKNF----ELCYVEY--NDAKVYKLTKISGCPIKFTCTQRAIVGSCNGLMCISNDISNN 521
            L  +F     L +V++  ++ +  K+ +I   P      +  +VGSCNGL+C+S+ + N+
Sbjct: 83   LHCDFPIRNNLYFVDFAAHEEEKEKVKRIPA-PFSSMMPEFEVVGSCNGLLCLSDSLYND 141

Query: 522  PSYVCNPFTRECIKLPKISDSEHDLDPRPPMVRGFGYDGSSNQYKAVRILF--------- 674
              Y+ NPFT    +LPK         P   +V GFG++  + +YK +RI++         
Sbjct: 142  SLYIYNPFTGCYKELPKSLQY-----PDQEVVSGFGFNPKTKEYKVIRIVYYRNGHGGYP 196

Query: 675  RDKLNQWP---VHVYTLGKDTEWRSKGNAPFFLRWYNSSGVVVNGALHWLTEPNGVGSYV 845
            R +   +P   V + TLG   EWRS G   + L    +SG +VNG LHW++ P       
Sbjct: 197  RSRRIIYPLSEVQILTLGCP-EWRSLGKVSYRLV-RRASGALVNGRLHWISRP----CRN 250

Query: 846  DYCCRIVAFDLASEEFRVVPSPSCVTPCKVNYELVQLGGCLCVNHYCSNGSLEIWMMKE- 1022
                R+V+FDL  E+FR V  P C    + NY LV L GCL    YC+ G LEIW+MKE 
Sbjct: 251  KPARRLVSFDLTDEQFREVSKPDCGGLNRCNYHLVVLRGCLSAAVYCNYGRLEIWVMKEY 310

Query: 1023 --NSYWTKEHTIECGGGYKP-------------------------LALTKDGEVLLWRSG 1121
                 W KE+ I   G Y P                         L + K+GE+LL    
Sbjct: 311  NVKESWVKEYNI---GAYMPKGLKQNQDRQLKIWKNSSNGRVVGALCVLKNGEILLEYKN 367

Query: 1122 VVLLSYDPNTGSLKVIKDHGNISRLEAVAHMKS 1220
             VL+SYDP  G  K I+  G  +  + V H+ S
Sbjct: 368  RVLVSYDPKNGKFKDIELQGAPNWFQTVVHVGS 400


>ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vinifera]
            gi|147785390|emb|CAN68678.1| hypothetical protein
            VITISV_041941 [Vitis vinifera]
          Length = 409

 Score =  176 bits (446), Expect = 1e-41
 Identities = 130/389 (33%), Positives = 190/389 (48%), Gaps = 42/389 (10%)
 Frame = +3

Query: 180  MEKLPTETISDILLRLPFDSLSESRYVCKSWSNNITYDPYFVHKYIQQLQTQNKDLGFI- 356
            ME+LP + I DIL RLP  SL + R+VC+ W   +  D     K++ +    N  L    
Sbjct: 27   MERLPRDIILDILSRLPVTSLVQFRFVCRGW-RLMAQDSLLASKHLCRTAQYNPCLILHC 85

Query: 357  -FLMKNFELCYVEYN-DAKVYKLTKISGCPIKFTCTQRAIVGSCNGLMCISNDISNNPSY 530
             + ++N ++ +V+ + +++   + +    P   +  +  +VGSCNGL+C+++ +  +  Y
Sbjct: 86   DYPIRN-QISFVDISAESRDKDMVRKLTIPFWASMPEFEVVGSCNGLLCLADSLFKDAVY 144

Query: 531  VCNPFTRECIKLPKISDSEHDLDPRPPMVRGFGYDGSSNQYKAVRILF------------ 674
            V NPFTR+  +LPK         P   +V GFGY   +  YK V++++            
Sbjct: 145  VHNPFTRDFKQLPKSLQY-----PDQEVVFGFGYHPMTEVYKVVKVVYYRNGYGGFSRFR 199

Query: 675  RDKLNQWPVHVYTLGKDTEWRSKGNAPFFL-RWYNSSGVVVNGALHWLTEPNGVGSYVDY 851
            R   +Q  V V TLG  T WRS G   + L RW   S  +VNG LHW+T P        Y
Sbjct: 200  RITCSQSEVQVLTLGSPT-WRSLGKVSYQLDRW--PSEALVNGRLHWVTRPRR------Y 250

Query: 852  CCR-IVAFDLASEEFRVVPSPSCVTPCKVNYELVQLGGCLCVNHYCSNGSLEIWMMKE-- 1022
              R IV+FDLA E+FR +P P C    + NY L+ LGGCL    + SNG LE+W+MKE  
Sbjct: 251  VTRFIVSFDLADEQFREIPKPDCGGLSRCNYHLLVLGGCLSAAVHRSNGKLEVWVMKEYD 310

Query: 1023 -NSYWTKEHTIEC----------------------GGGYKPLALTKDGEVLLWRSGVVLL 1133
                W KE  I                        G G + L L K+GE+LL   G VL+
Sbjct: 311  VKESWIKEFNIGAHLPKGLKQDVNRPHRIWRNAPKGRGVRLLCLLKNGEILLEYKGRVLV 370

Query: 1134 SYDPNTGSLKVIKDHGNISRLEAVAHMKS 1220
            SY+P  G  K +   G  +  +   H+ S
Sbjct: 371  SYNPERGKFKDLTLKGLPNWFQTFVHVGS 399


>ref|XP_002301588.1| f-box family protein [Populus trichocarpa]
            gi|222843314|gb|EEE80861.1| f-box family protein [Populus
            trichocarpa]
          Length = 408

 Score =  172 bits (435), Expect = 2e-40
 Identities = 130/390 (33%), Positives = 188/390 (48%), Gaps = 43/390 (11%)
 Frame = +3

Query: 180  MEKLPTETISDILLRLPFDSLSESRYVCKSWSNNITYDPYFVHKYIQQLQTQNKDLGFI- 356
            ME LP E   DIL RLP  SL + + VC++W   +  DP  V+ Y+    TQ  D   I 
Sbjct: 25   MELLPREIAQDILSRLPITSLVKFKCVCRAW-RAMALDPEVVNLYLS-CSTQETDPCVIL 82

Query: 357  ---FLMKNFELCYVEY--NDAKVYKLTKISGCPIKFTCTQRAIVGSCNGLMCISNDISNN 521
               F ++N  L +V++  ++ +  K+ +I   P      +  +VGSCNGL+C+S+ + N+
Sbjct: 83   HCDFPIRN-NLYFVDFAAHEEEKEKVKRIRA-PFSSMMPEFEVVGSCNGLLCLSDSLFND 140

Query: 522  PSYVCNPFTRECIKLPKISDSEHDLDPRPPMVRGFGYDGSSNQYKAVRILF-RDKLNQWP 698
              Y+ NPFT    +LPK         P   +V GFG++  +N+YK +RI++ R+   ++P
Sbjct: 141  SLYIYNPFTGRYKELPKSLQY-----PDQEVVFGFGFNPKTNEYKVIRIVYYRNGHGRYP 195

Query: 699  -----------VHVYTLGKDTEWRSKGNAPFFLRWYNSSGVVVNGALHWLTEPNGVGSYV 845
                       V + TLG    WRS G   + L    +S  +VNG LHW++ P       
Sbjct: 196  RSRRIIYPLSQVQILTLGCPG-WRSLGKVSYRLV-RRASETLVNGRLHWVSRP----CRN 249

Query: 846  DYCCRIVAFDLASEEFRVVPSPSCVTPCKVNYELVQLGGCLCVNHYCSNGSLEIWMMKE- 1022
                R+V+FDL  E+FR VP P C    + +Y L  L GCL V  YC+ G LEIW+MKE 
Sbjct: 250  KPARRLVSFDLTDEQFREVPKPDCGGLNRCDYHLAVLRGCLSVAVYCNYGRLEIWVMKEY 309

Query: 1023 --NSYWTKEHTIEC----------------------GGGYKPLALTKDGEVLLWRSGVVL 1130
                 W KE+ I                        G   + L + K+GE+LL      L
Sbjct: 310  NVKESWVKEYNIGAYMPKGLKQNLVRPLKIWKNASNGRAVRALCVLKNGEILLEYKNRAL 369

Query: 1131 LSYDPNTGSLKVIKDHGNISRLEAVAHMKS 1220
            +SYDP  G  K I   G     + V H+ S
Sbjct: 370  VSYDPKKGKFKDIDLQGTPKWFQTVVHVGS 399


>ref|XP_002517454.1| conserved hypothetical protein [Ricinus communis]
            gi|223543465|gb|EEF44996.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 401

 Score =  166 bits (419), Expect = 2e-38
 Identities = 125/390 (32%), Positives = 183/390 (46%), Gaps = 32/390 (8%)
 Frame = +3

Query: 183  EKLPTETISDILLRLPFDSLSESRYVCKSWSNNITYDPYFVHKYIQQLQTQNKDLGFI-- 356
            EKLP E   DIL R P  SL E + V + W  ++  +P   + ++ +   QN  L F   
Sbjct: 20   EKLPQEIYFDILSRQPIVSLLECKPVSRHWYTSVR-NPLLANMHLNRAAEQNLCLLFFSD 78

Query: 357  FLMKNFELCYVEYNDAKVYKLTKISGCPIKFTCTQRAIVGSCNGLMCISNDISNNPSYVC 536
            +     EL  VE+ + +  K  K    P +   ++  +VGSCNGL+C+ +  S++P Y+ 
Sbjct: 79   WPRSKLELVQVEHPEPRKLKTLKT---PFESVLSEFEVVGSCNGLICLYDYFSDDPLYIY 135

Query: 537  NPFTRECIKLPKISDSEHDLDPRPPMVRGFGYDGSSNQYKAVRILFRDKLNQ-----WPV 701
            NPFT EC +LP++  S H +  R  +V GFG+     +YK ++I++  + N       P 
Sbjct: 136  NPFTIECRELPRVEASPHSVICR--VVFGFGFHPKMEEYKVIKIVYYKQGNNDFSGGAPE 193

Query: 702  HVYTLGKDTEWRSKGNAPFFLRWYNSSGVVVNGALHWLTEPNGVGSYVDYCCRIVAFDLA 881
                      WR+ G   + L    S  +V N  LHWLT    V   V Y   IV+FDL 
Sbjct: 194  AFVLTANTPTWRNIGKIGYDLNGPTSEALV-NEKLHWLTFCL-VHEEVKYR-EIVSFDLE 250

Query: 882  SEEFRVVPSPSCVTPCKVNYELVQLGGCLCVNHYCSNGSLEIWMMK---ENSYWTKEHTI 1052
            +E+F+ VP P C    ++NY LV L GCL     C+ GS EIWMMK     + W KE  +
Sbjct: 251  TEQFQDVPRPGCGGLDQINYHLVTLRGCLSAIVSCNEGSNEIWMMKIYNVKASWRKEMIV 310

Query: 1053 E----------------------CGGGYKPLALTKDGEVLLWRSGVVLLSYDPNTGSLKV 1166
                                    G  ++ L   K+GE+LL      ++SY+P TG  K 
Sbjct: 311  RNYVPQGLRLNTVPPARRRKNGYQGRRFRVLCDLKNGELLLLYGCRCIVSYNPETGEFKE 370

Query: 1167 IKDHGNISRLEAVAHMKSCVSLNAICGNPM 1256
            +   G      A  H  S +S+N + G  M
Sbjct: 371  LNFQGLPLEFLAFVHSGSLISVNTVFGMEM 400


>ref|XP_002882554.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
            gi|297328394|gb|EFH58813.1| F-box family protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 415

 Score =  164 bits (415), Expect = 5e-38
 Identities = 118/396 (29%), Positives = 187/396 (47%), Gaps = 49/396 (12%)
 Frame = +3

Query: 174  GEMEKLPTETISDILLRLPFDSLSESRYVCKSWSNNITYDPYFVHKYIQQLQTQNKDLGF 353
            G +E LP + I+DI  RLP  S++   +VC+SW + +T      H  +    +  K    
Sbjct: 22   GGLESLPGDIIADIFSRLPISSIARLMFVCRSWRSILTQ-----HGRVSSSSSPTKPCLL 76

Query: 354  IFLMKNFE--LCYVEYNDAKVYKLTKISGCPIKFTCTQRAIVGSCNGLMCISNDISNNPS 527
            +         L +++ ++ +    TK      + +  +  +VGSCNGL+C+S+ + N+  
Sbjct: 77   LHCDSPIRNGLHFLDLSEEEKRIKTKKFTLRFESSMPEFDVVGSCNGLLCLSDSLYNDSL 136

Query: 528  YVCNPFTRECIKLPKISDSEHDLDPRPPMVRGFGYDGSSNQYKAVRILF----------- 674
            Y+ NPFT   ++LP+ S+  HD +    +V GFG+   +  YK ++I++           
Sbjct: 137  YLYNPFTTNSLELPECSNKYHDQE----LVFGFGFHEMTKDYKVLKIVYFRGSSSSNNGI 192

Query: 675  -----RDKLNQWPVHVYTLGKDT-----EWRSKGNAPF-FLRWYNSSGVVVNGALHWLTE 821
                 R +  Q  V + TL   T      WRS G AP+ F++   SS  +VNG LH++T 
Sbjct: 193  YRGRGRIQYKQSEVQILTLSSKTTDQSLSWRSLGKAPYKFMK--RSSEALVNGRLHFVTR 250

Query: 822  PNGVGSYVDYCCRIVAFDLASEEFRVVPSPSCVTPCKVNYELVQLGGCLCVNHYCSNGSL 1001
            P       D   + V+FDL  EEF+ +P P C    + N+ LV L GCLC   Y + G L
Sbjct: 251  PRR--HVPDR--KFVSFDLEDEEFKEIPKPDCGGLNRTNHRLVNLKGCLCAVVYGNYGKL 306

Query: 1002 EIWMMKE---NSYWTKEHTI----------------------ECGGGYKPLALTKDGEVL 1106
            +IW+M+       W KE++I                      E G   + L L ++GE+L
Sbjct: 307  DIWVMETYGVKESWGKEYSIGTYLPKGLKQNLDRPMWIWKNAENGKVVRVLCLLENGEIL 366

Query: 1107 LWRSGVVLLSYDPNTGSLKVIKDHGNISRLEAVAHM 1214
            L     VL++YDP  G  K +  HG  +    V H+
Sbjct: 367  LEYKSRVLVAYDPKLGKFKDLLFHGLPNWFHTVVHV 402