BLASTX nr result

ID: Coptis24_contig00019101 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019101
         (364 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P37384.1|DMC1_LILLO RecName: Full=Meiotic recombination prote...    63   3e-08
ref|XP_002279369.2| PREDICTED: LOW QUALITY PROTEIN: meiotic reco...    63   3e-08
ref|XP_003578935.1| PREDICTED: meiotic recombination protein DMC...    63   3e-08
emb|CBX24444.1| hypothetical_protein [Oryza glaberrima]                63   3e-08
emb|CBI26317.3| unnamed protein product [Vitis vinifera]               63   3e-08

>sp|P37384.1|DMC1_LILLO RecName: Full=Meiotic recombination protein DMC1 homolog
           gi|431168|dbj|BAA04845.1| RAD51-like protein [Lilium
           longiflorum]
          Length = 349

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 29/31 (93%), Positives = 30/31 (96%)
 Frame = +2

Query: 272 VISQGINAGDVKKLQDAGIYTCNGLMMQTKK 364
           +ISQGINAGDVKKLQDAGIYTCNGLMM TKK
Sbjct: 39  LISQGINAGDVKKLQDAGIYTCNGLMMHTKK 69


>ref|XP_002279369.2| PREDICTED: LOW QUALITY PROTEIN: meiotic recombination protein DMC1
           homolog [Vitis vinifera]
          Length = 361

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 29/31 (93%), Positives = 30/31 (96%)
 Frame = +2

Query: 272 VISQGINAGDVKKLQDAGIYTCNGLMMQTKK 364
           +ISQGINAGDVKKLQDAGIYTCNGLMM TKK
Sbjct: 34  LISQGINAGDVKKLQDAGIYTCNGLMMHTKK 64


>ref|XP_003578935.1| PREDICTED: meiotic recombination protein DMC1 homolog [Brachypodium
           distachyon]
          Length = 345

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 29/31 (93%), Positives = 30/31 (96%)
 Frame = +2

Query: 272 VISQGINAGDVKKLQDAGIYTCNGLMMQTKK 364
           +ISQGINAGDVKKLQDAGIYTCNGLMM TKK
Sbjct: 35  LISQGINAGDVKKLQDAGIYTCNGLMMHTKK 65


>emb|CBX24444.1| hypothetical_protein [Oryza glaberrima]
          Length = 305

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 29/31 (93%), Positives = 30/31 (96%)
 Frame = +2

Query: 272 VISQGINAGDVKKLQDAGIYTCNGLMMQTKK 364
           VISQGIN+GDVKKLQDAGIYTCNGLMM TKK
Sbjct: 34  VISQGINSGDVKKLQDAGIYTCNGLMMHTKK 64


>emb|CBI26317.3| unnamed protein product [Vitis vinifera]
          Length = 348

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 29/31 (93%), Positives = 30/31 (96%)
 Frame = +2

Query: 272 VISQGINAGDVKKLQDAGIYTCNGLMMQTKK 364
           +ISQGINAGDVKKLQDAGIYTCNGLMM TKK
Sbjct: 34  LISQGINAGDVKKLQDAGIYTCNGLMMHTKK 64


Top