BLASTX nr result

ID: Coptis24_contig00019093 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019093
         (394 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285444.1| PREDICTED: eukaryotic translation initiation...   139   2e-31
emb|CBI23707.3| unnamed protein product [Vitis vinifera]              139   2e-31
ref|XP_002528368.1| eukaryotic translation initiation factor 4e,...   138   5e-31
gb|AAU06579.1| eukaryotic initiation factor iso4E [Nicotiana tab...   137   1e-30
emb|CBL94695.1| eukaryotic translation initiation factor, partia...   136   2e-30

>ref|XP_002285444.1| PREDICTED: eukaryotic translation initiation factor 4E-2-like
           [Vitis vinifera]
          Length = 204

 Score =  139 bits (350), Expect = 2e-31
 Identities = 66/103 (64%), Positives = 74/103 (71%)
 Frame = +2

Query: 86  KVPHQLARRWTFWFDNXXXXXXXXXXXXXXXXXTFWFDNQSKQTKQGAAWGSSLRKIYTF 265
           K PH+L R+WTFWF                       DNQSK  KQGAAWG+SLRK YTF
Sbjct: 26  KQPHRLERKWTFWF-----------------------DNQSKP-KQGAAWGTSLRKAYTF 61

Query: 266 DTVEDFWCLYDQIFRPSKLVANADFHMFKAGIEPKWEDPECAN 394
           +TVE+FWCLYDQIF+PSKL ANADFH+FKAG+EPKWEDPECAN
Sbjct: 62  ETVEEFWCLYDQIFKPSKLPANADFHLFKAGVEPKWEDPECAN 104


>emb|CBI23707.3| unnamed protein product [Vitis vinifera]
          Length = 190

 Score =  139 bits (350), Expect = 2e-31
 Identities = 66/103 (64%), Positives = 74/103 (71%)
 Frame = +2

Query: 86  KVPHQLARRWTFWFDNXXXXXXXXXXXXXXXXXTFWFDNQSKQTKQGAAWGSSLRKIYTF 265
           K PH+L R+WTFWF                       DNQSK  KQGAAWG+SLRK YTF
Sbjct: 12  KQPHRLERKWTFWF-----------------------DNQSKP-KQGAAWGTSLRKAYTF 47

Query: 266 DTVEDFWCLYDQIFRPSKLVANADFHMFKAGIEPKWEDPECAN 394
           +TVE+FWCLYDQIF+PSKL ANADFH+FKAG+EPKWEDPECAN
Sbjct: 48  ETVEEFWCLYDQIFKPSKLPANADFHLFKAGVEPKWEDPECAN 90


>ref|XP_002528368.1| eukaryotic translation initiation factor 4e, putative [Ricinus
           communis] gi|223532236|gb|EEF34040.1| eukaryotic
           translation initiation factor 4e, putative [Ricinus
           communis]
          Length = 201

 Score =  138 bits (347), Expect = 5e-31
 Identities = 60/70 (85%), Positives = 67/70 (95%)
 Frame = +2

Query: 185 TFWFDNQSKQTKQGAAWGSSLRKIYTFDTVEDFWCLYDQIFRPSKLVANADFHMFKAGIE 364
           TFWFDNQSK  KQGAAWG+SLRK+YTFDTVE+FWCLYDQIF+PSKL A+ADFH+FKAG+E
Sbjct: 33  TFWFDNQSKP-KQGAAWGTSLRKVYTFDTVEEFWCLYDQIFKPSKLPASADFHLFKAGVE 91

Query: 365 PKWEDPECAN 394
           PKWEDPECAN
Sbjct: 92  PKWEDPECAN 101


>gb|AAU06579.1| eukaryotic initiation factor iso4E [Nicotiana tabacum]
          Length = 200

 Score =  137 bits (344), Expect = 1e-30
 Identities = 67/103 (65%), Positives = 73/103 (70%)
 Frame = +2

Query: 86  KVPHQLARRWTFWFDNXXXXXXXXXXXXXXXXXTFWFDNQSKQTKQGAAWGSSLRKIYTF 265
           K PH+L RRWTFWF                       DNQSK  KQGAAWGSSLRK YTF
Sbjct: 23  KQPHKLERRWTFWF-----------------------DNQSKP-KQGAAWGSSLRKAYTF 58

Query: 266 DTVEDFWCLYDQIFRPSKLVANADFHMFKAGIEPKWEDPECAN 394
           +TVE+FW LYDQIF+PSKL ANADFH+FKAGIEPKWEDPECA+
Sbjct: 59  ETVEEFWSLYDQIFKPSKLTANADFHLFKAGIEPKWEDPECAS 101


>emb|CBL94695.1| eukaryotic translation initiation factor, partial [Capsicum
           pubescens] gi|385653735|emb|CBL94696.1| eukaryotic
           translation initiation factor, partial [Capsicum
           pubescens]
          Length = 198

 Score =  136 bits (343), Expect = 2e-30
 Identities = 66/103 (64%), Positives = 72/103 (69%)
 Frame = +2

Query: 86  KVPHQLARRWTFWFDNXXXXXXXXXXXXXXXXXTFWFDNQSKQTKQGAAWGSSLRKIYTF 265
           K PH+L R+WTFWF                       DNQSK  KQGAAWGSSL+K YTF
Sbjct: 21  KQPHKLERKWTFWF-----------------------DNQSKP-KQGAAWGSSLKKAYTF 56

Query: 266 DTVEDFWCLYDQIFRPSKLVANADFHMFKAGIEPKWEDPECAN 394
           DTVE+FW LYDQIF+PSKL  NADFH+FKAGIEPKWEDPECAN
Sbjct: 57  DTVEEFWSLYDQIFKPSKLTVNADFHLFKAGIEPKWEDPECAN 99


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