BLASTX nr result

ID: Coptis24_contig00019091 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019091
         (267 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279065.2| PREDICTED: uncharacterized protein LOC100249...   119   3e-25
emb|CBI17648.3| unnamed protein product [Vitis vinifera]              119   3e-25
ref|XP_002512625.1| conserved hypothetical protein [Ricinus comm...   116   2e-24
ref|XP_002886836.1| hypothetical protein ARALYDRAFT_475541 [Arab...   116   2e-24
ref|NP_564848.1| uncharacterized protein [Arabidopsis thaliana] ...   116   2e-24

>ref|XP_002279065.2| PREDICTED: uncharacterized protein LOC100249671 [Vitis vinifera]
          Length = 122

 Score =  119 bits (297), Expect = 3e-25
 Identities = 50/61 (81%), Positives = 53/61 (86%)
 Frame = -3

Query: 244 VLNDTRRRLGRFHICALCTSCRGPRGLCLPSP*CYDINCNIPNRPFGVCSFTPKTCNCFG 65
           VLN++RRRLG F ICALCT C G +GLCLPSP CY INCNIPNRPFG CSFTPKTCNCFG
Sbjct: 60  VLNESRRRLGSFQICALCTCCGGAKGLCLPSPCCYAINCNIPNRPFGFCSFTPKTCNCFG 119

Query: 64  C 62
           C
Sbjct: 120 C 120


>emb|CBI17648.3| unnamed protein product [Vitis vinifera]
          Length = 120

 Score =  119 bits (297), Expect = 3e-25
 Identities = 50/61 (81%), Positives = 53/61 (86%)
 Frame = -3

Query: 244 VLNDTRRRLGRFHICALCTSCRGPRGLCLPSP*CYDINCNIPNRPFGVCSFTPKTCNCFG 65
           VLN++RRRLG F ICALCT C G +GLCLPSP CY INCNIPNRPFG CSFTPKTCNCFG
Sbjct: 58  VLNESRRRLGSFQICALCTCCGGAKGLCLPSPCCYAINCNIPNRPFGFCSFTPKTCNCFG 117

Query: 64  C 62
           C
Sbjct: 118 C 118


>ref|XP_002512625.1| conserved hypothetical protein [Ricinus communis]
           gi|223548586|gb|EEF50077.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 119

 Score =  116 bits (291), Expect = 2e-24
 Identities = 48/61 (78%), Positives = 53/61 (86%)
 Frame = -3

Query: 244 VLNDTRRRLGRFHICALCTSCRGPRGLCLPSP*CYDINCNIPNRPFGVCSFTPKTCNCFG 65
           ++N++RRRLG F ICALCT C G +GLCLPSP CY INCNIPNRPFG CSFTPKTCNCFG
Sbjct: 57  MVNESRRRLGSFQICALCTCCGGAKGLCLPSPCCYAINCNIPNRPFGFCSFTPKTCNCFG 116

Query: 64  C 62
           C
Sbjct: 117 C 117


>ref|XP_002886836.1| hypothetical protein ARALYDRAFT_475541 [Arabidopsis lyrata subsp.
           lyrata] gi|297332677|gb|EFH63095.1| hypothetical protein
           ARALYDRAFT_475541 [Arabidopsis lyrata subsp. lyrata]
          Length = 113

 Score =  116 bits (290), Expect = 2e-24
 Identities = 47/61 (77%), Positives = 53/61 (86%)
 Frame = -3

Query: 244 VLNDTRRRLGRFHICALCTSCRGPRGLCLPSP*CYDINCNIPNRPFGVCSFTPKTCNCFG 65
           V+N+TRR+LG F IC++CT C G +GLCLPSP CY INCNIPNRPFG CSFTPKTCNCFG
Sbjct: 51  VMNETRRKLGSFQICSVCTCCGGAKGLCLPSPCCYAINCNIPNRPFGYCSFTPKTCNCFG 110

Query: 64  C 62
           C
Sbjct: 111 C 111


>ref|NP_564848.1| uncharacterized protein [Arabidopsis thaliana]
           gi|24030191|gb|AAN41276.1| unknown protein [Arabidopsis
           thaliana] gi|332196234|gb|AEE34355.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 115

 Score =  116 bits (290), Expect = 2e-24
 Identities = 47/61 (77%), Positives = 53/61 (86%)
 Frame = -3

Query: 244 VLNDTRRRLGRFHICALCTSCRGPRGLCLPSP*CYDINCNIPNRPFGVCSFTPKTCNCFG 65
           V+N+TRR+LG F IC++CT C G +GLCLPSP CY INCNIPNRPFG CSFTPKTCNCFG
Sbjct: 53  VMNETRRKLGSFQICSVCTCCGGAKGLCLPSPCCYAINCNIPNRPFGYCSFTPKTCNCFG 112

Query: 64  C 62
           C
Sbjct: 113 C 113


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