BLASTX nr result

ID: Coptis24_contig00019089 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019089
         (870 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003594624.1| Solute carrier family 25 member [Medicago tr...   375   e-102
ref|XP_002274536.1| PREDICTED: solute carrier family 25 member 4...   365   7e-99
ref|XP_004147664.1| PREDICTED: solute carrier family 25 member 4...   361   1e-97
ref|XP_002312303.1| predicted protein [Populus trichocarpa] gi|2...   353   2e-95
ref|XP_003534799.1| PREDICTED: solute carrier family 25 member 4...   343   4e-92

>ref|XP_003594624.1| Solute carrier family 25 member [Medicago truncatula]
           gi|355483672|gb|AES64875.1| Solute carrier family 25
           member [Medicago truncatula]
          Length = 323

 Score =  375 bits (963), Expect = e-102
 Identities = 177/240 (73%), Positives = 209/240 (87%)
 Frame = -2

Query: 728 VDAADSATPSFALSETDINWHRLDKTRFHVFGAVLFTAQLTILHPTAVVKTRMQVAGSGF 549
           +D   + TP FALS+TDINW RLDKTRFH+ GAVLFTAQ  +LHPTAVVKTRMQVA SG 
Sbjct: 1   MDTEAATTPQFALSDTDINWDRLDKTRFHIIGAVLFTAQSALLHPTAVVKTRMQVAASGL 60

Query: 548 GHMNGMSVFKNILKTDGVPGIFRGFGTAAFGYMPVRVVSLTSLEVSKDMMLKYTKGFDIP 369
            +M GMSVF +IL++DG+PGIFRGFGT+A G MP RV++LTSLE+SKD MLK+T+G DIP
Sbjct: 61  SNMKGMSVFTHILRSDGIPGIFRGFGTSAIGSMPGRVLALTSLEMSKDFMLKHTQGSDIP 120

Query: 368 EATRIGIANAVGGLMSHLVCCAYCVPLDVIVQRLMVQGLPGTTVCNGAFDVIHKVIRTEG 189
           EA+RIG+ANAV G++S+LV C Y VPLDVI QRLMVQGLPGTT C G FDVI +V+  EG
Sbjct: 121 EASRIGLANAVAGMVSNLVSCVYFVPLDVICQRLMVQGLPGTTYCKGPFDVIRRVVHAEG 180

Query: 188 IRGLYRGFGLTALTQSPASALWWGAYGAAQHVIWRSLGYENDMDSKPSHIEMVTVQATAG 9
           +RGLYRGFGLTA++QSPASALWWG+YGAAQH+IWRSLGY++DM+ KPSH+EMVTVQATAG
Sbjct: 181 VRGLYRGFGLTAVSQSPASALWWGSYGAAQHIIWRSLGYKDDMEKKPSHVEMVTVQATAG 240


>ref|XP_002274536.1| PREDICTED: solute carrier family 25 member 44 [Vitis vinifera]
           gi|297736782|emb|CBI25983.3| unnamed protein product
           [Vitis vinifera]
          Length = 324

 Score =  365 bits (937), Expect = 7e-99
 Identities = 172/242 (71%), Positives = 205/242 (84%)
 Frame = -2

Query: 734 MAVDAADSATPSFALSETDINWHRLDKTRFHVFGAVLFTAQLTILHPTAVVKTRMQVAGS 555
           MAV+  ++ATP  AL+ETDINW+RLDKTRFH+ GA+LFTAQ  +LHPTAVVKTRMQV GS
Sbjct: 1   MAVET-EAATPGLALAETDINWNRLDKTRFHIIGAILFTAQSALLHPTAVVKTRMQVDGS 59

Query: 554 GFGHMNGMSVFKNILKTDGVPGIFRGFGTAAFGYMPVRVVSLTSLEVSKDMMLKYTKGFD 375
           G  HM G+SVF++ILK+DG+PG+FRGFGT+A G +P RV++LTSLEVSKDMM KYTK  D
Sbjct: 60  GLSHMGGISVFRHILKSDGIPGLFRGFGTSAIGSLPGRVLALTSLEVSKDMMFKYTKHLD 119

Query: 374 IPEATRIGIANAVGGLMSHLVCCAYCVPLDVIVQRLMVQGLPGTTVCNGAFDVIHKVIRT 195
           +PEATR+GIAN V GL S+LV C Y VPLDV+ QRLMVQGLPGT  C+G FDV+HKV++ 
Sbjct: 120 MPEATRVGIANGVAGLSSNLVSCVYYVPLDVVCQRLMVQGLPGTAYCSGPFDVVHKVMKA 179

Query: 194 EGIRGLYRGFGLTALTQSPASALWWGAYGAAQHVIWRSLGYENDMDSKPSHIEMVTVQAT 15
           EG RG+YRGFGLTA+TQSPA ALWWG YGAAQH+IWRSL Y  + + KPSH+EM TVQA+
Sbjct: 180 EGFRGMYRGFGLTAVTQSPAYALWWGVYGAAQHMIWRSLDYRENTERKPSHLEMATVQAS 239

Query: 14  AG 9
           AG
Sbjct: 240 AG 241


>ref|XP_004147664.1| PREDICTED: solute carrier family 25 member 44-like [Cucumis
           sativus] gi|449514787|ref|XP_004164480.1| PREDICTED:
           solute carrier family 25 member 44-like [Cucumis
           sativus]
          Length = 327

 Score =  361 bits (926), Expect = 1e-97
 Identities = 169/242 (69%), Positives = 203/242 (83%)
 Frame = -2

Query: 734 MAVDAADSATPSFALSETDINWHRLDKTRFHVFGAVLFTAQLTILHPTAVVKTRMQVAGS 555
           MA+DA  +     ALS+TDINW+RLDKT+FH+ GA+LFT Q  +LHPTAVVKTRMQV GS
Sbjct: 1   MALDAEAAPAAELALSDTDINWNRLDKTKFHIIGAILFTVQSALLHPTAVVKTRMQVDGS 60

Query: 554 GFGHMNGMSVFKNILKTDGVPGIFRGFGTAAFGYMPVRVVSLTSLEVSKDMMLKYTKGFD 375
           G  HM G+SVF NILK+DG+ G++RGFGT+A G +P RV++LTSLEVSKD+MLKYT+  +
Sbjct: 61  GLSHMRGVSVFWNILKSDGISGLYRGFGTSAIGSLPGRVLALTSLEVSKDIMLKYTENLE 120

Query: 374 IPEATRIGIANAVGGLMSHLVCCAYCVPLDVIVQRLMVQGLPGTTVCNGAFDVIHKVIRT 195
           +PEATRIG+AN V G++S+LV C Y VPLDV+ QRLMVQGLPGTT CN   DV+ KV++ 
Sbjct: 121 MPEATRIGLANGVAGMISNLVSCIYYVPLDVVCQRLMVQGLPGTTYCNSPLDVVRKVMKA 180

Query: 194 EGIRGLYRGFGLTALTQSPASALWWGAYGAAQHVIWRSLGYENDMDSKPSHIEMVTVQAT 15
           EG RGLYRGFGLTA+TQSPASALWWG YGAAQH+IWRSLGY + M+ KPSH+EMVTVQAT
Sbjct: 181 EGFRGLYRGFGLTAVTQSPASALWWGVYGAAQHIIWRSLGYRDSMEKKPSHMEMVTVQAT 240

Query: 14  AG 9
           AG
Sbjct: 241 AG 242


>ref|XP_002312303.1| predicted protein [Populus trichocarpa] gi|222852123|gb|EEE89670.1|
           predicted protein [Populus trichocarpa]
          Length = 334

 Score =  353 bits (907), Expect = 2e-95
 Identities = 168/243 (69%), Positives = 200/243 (82%)
 Frame = -2

Query: 734 MAVDAADSATPSFALSETDINWHRLDKTRFHVFGAVLFTAQLTILHPTAVVKTRMQVAGS 555
           MAV+   ++    AL++TDINW RLDKT+FH+ GAVLFT Q  +LHPTAVVKTRMQVA S
Sbjct: 1   MAVETEVTSVTELALADTDINWARLDKTKFHIIGAVLFTVQQGLLHPTAVVKTRMQVADS 60

Query: 554 GFGHMNGMSVFKNILKTDGVPGIFRGFGTAAFGYMPVRVVSLTSLEVSKDMMLKYTKGFD 375
           G  HM G+SV K+IL+ DG+PG+FRGFGT+A G +P RV+SLT+LEVSKDMM KYT+  D
Sbjct: 61  GLSHMGGISVAKHILRNDGIPGLFRGFGTSAIGALPGRVLSLTALEVSKDMMFKYTEALD 120

Query: 374 IPEATRIGIANAVGGLMSHLVCCAYCVPLDVIVQRLMVQGLPGTTVCNGAFDVIHKVIRT 195
           +PEATR+GIAN V G++S+LV C Y VPLDVI QRLMVQGLPG     G FDV+ KV++T
Sbjct: 121 MPEATRVGIANGVAGMLSNLVSCVYYVPLDVICQRLMVQGLPGVASYKGPFDVMCKVMKT 180

Query: 194 EGIRGLYRGFGLTALTQSPASALWWGAYGAAQHVIWRSLGYENDMDSKPSHIEMVTVQAT 15
           EG RGLYRGFGLTA+TQ PASALWWG YGAAQH+IWRS+GY +D+D KPSH+EMVTVQA 
Sbjct: 181 EGFRGLYRGFGLTAVTQPPASALWWGTYGAAQHIIWRSMGYRDDIDKKPSHLEMVTVQAM 240

Query: 14  AGT 6
           AGT
Sbjct: 241 AGT 243


>ref|XP_003534799.1| PREDICTED: solute carrier family 25 member 44-like [Glycine max]
          Length = 330

 Score =  343 bits (879), Expect = 4e-92
 Identities = 166/241 (68%), Positives = 201/241 (83%), Gaps = 1/241 (0%)
 Frame = -2

Query: 728 VDAADSAT-PSFALSETDINWHRLDKTRFHVFGAVLFTAQLTILHPTAVVKTRMQVAGSG 552
           ++AA+ AT P  AL++TDINW RLDKT+FH+ GA+LFT Q  +LHPTAVVKTRMQVA   
Sbjct: 1   MEAAEPATAPQLALADTDINWDRLDKTKFHMIGAILFTVQSALLHPTAVVKTRMQVAAGS 60

Query: 551 FGHMNGMSVFKNILKTDGVPGIFRGFGTAAFGYMPVRVVSLTSLEVSKDMMLKYTKGFDI 372
                GMSVF +IL++DG+PGIFRGFGT+A G +P R+++LTSLEVSKD++LK+T+G  I
Sbjct: 61  ----RGMSVFSHILRSDGIPGIFRGFGTSAVGSVPGRILALTSLEVSKDIILKHTQGTHI 116

Query: 371 PEATRIGIANAVGGLMSHLVCCAYCVPLDVIVQRLMVQGLPGTTVCNGAFDVIHKVIRTE 192
           PEA+R+G+AN V GL+S+LV C Y VPLDVI QRLMVQGLPGTT C G  DV+ KV+  E
Sbjct: 117 PEASRVGLANGVAGLVSNLVSCVYFVPLDVICQRLMVQGLPGTTFCRGPLDVVRKVVEAE 176

Query: 191 GIRGLYRGFGLTALTQSPASALWWGAYGAAQHVIWRSLGYENDMDSKPSHIEMVTVQATA 12
           G RGLYRGFGLTALTQSPASALWWG+Y AAQH+IWRSLGY++D  +KPSH+EMVTVQATA
Sbjct: 177 GFRGLYRGFGLTALTQSPASALWWGSYAAAQHLIWRSLGYKDDTGNKPSHMEMVTVQATA 236

Query: 11  G 9
           G
Sbjct: 237 G 237


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