BLASTX nr result

ID: Coptis24_contig00019085 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019085
         (883 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACZ26527.1| suppressor of overexpression of CO 1 [Vitis vinif...   254   2e-65
ref|XP_002277773.1| PREDICTED: MADS-box protein SOC1 [Vitis vini...   253   3e-65
gb|AFK35913.1| unknown [Medicago truncatula]                          246   4e-63
gb|AEO20230.1| SOC1-like protein [Rosa hybrid cultivar]               244   3e-62
gb|ACJ86138.1| unknown [Medicago truncatula]                          240   3e-61

>gb|ACZ26527.1| suppressor of overexpression of CO 1 [Vitis vinifera]
          Length = 218

 Score =  254 bits (648), Expect = 2e-65
 Identities = 137/226 (60%), Positives = 163/226 (72%)
 Frame = +2

Query: 92  MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVGLIVFSPRGKLYEFCST 271
           MVRGKTQM+RIENATSRQVTFSKRRNGL KKAFELSVLCDAEV LI+FSPRGKLYEF S+
Sbjct: 1   MVRGKTQMRRIENATSRQVTFSKRRNGLFKKAFELSVLCDAEVALIIFSPRGKLYEFSSS 60

Query: 272 SLPKTIDRYQRHNRDKDTEGNNKVIENAQLFKDEVITMAKKIEFLETSRRKLLGEDLGSC 451
           S+ +TI+RYQRH +D  T        N Q  K E   MAKKIE LE S+RKLLGE LGSC
Sbjct: 61  SMQETIERYQRHTKDVHTNNYKTTEHNMQQLKHEAANMAKKIELLEISKRKLLGEGLGSC 120

Query: 452 STDELHETENQLERSLSLIRAQKAQLYKDKIEQLKEKERVLAEENAALHEKCGQRPLDLI 631
           S +EL + E QLERS+S IRA+K Q++K++IEQLKEKE+ LA ENA L EKCG +P    
Sbjct: 121 SIEELQQIEQQLERSVSSIRARKNQVFKEQIEQLKEKEKALAAENAMLCEKCGVQPYQAP 180

Query: 632 TQDLQAIPXXXXXXXXXXXXXTAAESQDSENDVETELFIGRPDSRS 769
            Q+ + +P             +A  SQ+S  DV T+LFIG P+ R+
Sbjct: 181 NQENETLP-------------SAERSQNS--DVSTDLFIGLPEGRA 211


>ref|XP_002277773.1| PREDICTED: MADS-box protein SOC1 [Vitis vinifera]
           gi|95116634|gb|ABF56527.1| MADS-box protein [Vitis
           vinifera] gi|296089122|emb|CBI38825.3| unnamed protein
           product [Vitis vinifera]
          Length = 218

 Score =  253 bits (647), Expect = 3e-65
 Identities = 137/226 (60%), Positives = 163/226 (72%)
 Frame = +2

Query: 92  MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVGLIVFSPRGKLYEFCST 271
           MVRGKTQM+RIENATSRQVTFSKRRNGL KKAFELSVLCDAEV LI+FSPRGKLYEF S+
Sbjct: 1   MVRGKTQMRRIENATSRQVTFSKRRNGLFKKAFELSVLCDAEVALIIFSPRGKLYEFSSS 60

Query: 272 SLPKTIDRYQRHNRDKDTEGNNKVIENAQLFKDEVITMAKKIEFLETSRRKLLGEDLGSC 451
           S+ +TI+RYQRH +D  T        N Q  K E   MAKKIE LE S+RKLLGE LGSC
Sbjct: 61  SMQETIERYQRHTKDVHTNNYKTTEHNMQHLKHEAANMAKKIELLEISKRKLLGEGLGSC 120

Query: 452 STDELHETENQLERSLSLIRAQKAQLYKDKIEQLKEKERVLAEENAALHEKCGQRPLDLI 631
           S +EL + E QLERS+S IRA+K Q++K++IEQLKEKE+ LA ENA L EKCG +P    
Sbjct: 121 SIEELQQIEQQLERSVSSIRARKNQVFKEQIEQLKEKEKALAAENAMLCEKCGVQPYQAP 180

Query: 632 TQDLQAIPXXXXXXXXXXXXXTAAESQDSENDVETELFIGRPDSRS 769
            Q+ + +P             +A  SQ+S  DV T+LFIG P+ R+
Sbjct: 181 NQENETLP-------------SAERSQNS--DVSTDLFIGLPEGRA 211


>gb|AFK35913.1| unknown [Medicago truncatula]
          Length = 224

 Score =  246 bits (629), Expect = 4e-63
 Identities = 133/226 (58%), Positives = 162/226 (71%)
 Frame = +2

Query: 92  MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVGLIVFSPRGKLYEFCST 271
           MVRGKTQMKRIENATSRQVTFSKRRNG LKKAFELSVLCDAEV LIVFSPRG+LYEF S+
Sbjct: 1   MVRGKTQMKRIENATSRQVTFSKRRNGSLKKAFELSVLCDAEVALIVFSPRGRLYEFTSS 60

Query: 272 SLPKTIDRYQRHNRDKDTEGNNKVIENAQLFKDEVITMAKKIEFLETSRRKLLGEDLGSC 451
           S+ +TI+RY+ H R  +T   ++ +EN Q  K+E   M KKI+ LETS+RKLLGE LGSC
Sbjct: 61  SILETIERYRSHTRINNTPTTSESVENTQQLKEEAENMMKKIDLLETSKRKLLGEGLGSC 120

Query: 452 STDELHETENQLERSLSLIRAQKAQLYKDKIEQLKEKERVLAEENAALHEKCGQRPLDLI 631
           S DEL + E QLERS+S IRA+K Q+++++IEQLKEKE+ L  ENA L EK G       
Sbjct: 121 SIDELQKIEQQLERSISKIRAKKTQVFREQIEQLKEKEKTLVAENAMLAEKYGNYSSQEA 180

Query: 632 TQDLQAIPXXXXXXXXXXXXXTAAESQDSENDVETELFIGRPDSRS 769
           T+D +                T A+     +DVETELFIG P++R+
Sbjct: 181 TKDQR---------ENIVEAETYADQSSPSSDVETELFIGLPETRT 217


>gb|AEO20230.1| SOC1-like protein [Rosa hybrid cultivar]
          Length = 215

 Score =  244 bits (622), Expect = 3e-62
 Identities = 133/230 (57%), Positives = 163/230 (70%), Gaps = 4/230 (1%)
 Frame = +2

Query: 92  MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVGLIVFSPRGKLYEFCST 271
           MVRGKTQM+RIENATSRQVTFSKRR+GLLKKAFELS+LCDAEV LI+FSPRGKLYEF S 
Sbjct: 1   MVRGKTQMRRIENATSRQVTFSKRRSGLLKKAFELSILCDAEVALIIFSPRGKLYEFASN 60

Query: 272 SLPKTIDRYQRHNRDKDTEGNNKVI---ENAQLFKDEVITMAKKIEFLETSRRKLLGEDL 442
           S+  TI+RY++H   KD + NNK +   +N Q  K E  +M K+IE LE S+RKLLGE L
Sbjct: 61  SMQTTIERYEKHT--KDNQANNKSVASEQNVQQLKHEATSMMKQIEHLEVSKRKLLGESL 118

Query: 443 GSCSTDELHETENQLERSLSLIRAQKAQLYKDKIEQLKEKERVLAEENAALHEKC-GQRP 619
           G CS DEL E E QLERS++ IRA+KAQ+YK++IEQL+EKERVL  EN  L+EKC   +P
Sbjct: 119 GLCSIDELQEIEQQLERSVNSIRARKAQVYKEQIEQLREKERVLTAENQRLNEKCEAMQP 178

Query: 620 LDLITQDLQAIPXXXXXXXXXXXXXTAAESQDSENDVETELFIGRPDSRS 769
              +++  + +               A       +DVETELFIG P+ RS
Sbjct: 179 RQPVSEQRENL---------------ACPESSPSSDVETELFIGLPERRS 213


>gb|ACJ86138.1| unknown [Medicago truncatula]
          Length = 227

 Score =  240 bits (613), Expect = 3e-61
 Identities = 128/226 (56%), Positives = 160/226 (70%)
 Frame = +2

Query: 92  MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVGLIVFSPRGKLYEFCST 271
           MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEV LIVFSPRG+LYEF S+
Sbjct: 1   MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASS 60

Query: 272 SLPKTIDRYQRHNRDKDTEGNNKVIENAQLFKDEVITMAKKIEFLETSRRKLLGEDLGSC 451
           S+ +TI+RY+ H R  +T   ++ +EN Q  K+E   M KKI+ LETS+RKLLGE LGSC
Sbjct: 61  SILETIERYRSHTRINNTPTTSESVENTQQLKEEAENMMKKIDLLETSKRKLLGEGLGSC 120

Query: 452 STDELHETENQLERSLSLIRAQKAQLYKDKIEQLKEKERVLAEENAALHEKCGQRPLDLI 631
           S DEL + E QLE+S++ IR +K ++++++I+QLKEKE+ L  EN  L EK G       
Sbjct: 121 SIDELQKIEQQLEKSINKIRVKKTKVFREQIDQLKEKEKALVAENVRLSEKYGNYSTQES 180

Query: 632 TQDLQAIPXXXXXXXXXXXXXTAAESQDSENDVETELFIGRPDSRS 769
           T+D +                  A+     +DVETELFIG P++RS
Sbjct: 181 TKDQR---------ENIAEVEPYADQSSPSSDVETELFIGLPETRS 217


Top