BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019082
         (534 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275126.1| PREDICTED: RNA polymerase II transcriptional...   102   4e-20
ref|XP_004146395.1| PREDICTED: RNA polymerase II transcriptional...    96   3e-18
gb|AFK40203.1| unknown [Lotus japonicus]                               92   5e-17
ref|NP_001047113.1| Os02g0553600 [Oryza sativa Japonica Group] g...    91   8e-17
ref|NP_196487.1| RNA polymerase II transcriptional coactivator K...    91   8e-17

>ref|XP_002275126.1| PREDICTED: RNA polymerase II transcriptional coactivator KIWI
           [Vitis vinifera] gi|147846591|emb|CAN79502.1|
           hypothetical protein VITISV_022689 [Vitis vinifera]
           gi|296082597|emb|CBI21602.3| unnamed protein product
           [Vitis vinifera]
          Length = 103

 Score =  102 bits (254), Expect = 4e-20
 Identities = 52/96 (54%), Positives = 62/96 (64%)
 Frame = -2

Query: 533 DSDDIIACEISKNRRVTVRSWQGKPVIDIREFYVKDGNTLPGKKGISLSMXXXXXXXXXX 354
           D D+II CEIS+NRRV+VR+WQGK  +DIREFYVKDG  +PGKK                
Sbjct: 33  DPDNIIVCEISRNRRVSVRNWQGKVQVDIREFYVKDGKQMPGKK---------------- 76

Query: 353 XXXXXXXXXXGISLSMDQWQILRDHMDAIDEAVADN 246
                     GISL+MDQW +LRDH++ IDEAVADN
Sbjct: 77  ----------GISLTMDQWNVLRDHVNEIDEAVADN 102


>ref|XP_004146395.1| PREDICTED: RNA polymerase II transcriptional coactivator KIWI-like
           [Cucumis sativus] gi|449527765|ref|XP_004170880.1|
           PREDICTED: RNA polymerase II transcriptional coactivator
           KIWI-like [Cucumis sativus]
          Length = 104

 Score = 96.3 bits (238), Expect = 3e-18
 Identities = 48/99 (48%), Positives = 63/99 (63%)
 Frame = -2

Query: 533 DSDDIIACEISKNRRVTVRSWQGKPVIDIREFYVKDGNTLPGKKGISLSMXXXXXXXXXX 354
           D+D+I+ CE+SKNRRV VR+WQGK V+DIREFYVKDG  +PGKK                
Sbjct: 31  DTDEIVVCELSKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKK---------------- 74

Query: 353 XXXXXXXXXXGISLSMDQWQILRDHMDAIDEAVADNT*G 237
                     GISLS+DQW +L +H++ ID+AV +N+ G
Sbjct: 75  ----------GISLSLDQWNVLLNHVEEIDKAVNENSSG 103


>gb|AFK40203.1| unknown [Lotus japonicus]
          Length = 106

 Score = 92.0 bits (227), Expect = 5e-17
 Identities = 46/96 (47%), Positives = 60/96 (62%)
 Frame = -2

Query: 533 DSDDIIACEISKNRRVTVRSWQGKPVIDIREFYVKDGNTLPGKKGISLSMXXXXXXXXXX 354
           D D I+ CEISKNRRV+VR+WQG+ V+DI EFYVKDG  +PGKK                
Sbjct: 36  DPDSIVVCEISKNRRVSVRNWQGRIVVDILEFYVKDGKQMPGKK---------------- 79

Query: 353 XXXXXXXXXXGISLSMDQWQILRDHMDAIDEAVADN 246
                     GISL+MDQW +LR+H++ ID+AV ++
Sbjct: 80  ----------GISLTMDQWNVLRNHIEEIDKAVNES 105


>ref|NP_001047113.1| Os02g0553600 [Oryza sativa Japonica Group]
           gi|50725768|dbj|BAD33299.1| transcriptional coactivator
           p15 (PC4) family protein-like [Oryza sativa Japonica
           Group] gi|113536644|dbj|BAF09027.1| Os02g0553600 [Oryza
           sativa Japonica Group] gi|125539866|gb|EAY86261.1|
           hypothetical protein OsI_07632 [Oryza sativa Indica
           Group] gi|215704132|dbj|BAG92972.1| unnamed protein
           product [Oryza sativa Japonica Group]
          Length = 101

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 47/94 (50%), Positives = 57/94 (60%)
 Frame = -2

Query: 527 DDIIACEISKNRRVTVRSWQGKPVIDIREFYVKDGNTLPGKKGISLSMXXXXXXXXXXXX 348
           DDI+  +ISKNRRV VR+W GK V+DIREFY KDG TLPG+K                  
Sbjct: 33  DDIVVAQISKNRRVAVRTWNGKVVVDIREFYEKDGKTLPGRK------------------ 74

Query: 347 XXXXXXXXGISLSMDQWQILRDHMDAIDEAVADN 246
                   GI L MDQW+ILRD++ AIDEA+ +N
Sbjct: 75  --------GIQLPMDQWKILRDNIKAIDEAIKEN 100


>ref|NP_196487.1| RNA polymerase II transcriptional coactivator KIWI [Arabidopsis
           thaliana] gi|37079587|sp|O65154.1|KIWI_ARATH RecName:
           Full=RNA polymerase II transcriptional coactivator KIWI
           gi|2997684|gb|AAC08574.1| putative transcriptional
           co-activator [Arabidopsis thaliana]
           gi|9955512|emb|CAC05451.1| putative transcriptional
           co-activator (KIWI) [Arabidopsis thaliana]
           gi|28466805|gb|AAO44011.1| At5g09250 [Arabidopsis
           thaliana] gi|110736129|dbj|BAF00036.1| putative
           transcriptional co-activator [Arabidopsis thaliana]
           gi|225898901|dbj|BAH30581.1| hypothetical protein
           [Arabidopsis thaliana] gi|332003981|gb|AED91364.1| RNA
           polymerase II transcriptional coactivator KIWI
           [Arabidopsis thaliana]
          Length = 107

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 48/94 (51%), Positives = 58/94 (61%)
 Frame = -2

Query: 530 SDDIIACEISKNRRVTVRSWQGKPVIDIREFYVKDGNTLPGKKGISLSMXXXXXXXXXXX 351
           SDDI+ C ISKNRRV+VR+W GK  IDIREFYVKDG TLPGKK                 
Sbjct: 38  SDDIVVCNISKNRRVSVRNWNGKIWIDIREFYVKDGKTLPGKK----------------- 80

Query: 350 XXXXXXXXXGISLSMDQWQILRDHMDAIDEAVAD 249
                    GISLS+DQW  LR+H + I++A++D
Sbjct: 81  ---------GISLSVDQWNTLRNHAEDIEKALSD 105