BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019078
         (892 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305441.1| predicted protein [Populus trichocarpa] gi|2...   302   8e-80
ref|XP_004134588.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   295   1e-77
ref|XP_002532829.1| dead box ATP-dependent RNA helicase, putativ...   290   3e-76
ref|XP_002279094.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   285   8e-75
ref|XP_003616240.1| DEAD-box ATP-dependent RNA helicase [Medicag...   262   7e-68

>ref|XP_002305441.1| predicted protein [Populus trichocarpa] gi|222848405|gb|EEE85952.1|
           predicted protein [Populus trichocarpa]
          Length = 518

 Score =  302 bits (773), Expect = 8e-80
 Identities = 150/185 (81%), Positives = 168/185 (90%)
 Frame = +3

Query: 336 SLKTTRKSGVERGFKGKTYPRLVKMLLSATLTHDPSKLSQLDLHHPLFLTTGSQRYQLPE 515
           SLKT R+ GVERGFKGK+YPRL KM+LSATLT DPSKL+QL+LHHPLFLTTG +RYQLPE
Sbjct: 250 SLKTIRRCGVERGFKGKSYPRLAKMVLSATLTQDPSKLAQLNLHHPLFLTTGQRRYQLPE 309

Query: 516 KLKSYKLICESKLKPLCLIALLQDLKEEKCIVFTSSVESTHRLSTLLKCFGGLEFKIKKY 695
           KL+SYKLIC SKLKPL L+A+LQ L  EKCIVFTSSVESTHRL TLL  FG L+ KIK+Y
Sbjct: 310 KLESYKLICVSKLKPLYLVAVLQHLGGEKCIVFTSSVESTHRLCTLLNFFGDLKVKIKEY 369

Query: 696 SGLQRQSVRSKTLKEFRDGDIQVLVASDAMTRGMDVEGVRTVINYDVPAYIKTYVHRAGR 875
           SGLQRQSVRSKTLK FR+G+IQVLV+SDAMTRGMD+EGVR +INYD+PAY+KTYVHRAGR
Sbjct: 370 SGLQRQSVRSKTLKAFREGEIQVLVSSDAMTRGMDIEGVRNIINYDMPAYVKTYVHRAGR 429

Query: 876 TARAG 890
           TARAG
Sbjct: 430 TARAG 434



 Score =  115 bits (289), Expect = 1e-23
 Identities = 56/66 (84%), Positives = 60/66 (90%)
 Frame = +1

Query: 1   EAGVCYDLEEQGVELQSSVDILVATPGRLMDHINTTKGFTLEHLRYLVVDETDRLLREAY 180
           EAG+CYD ++   ELQSSVDILVATPGRLMDHI TTKGFTLEHL YLVVDETDRLLRE+Y
Sbjct: 159 EAGICYDPQDVLQELQSSVDILVATPGRLMDHITTTKGFTLEHLCYLVVDETDRLLRESY 218

Query: 181 QSWLPT 198
           QSWLPT
Sbjct: 219 QSWLPT 224


>ref|XP_004134588.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 1-like [Cucumis
           sativus] gi|449490565|ref|XP_004158642.1| PREDICTED:
           DEAD-box ATP-dependent RNA helicase 1-like [Cucumis
           sativus]
          Length = 517

 Score =  295 bits (754), Expect = 1e-77
 Identities = 147/185 (79%), Positives = 164/185 (88%)
 Frame = +3

Query: 336 SLKTTRKSGVERGFKGKTYPRLVKMLLSATLTHDPSKLSQLDLHHPLFLTTGSQRYQLPE 515
           SLKT R+ GVERGFKGK YPRL KM+LSATLT DP KL+QLDLHHPLFLTTG +RY+LPE
Sbjct: 247 SLKTIRRFGVERGFKGKPYPRLAKMVLSATLTQDPGKLAQLDLHHPLFLTTGKRRYKLPE 306

Query: 516 KLKSYKLICESKLKPLCLIALLQDLKEEKCIVFTSSVESTHRLSTLLKCFGGLEFKIKKY 695
           KL+SY +ICESKLKPL L+ALLQ L EEKCIVFTSSVESTHRL +LL  F  LE KIK+Y
Sbjct: 307 KLESYMMICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCSLLNFFEDLELKIKEY 366

Query: 696 SGLQRQSVRSKTLKEFRDGDIQVLVASDAMTRGMDVEGVRTVINYDVPAYIKTYVHRAGR 875
           SGLQRQS+RSKTL  FR G+IQVLV+SDAMTRGMDVEGV+ VINYD+PA+IKTY+HRAGR
Sbjct: 367 SGLQRQSLRSKTLNAFRGGEIQVLVSSDAMTRGMDVEGVKNVINYDMPAFIKTYIHRAGR 426

Query: 876 TARAG 890
           TARAG
Sbjct: 427 TARAG 431



 Score =  120 bits (300), Expect = 6e-25
 Identities = 57/66 (86%), Positives = 62/66 (93%)
 Frame = +1

Query: 1   EAGVCYDLEEQGVELQSSVDILVATPGRLMDHINTTKGFTLEHLRYLVVDETDRLLREAY 180
           EAG+CYD ++  VELQSSVDILVATPGRLMDHIN TKGFTL+HLRYLV+DETDRLLREAY
Sbjct: 156 EAGICYDPDDFLVELQSSVDILVATPGRLMDHINFTKGFTLQHLRYLVIDETDRLLREAY 215

Query: 181 QSWLPT 198
           QSWLPT
Sbjct: 216 QSWLPT 221


>ref|XP_002532829.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223527420|gb|EEF29559.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 469

 Score =  290 bits (742), Expect = 3e-76
 Identities = 146/180 (81%), Positives = 159/180 (88%)
 Frame = +3

Query: 351 RKSGVERGFKGKTYPRLVKMLLSATLTHDPSKLSQLDLHHPLFLTTGSQRYQLPEKLKSY 530
           + S VERGFKGK+YPRL KM+LSATLT DPSKL QLDLHHPLFLTTG  RYQLPEKL+SY
Sbjct: 228 KDSSVERGFKGKSYPRLAKMVLSATLTQDPSKLVQLDLHHPLFLTTGQSRYQLPEKLESY 287

Query: 531 KLICESKLKPLCLIALLQDLKEEKCIVFTSSVESTHRLSTLLKCFGGLEFKIKKYSGLQR 710
           ++ICE KLKPL L+ALLQ+L  EKCIVF SSVESTHRL TLLK FG L+ KIK+YSGLQ 
Sbjct: 288 RVICEPKLKPLYLVALLQNLVGEKCIVFASSVESTHRLCTLLKFFGDLKVKIKEYSGLQH 347

Query: 711 QSVRSKTLKEFRDGDIQVLVASDAMTRGMDVEGVRTVINYDVPAYIKTYVHRAGRTARAG 890
           QSVRSKTLK FR+G IQVLV+SDAMTRGMDVEGVR VINYD PAYIKTY+HRAGRTARAG
Sbjct: 348 QSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVRNVINYDKPAYIKTYIHRAGRTARAG 407



 Score = 72.0 bits (175), Expect = 2e-10
 Identities = 36/49 (73%), Positives = 41/49 (83%), Gaps = 2/49 (4%)
 Frame = +1

Query: 1   EAGVCYDLEEQGV--ELQSSVDILVATPGRLMDHINTTKGFTLEHLRYL 141
           EAG+CYD ++  +  ELQ+SVDILVATPGRLMDHI  TKGFTLEHL YL
Sbjct: 157 EAGICYDRDDVILMQELQTSVDILVATPGRLMDHITNTKGFTLEHLCYL 205


>ref|XP_002279094.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 1 [Vitis vinifera]
           gi|297740757|emb|CBI30939.3| unnamed protein product
           [Vitis vinifera]
          Length = 516

 Score =  285 bits (730), Expect = 8e-75
 Identities = 142/185 (76%), Positives = 160/185 (86%)
 Frame = +3

Query: 336 SLKTTRKSGVERGFKGKTYPRLVKMLLSATLTHDPSKLSQLDLHHPLFLTTGSQRYQLPE 515
           S+ T R+ GVERGFKG++YPRLVK++LSATLT DPSKL+ LDLHHPL LT G +RYQLPE
Sbjct: 247 SMNTIRRCGVERGFKGRSYPRLVKIVLSATLTQDPSKLALLDLHHPLLLTAGQRRYQLPE 306

Query: 516 KLKSYKLICESKLKPLCLIALLQDLKEEKCIVFTSSVESTHRLSTLLKCFGGLEFKIKKY 695
           KLKS+KLICESKLKPL L+ALL+DL  EKCIVFTSSVES HRL TLL  FG L+ KI +Y
Sbjct: 307 KLKSFKLICESKLKPLYLVALLRDLGGEKCIVFTSSVESAHRLCTLLNFFGDLQIKIGEY 366

Query: 696 SGLQRQSVRSKTLKEFRDGDIQVLVASDAMTRGMDVEGVRTVINYDVPAYIKTYVHRAGR 875
           SGLQ Q VRSKTL+EFR G IQVL++SD MTRGMDVEGVR VINYDVP +IKTY+HRAGR
Sbjct: 367 SGLQHQRVRSKTLEEFRGGKIQVLISSDGMTRGMDVEGVRNVINYDVPKFIKTYIHRAGR 426

Query: 876 TARAG 890
           TARAG
Sbjct: 427 TARAG 431



 Score =  124 bits (311), Expect = 3e-26
 Identities = 59/66 (89%), Positives = 63/66 (95%)
 Frame = +1

Query: 1   EAGVCYDLEEQGVELQSSVDILVATPGRLMDHINTTKGFTLEHLRYLVVDETDRLLREAY 180
           EAG+CYD E+  +ELQSSVDILVATPGRLMDHINTTKGFTL+HLRYLVVDETDRLLREAY
Sbjct: 156 EAGICYDPEDISLELQSSVDILVATPGRLMDHINTTKGFTLKHLRYLVVDETDRLLREAY 215

Query: 181 QSWLPT 198
           QSWLPT
Sbjct: 216 QSWLPT 221


>ref|XP_003616240.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
           gi|355517575|gb|AES99198.1| DEAD-box ATP-dependent RNA
           helicase [Medicago truncatula]
          Length = 497

 Score =  262 bits (670), Expect = 7e-68
 Identities = 131/185 (70%), Positives = 149/185 (80%)
 Frame = +3

Query: 336 SLKTTRKSGVERGFKGKTYPRLVKMLLSATLTHDPSKLSQLDLHHPLFLTTGSQRYQLPE 515
           +L+T R+ GVERGFK K YPRL KM+LSATLT DP +L QL+LHHPL L  G  RY+LPE
Sbjct: 247 ALRTRRRCGVERGFKDKPYPRLAKMVLSATLTQDPGRLIQLNLHHPLLLKAGQMRYRLPE 306

Query: 516 KLKSYKLICESKLKPLCLIALLQDLKEEKCIVFTSSVESTHRLSTLLKCFGGLEFKIKKY 695
            L+SYKLICE K+KPL LIALL+ L EEKC+VFT SV+STHRL  LL CF  L   IK+Y
Sbjct: 307 NLESYKLICEKKVKPLYLIALLKSLGEEKCLVFTKSVDSTHRLCQLLNCFEDLRIDIKEY 366

Query: 696 SGLQRQSVRSKTLKEFRDGDIQVLVASDAMTRGMDVEGVRTVINYDVPAYIKTYVHRAGR 875
           S LQ Q VRSKTL EFR G  QVL++SDA+TRGMDVEGVR VINYDVP +IKT+VHRAGR
Sbjct: 367 SSLQHQRVRSKTLNEFRKGVFQVLLSSDALTRGMDVEGVRNVINYDVPKFIKTHVHRAGR 426

Query: 876 TARAG 890
           TARAG
Sbjct: 427 TARAG 431



 Score =  102 bits (253), Expect = 2e-19
 Identities = 52/67 (77%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
 Frame = +1

Query: 1   EAGVCYDLEEQGV-ELQSSVDILVATPGRLMDHINTTKGFTLEHLRYLVVDETDRLLREA 177
           + G CYD     +   QS VDILVATPGRLMDHINTT GFTLEHL YLVVDETDRLLREA
Sbjct: 155 DIGTCYDPHCISLPRFQSKVDILVATPGRLMDHINTTIGFTLEHLYYLVVDETDRLLREA 214

Query: 178 YQSWLPT 198
           YQSWLPT
Sbjct: 215 YQSWLPT 221