BLASTX nr result

ID: Coptis24_contig00019066 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019066
         (879 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310566.1| predicted protein [Populus trichocarpa] gi|2...   181   2e-43
emb|CAN82837.1| hypothetical protein VITISV_030872 [Vitis vinifera]   163   4e-38
ref|XP_002531252.1| conserved hypothetical protein [Ricinus comm...   162   9e-38
ref|XP_002307089.1| predicted protein [Populus trichocarpa] gi|2...   158   1e-36
ref|XP_003601959.1| hypothetical protein MTR_3g087280 [Medicago ...   123   6e-26

>ref|XP_002310566.1| predicted protein [Populus trichocarpa] gi|222853469|gb|EEE91016.1|
           predicted protein [Populus trichocarpa]
          Length = 193

 Score =  181 bits (460), Expect = 2e-43
 Identities = 95/193 (49%), Positives = 124/193 (64%), Gaps = 4/193 (2%)
 Frame = -2

Query: 809 LSSLNCNLKIIRAKNVEFVSVGNLFVRYYLLTEKDTRIRLTSRDIPSTCEPCWNESITFE 630
           ++ L+C ++I++AKNVEF S G+LFVRYYL T    RI+L SR+I +     WNES + E
Sbjct: 1   MTCLSCEIEILQAKNVEFKSHGSLFVRYYLSTGNSKRIQLNSREISAKANLFWNESFSLE 60

Query: 629 CLGDKDVINKLTQQSVVFELRWRKAASAFGKFGGSKLLFRAEVRWKDVLESAEISIEKWI 450
           C G +D IN L QQ+VVFELRWR      GK GGS+LL RAEV WK V+ES ++ +E+W+
Sbjct: 61  CSGTEDSINNLKQQTVVFELRWRSTNPILGKIGGSQLLGRAEVPWKTVVESPKLEMERWV 120

Query: 449 TSATTSKFVPEGFKPPALQIEMRVDQKAFHML---KRCQVRSTKWNECG-CRNGCCHGRD 282
           T       VP+  KPPA+QI MRV   A   +   KR   R  +W+ECG C++  C   D
Sbjct: 121 TMIPKKGSVPDDVKPPAVQIAMRVRVPAMAEMQEKKRRNGRLKRWDECGCCKDSGCRCED 180

Query: 281 EDIFALAAAMEVL 243
            DIF L AA+E L
Sbjct: 181 YDIFVLVAALEAL 193


>emb|CAN82837.1| hypothetical protein VITISV_030872 [Vitis vinifera]
          Length = 194

 Score =  163 bits (413), Expect = 4e-38
 Identities = 89/195 (45%), Positives = 120/195 (61%), Gaps = 2/195 (1%)
 Frame = -2

Query: 827 MGATQNLSSLNCNLKIIRAKNVEFVSVGNLFVRYYLLTEKDTRIRLTSRDIPSTCEPCWN 648
           MGA+Q LSSL+C ++I+RAKN+E  + G LFVRYYL    + R+ L SR+I S  +  W+
Sbjct: 1   MGASQCLSSLSCEIRIMRAKNIELKTEGKLFVRYYLSAGNNQRVGLNSREISSKSDLFWD 60

Query: 647 ESITFECLGDKDVINKLTQQSVVFELRWRKAASAFGKFGGSKLLFRAEVRWKDVLESAEI 468
           ES + ECLG ++ I  L Q+ VVFELRWR      G+   S +L R E+ W  V  S E+
Sbjct: 61  ESFSLECLGSEESIQSLMQERVVFELRWRSKVPVLGRVRKSHVLGRVEIPWTSVFASKEM 120

Query: 467 SIEKWITSATT-SKFVPEGFKPPALQIEMRVDQKAFHMLKRCQVRSTKWNECGCRNGCCH 291
            IEKW++  +T S+ V +  +PPALQ+ M+V         R   R  KW+ECGC +G C 
Sbjct: 121 EIEKWVSMVSTGSRVVDQDGQPPALQVAMKVRIPKVAERSR---RVMKWDECGCTDGGCT 177

Query: 290 GRDED-IFALAAAME 249
             D D IFALAA +E
Sbjct: 178 CVDADHIFALAAGLE 192


>ref|XP_002531252.1| conserved hypothetical protein [Ricinus communis]
           gi|223529137|gb|EEF31116.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 198

 Score =  162 bits (410), Expect = 9e-38
 Identities = 85/192 (44%), Positives = 122/192 (63%), Gaps = 5/192 (2%)
 Frame = -2

Query: 803 SLNCNLKIIRAKNVEFVSVGNLFVRYYLLTEKDTRIRLTSRDIPSTCEPCWNESITFECL 624
           SL+C + I++AKN+E  S GNLFVRYYL +  + RI++ +++I S  +  WNE  + ECL
Sbjct: 7   SLSCEISIVQAKNLELKSHGNLFVRYYLSSGHNKRIQINTQEISSKSDLFWNEFFSLECL 66

Query: 623 GDKDVINKLTQQSVVFELRWRKAASAFGKFGGSKLLFRAEVRWKDVLESAEISIEKWI-- 450
           G +D IN L Q+SVVFELRWR   S  GK GGS+LL RA++ WK VLES ++ IEKW+  
Sbjct: 67  GTQDSINNLKQESVVFELRWRNTKSILGKIGGSQLLGRAKIPWKTVLESPKMEIEKWVMM 126

Query: 449 TSATTSKFVPEGFKPPALQIEMRVDQKAFHMLKRCQVRSTKW--NECG-CRNGCCHGRDE 279
            S      + +  KPP++QI +RV       +++   +  KW  ++CG C++  C  +D 
Sbjct: 127 VSKKNCSVLADDVKPPSVQIALRVRVPEMVAMEKRNGKLRKWENDDCGCCKDSGCRCQDY 186

Query: 278 DIFALAAAMEVL 243
           +IFA  AA E L
Sbjct: 187 EIFASVAAFEAL 198


>ref|XP_002307089.1| predicted protein [Populus trichocarpa] gi|222856538|gb|EEE94085.1|
           predicted protein [Populus trichocarpa]
          Length = 202

 Score =  158 bits (400), Expect = 1e-36
 Identities = 88/199 (44%), Positives = 117/199 (58%), Gaps = 6/199 (3%)
 Frame = -2

Query: 821 ATQNLSS--LNCNLKIIRAKNVEFVSVGNLFVRYYLLTEKDTRIRLTSRDIPSTCEPCWN 648
           AT+ ++S  L   ++I +AKN+E  S G+LFVRYYL   K+ RI+L SR+I S     WN
Sbjct: 4   ATEGIASTCLGIEIEIFQAKNIEVKSHGSLFVRYYLSAGKNKRIQLKSREISSKSNLFWN 63

Query: 647 ESITFECLGDKDVINKLTQQSVVFELRWRKAASAFGKFGGSKLLFRAEVRWKDVLESAEI 468
           ES + EC+G +D IN L Q++VVFELRWR       K GGS+LL RAEV WK VLES  +
Sbjct: 64  ESFSLECIGTEDSINNLKQETVVFELRWRNTNPILAKIGGSQLLGRAEVPWKTVLESPNL 123

Query: 467 SIEKWITSATTSKFVPEGFKPPALQIEMRV---DQKAFHMLKRCQVRSTKWNECG-CRNG 300
            +E W+        VP+  KPP++QI MR    +        R   R  K + CG C++ 
Sbjct: 124 EMESWVMMVPKKGSVPDDVKPPSVQIAMRARVPEMAEMEKKNRRDGRLRKRDGCGCCKDS 183

Query: 299 CCHGRDEDIFALAAAMEVL 243
            C   D +IFAL  A+E L
Sbjct: 184 GCRCEDYEIFALVVALEAL 202


>ref|XP_003601959.1| hypothetical protein MTR_3g087280 [Medicago truncatula]
           gi|355491007|gb|AES72210.1| hypothetical protein
           MTR_3g087280 [Medicago truncatula]
          Length = 392

 Score =  123 bits (308), Expect = 6e-26
 Identities = 69/194 (35%), Positives = 109/194 (56%), Gaps = 9/194 (4%)
 Frame = -2

Query: 803 SLNCNLKIIRAKNVEFV-SVGNLFVRYYLLTEKDTRIRLTSRDIPSTCEPCWNESITFEC 627
           + +C L+II+A+N+EF+ S  NLF R YL T  D RI+L S+ + +   P W+ES   +C
Sbjct: 11  NFSCELRIIQARNIEFIKSTKNLFARLYLPTGNDKRIQLNSKSVSTKSVPFWDESFNLDC 70

Query: 626 LGDKDVINKLTQQSVVFELRWRKAASAFGKFGGSKLLFRAEVRWKDVLESAEISIEKWI- 450
              ++ +  L QQS+V ELR R       K  GS+L+ + ++ WK +LE+  + ++KW+ 
Sbjct: 71  SCPQEFLENLNQQSLVLELRQR-------KIWGSQLIGKGDIPWKVILEAQNMELKKWLK 123

Query: 449 TSATTSKFVPEG-FKPPALQIEMRVD-QKAFHMLKRCQVRSTKWNECGCRNG-----CCH 291
               +     EG F  P +++E+++       M K+ + R   WNECGC+NG      C 
Sbjct: 124 MDLVSGSECKEGMFSTPEVEVEIKIRVASVVEMEKQNKRRLNNWNECGCKNGHDHQAWCS 183

Query: 290 GRDEDIFALAAAME 249
             + DIFA  AA+E
Sbjct: 184 AEECDIFAFGAALE 197



 Score =  122 bits (305), Expect = 1e-25
 Identities = 71/193 (36%), Positives = 107/193 (55%), Gaps = 9/193 (4%)
 Frame = -2

Query: 800 LNCNLKIIRAKNVEFV-SVGNLFVRYYLLTEKDTRIRLTSRDIPSTCEPCWNESITFECL 624
           +NC L+II+A+NVE V S  NLF R YL T  + RI+L S+ + +   P W+ES   +C 
Sbjct: 205 INCELRIIQARNVESVKSTKNLFARLYLPTGNNKRIQLNSKSVSTKSVPFWDESFNLDCS 264

Query: 623 GDKDVINKLTQQSVVFELRWRKAASAFGKFGGSKLLFRAEVRWKDVLESAEISIEKWITS 444
             ++ +  L QQS+  ELR R       K  GS+L+ + E+ WK +LES  + ++KW+  
Sbjct: 265 CPQEFLENLNQQSLEVELRQR-------KMWGSQLIGKGEIPWKVILESQNMELKKWLKM 317

Query: 443 --ATTSKFVPEGFKPPALQIEMRVD-QKAFHMLKRCQVRSTKWNECGCRNG-----CCHG 288
              + S      F  P +++E+++       M K+ + R   WNECGC+NG      C  
Sbjct: 318 DLVSRSDCKEAMFPTPEVEVEIKIRVASVAEMEKKNKRRLNNWNECGCKNGHDHNAWCSA 377

Query: 287 RDEDIFALAAAME 249
            D D+FAL AA+E
Sbjct: 378 EDCDLFALGAALE 390


Top