BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019065
         (1075 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_193185.1| SMAD/FHA domain-containing protein [Arabidopsis...    83   1e-13
ref|XP_002315723.1| predicted protein [Populus trichocarpa] gi|2...    83   1e-13
ref|XP_004134423.1| PREDICTED: FHA domain-containing protein At4...    80   7e-13
pdb|1UHT|A Chain A, Solution Structure Of The Fha Domain Of Arab...    79   1e-12
ref|XP_002523037.1| conserved hypothetical protein [Ricinus comm...    77   6e-12

>ref|NP_193185.1| SMAD/FHA domain-containing protein [Arabidopsis thaliana]
            gi|73921130|sp|O23305.1|Y4449_ARATH RecName: Full=FHA
            domain-containing protein At4g14490
            gi|2244805|emb|CAB10228.1| hypothetical protein
            [Arabidopsis thaliana] gi|7268155|emb|CAB78491.1|
            hypothetical protein [Arabidopsis thaliana]
            gi|20466564|gb|AAM20599.1| unknown protein [Arabidopsis
            thaliana] gi|22136374|gb|AAM91265.1| unknown protein
            [Arabidopsis thaliana] gi|332658050|gb|AEE83450.1|
            SMAD/FHA domain-containing protein [Arabidopsis thaliana]
          Length = 386

 Score = 82.8 bits (203), Expect = 1e-13
 Identities = 51/112 (45%), Positives = 71/112 (63%), Gaps = 4/112 (3%)
 Frame = -3

Query: 1043 PILKLEVVKGPRKDPSFSSK---RIRIGRVWK-NSLKIKEEGVSEKHLLIEFDDKSRKWV 876
            P L+L  VKGPR+  +   K    IR+GR+ + N + IK+ G+S KHL IE D  S  WV
Sbjct: 4    PSLRLVFVKGPREGDALDYKPGSTIRVGRIVRGNEIAIKDAGISTKHLRIESD--SGNWV 61

Query: 875  ICDLCSTNGTLLNHCLIHPKKWMSLRDRDLIRIGEVTSIKVAILQVESEEKK 720
            I DL S+NGTLLN   + P+  ++L D D+I++GE TSI V  +  + +EKK
Sbjct: 62   IQDLGSSNGTLLNSNALDPETSVNLGDGDVIKLGEYTSILVNFVIDDFQEKK 113


>ref|XP_002315723.1| predicted protein [Populus trichocarpa] gi|222864763|gb|EEF01894.1|
            predicted protein [Populus trichocarpa]
          Length = 383

 Score = 82.8 bits (203), Expect = 1e-13
 Identities = 56/161 (34%), Positives = 89/161 (55%), Gaps = 6/161 (3%)
 Frame = -3

Query: 1043 PILKLEVVKGPRKDPSFSSK---RIRIGRVWK-NSLKIKEEGVSEKHLLIEFDDKSRKWV 876
            PILKL +V+GPR+  +   +    +RIGRV + N++ IK+ G+S KHL I    +  KW 
Sbjct: 4    PILKLTMVRGPREGETLEFRPGSTVRIGRVVRGNNVPIKDAGISSKHLAIV--SEPGKWS 61

Query: 875  ICDLCSTNGTLLNHCLIHPKKWMSLRDRDLIRIGEVTSIKVAI-LQVESEEKKQDSVYTS 699
            + DL S+NGT LN   + P K   LRD D I++GE+TSI V   +  E+ + +++    +
Sbjct: 62   LQDLDSSNGTTLNTTTLSPYKSFDLRDGDTIKLGELTSILVQFNVHEETSQLRRNPGRRA 121

Query: 698  TPLNTQTPIVVNWSRQGG-RLRRGGTPLSSGNFERMEMEQD 579
               +    +  N SR+G    R     L   N E++E++ +
Sbjct: 122  KESSKVGSVAANRSRRGNEEERENAENLEEENVEKLEVKSE 162


>ref|XP_004134423.1| PREDICTED: FHA domain-containing protein At4g14490-like [Cucumis
            sativus]
          Length = 406

 Score = 80.5 bits (197), Expect = 7e-13
 Identities = 63/200 (31%), Positives = 99/200 (49%), Gaps = 18/200 (9%)
 Frame = -3

Query: 1037 LKLEVVKGPRKDPSFS---SKRIRIGRVWK-NSLKIKEEGVSEKHLLIEFDDKSRKWVIC 870
            + L +VKGPR+  +        IRIGR+ + NS+ IK+ G+S KHL IE +  S  W++ 
Sbjct: 6    ITLIIVKGPREGETLDFPPGATIRIGRIVRGNSVAIKDAGISTKHLSIESESVSGNWMLR 65

Query: 869  DLCSTNGTLLNHCLIHPKKWMSLRDRDLIRIGEVTSIKVAILQVESEEKKQDSVYTSTPL 690
            DL S+NGT +N   + P    +L D D I+ GE+TSI V I   E    +++    +   
Sbjct: 66   DLDSSNGTFVNDIKLPPHDAFALHDGDTIKCGELTSIFVRINSNEEPRSRRNPRRKAVEK 125

Query: 689  NTQTPIVVNWSRQGGRLRR--------GG---TPLSSGNFERMEME---QDNVDGSIVER 552
             T + +V + +   GR R+        GG     + SG   R       +D +D  + + 
Sbjct: 126  CTSSDVVGSVAGTRGRRRKVVEEDSVVGGCNDAMVESGRCLRSRKGRGLKDEIDSQVPD- 184

Query: 551  RRGGKHTENLVKMGMKQGNV 492
                K TE+ + +G + GNV
Sbjct: 185  ---CKKTEDKIDVGRESGNV 201


>pdb|1UHT|A Chain A, Solution Structure Of The Fha Domain Of Arabidopsis Thaliana
            Hypothetical Protein
          Length = 118

 Score = 79.3 bits (194), Expect = 1e-12
 Identities = 49/108 (45%), Positives = 66/108 (61%), Gaps = 4/108 (3%)
 Frame = -3

Query: 1064 GGGAQRGPILKLEVVKGPRKDPSFSSK---RIRIGRVWK-NSLKIKEEGVSEKHLLIEFD 897
            G      P L+L  VKGPR+  +   K    IR+GR+ + N + IK+ G+S KHL IE D
Sbjct: 4    GSSGMVTPSLRLVFVKGPREGDALDYKPGSTIRVGRIVRGNEIAIKDAGISTKHLRIESD 63

Query: 896  DKSRKWVICDLCSTNGTLLNHCLIHPKKWMSLRDRDLIRIGEVTSIKV 753
              S  WVI DL S+NGTLLN   + P+  ++L D D+I++GE TSI V
Sbjct: 64   --SGNWVIQDLGSSNGTLLNSNALDPETSVNLGDGDVIKLGEYTSILV 109


>ref|XP_002523037.1| conserved hypothetical protein [Ricinus communis]
            gi|223537720|gb|EEF39341.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 455

 Score = 77.4 bits (189), Expect = 6e-12
 Identities = 60/177 (33%), Positives = 93/177 (52%), Gaps = 6/177 (3%)
 Frame = -3

Query: 1037 LKLEVVKGPRKDPSF---SSKRIRIGRVWK-NSLKIKEEGVSEKHLLIEFDDKSR-KWVI 873
            LKL V++GP+K  +F   S   ++IGRV + N+L IK++G+S KHL+I  +  S  KW++
Sbjct: 6    LKLVVLQGPKKGETFEFPSKSTVKIGRVVRGNNLPIKDDGISSKHLVIGPESPSSCKWIV 65

Query: 872  CDLCSTNGTLLNHCLIHPKKWMSLRDRDLIRIGEVTSIKVAILQVESEEKKQDSVYTSTP 693
             DL S+NGT LN  L+ P     L D D +++G  TSI V     ESEE  Q   Y    
Sbjct: 66   QDLDSSNGTSLNSLLLPPFTPFVLHDGDTLKLGAETSILVRF--QESEEPSQLRRYPKRK 123

Query: 692  LNTQTPIVVNWSRQGGRLRRGGTPLSSGNFERMEMEQ-DNVDGSIVERRRGGKHTEN 525
            +  ++ I          +RRG  P  +   +  E+E  + ++  +   R+    TE+
Sbjct: 124  VK-ESVIKATDEETKNNVRRGRPP-KARVLDAKELENVEKLNVGVTRNRKNEDKTES 178