BLASTX nr result

ID: Coptis24_contig00019064 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019064
         (437 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284600.2| PREDICTED: uncharacterized protein LOC100248...   241   3e-62
emb|CBI18973.3| unnamed protein product [Vitis vinifera]              238   5e-61
ref|XP_003527950.1| PREDICTED: uncharacterized protein LOC100793...   216   2e-54
ref|XP_002520315.1| F-box and wd40 domain protein, putative [Ric...   215   3e-54
ref|XP_004161204.1| PREDICTED: uncharacterized LOC101212974, par...   206   2e-51

>ref|XP_002284600.2| PREDICTED: uncharacterized protein LOC100248990 [Vitis vinifera]
          Length = 1817

 Score =  241 bits (616), Expect = 3e-62
 Identities = 112/145 (77%), Positives = 126/145 (86%)
 Frame = +1

Query: 1   VGGGFIFGSSFDKTVHVWSLQNFSHVQSFVSHEHRVMSVVFVNATEPLCISGDSGSGICV 180
           VGGGF+F SSFDKT+HVWSLQ+F+ V  F  HEHRVM+VVFV+  +PLCISGD G GI V
Sbjct: 544 VGGGFLFSSSFDKTIHVWSLQDFTLVHQFRGHEHRVMAVVFVDEEQPLCISGDIGGGIFV 603

Query: 181 WSIGVVLGQERLKKWYEQKDWRYSGIHALAVSGTEHLYTGSGDKSIKEWSLRDYTLTCTM 360
           W I + LGQE LKKW+EQKDWRYSGIHALA+SGT +LYTGSGDKSIK WSL+D TL+CTM
Sbjct: 604 WGISIPLGQEPLKKWFEQKDWRYSGIHALAISGTGYLYTGSGDKSIKAWSLQDCTLSCTM 663

Query: 361 NGHKSVVSSLAVCDGVLYSGSWDGT 435
           NGHKSVVS+LAV DGVLYSGSWDGT
Sbjct: 664 NGHKSVVSALAVSDGVLYSGSWDGT 688


>emb|CBI18973.3| unnamed protein product [Vitis vinifera]
          Length = 734

 Score =  238 bits (606), Expect = 5e-61
 Identities = 110/143 (76%), Positives = 124/143 (86%)
 Frame = +1

Query: 7   GGFIFGSSFDKTVHVWSLQNFSHVQSFVSHEHRVMSVVFVNATEPLCISGDSGSGICVWS 186
           GGF+F SSFDKT+HVWSLQ+F+ V  F  HEHRVM+VVFV+  +PLCISGD G GI VW 
Sbjct: 462 GGFLFSSSFDKTIHVWSLQDFTLVHQFRGHEHRVMAVVFVDEEQPLCISGDIGGGIFVWG 521

Query: 187 IGVVLGQERLKKWYEQKDWRYSGIHALAVSGTEHLYTGSGDKSIKEWSLRDYTLTCTMNG 366
           I + LGQE LKKW+EQKDWRYSGIHALA+SGT +LYTGSGDKSIK WSL+D TL+CTMNG
Sbjct: 522 ISIPLGQEPLKKWFEQKDWRYSGIHALAISGTGYLYTGSGDKSIKAWSLQDCTLSCTMNG 581

Query: 367 HKSVVSSLAVCDGVLYSGSWDGT 435
           HKSVVS+LAV DGVLYSGSWDGT
Sbjct: 582 HKSVVSALAVSDGVLYSGSWDGT 604


>ref|XP_003527950.1| PREDICTED: uncharacterized protein LOC100793437 [Glycine max]
          Length = 1815

 Score =  216 bits (549), Expect = 2e-54
 Identities = 97/145 (66%), Positives = 119/145 (82%)
 Frame = +1

Query: 1   VGGGFIFGSSFDKTVHVWSLQNFSHVQSFVSHEHRVMSVVFVNATEPLCISGDSGSGICV 180
           VGG ++  SSFDKTVHVWSLQ+FSH+ +F  HE++VM++V+V+  EPLCISGDSG GI +
Sbjct: 546 VGGRYLLSSSFDKTVHVWSLQDFSHLHTFRGHENKVMALVYVDEEEPLCISGDSGGGIFI 605

Query: 181 WSIGVVLGQERLKKWYEQKDWRYSGIHALAVSGTEHLYTGSGDKSIKEWSLRDYTLTCTM 360
           W I   L Q+ L+KWYE+KDWR+SGIH+L VS    LYTGSGD++IK WSL+D TL CTM
Sbjct: 606 WGIAAPLRQDPLRKWYEKKDWRFSGIHSLVVSKNHSLYTGSGDRTIKAWSLKDETLICTM 665

Query: 361 NGHKSVVSSLAVCDGVLYSGSWDGT 435
            GH+SVVS+LAVCD VLYSGSWDGT
Sbjct: 666 TGHRSVVSTLAVCDEVLYSGSWDGT 690


>ref|XP_002520315.1| F-box and wd40 domain protein, putative [Ricinus communis]
           gi|223540534|gb|EEF42101.1| F-box and wd40 domain
           protein, putative [Ricinus communis]
          Length = 1794

 Score =  215 bits (547), Expect = 3e-54
 Identities = 98/143 (68%), Positives = 117/143 (81%)
 Frame = +1

Query: 7   GGFIFGSSFDKTVHVWSLQNFSHVQSFVSHEHRVMSVVFVNATEPLCISGDSGSGICVWS 186
           GGF+F SSFDK+V VWSLQ+ S + +F  HEH+VM+V++V+  +PLCISGD+G GI +WS
Sbjct: 523 GGFLFSSSFDKSVRVWSLQDLSPLHTFKGHEHKVMAVIYVDEEQPLCISGDAGGGIFLWS 582

Query: 187 IGVVLGQERLKKWYEQKDWRYSGIHALAVSGTEHLYTGSGDKSIKEWSLRDYTLTCTMNG 366
           I   L QE LK WYEQKDWRYSGIHAL  +G  +LYTGSGD+S+K WSLRD  L+CTM+G
Sbjct: 583 INHPLRQESLKNWYEQKDWRYSGIHALTTAGNGYLYTGSGDRSVKAWSLRDGILSCTMDG 642

Query: 367 HKSVVSSLAVCDGVLYSGSWDGT 435
           HKSVVSSLA  DGVLYSGSWDGT
Sbjct: 643 HKSVVSSLAASDGVLYSGSWDGT 665


>ref|XP_004161204.1| PREDICTED: uncharacterized LOC101212974, partial [Cucumis sativus]
          Length = 741

 Score =  206 bits (524), Expect = 2e-51
 Identities = 89/144 (61%), Positives = 115/144 (79%)
 Frame = +1

Query: 1   VGGGFIFGSSFDKTVHVWSLQNFSHVQSFVSHEHRVMSVVFVNATEPLCISGDSGSGICV 180
           +GG ++F SS+DKTV  WSLQ+FSHV +F+ HEHR+M +V+++  +PLC+S D G GI V
Sbjct: 551 IGGDYLFSSSYDKTVQAWSLQDFSHVHTFIGHEHRIMDLVYIDEEQPLCVSADIGGGIYV 610

Query: 181 WSIGVVLGQERLKKWYEQKDWRYSGIHALAVSGTEHLYTGSGDKSIKEWSLRDYTLTCTM 360
           WS+ + L Q+ LKKWYE+KDWRY GIHALA S   +LYTG GDK +KEWSL+D TL+ +M
Sbjct: 611 WSVALPLKQDPLKKWYEEKDWRYDGIHALAYSSNGYLYTGGGDKLVKEWSLKDGTLSGSM 670

Query: 361 NGHKSVVSSLAVCDGVLYSGSWDG 432
           +GHKSVVS+L   +GVLYSGSWDG
Sbjct: 671 HGHKSVVSALVASNGVLYSGSWDG 694


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