BLASTX nr result

ID: Coptis24_contig00019063 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019063
         (387 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305421.1| predicted protein [Populus trichocarpa] gi|2...   149   2e-34
ref|XP_003631634.1| PREDICTED: nogo-B receptor-like isoform 1 [V...   149   3e-34
gb|ACG31553.1| hypothetical protein [Zea mays]                        148   5e-34
tpg|DAA43979.1| TPA: hypothetical protein ZEAMMB73_876715 [Zea m...   147   7e-34
gb|ACR35501.1| unknown [Zea mays] gi|414865421|tpg|DAA43978.1| T...   147   7e-34

>ref|XP_002305421.1| predicted protein [Populus trichocarpa] gi|222848385|gb|EEE85932.1|
           predicted protein [Populus trichocarpa]
          Length = 254

 Score =  149 bits (376), Expect = 2e-34
 Identities = 72/111 (64%), Positives = 87/111 (78%), Gaps = 6/111 (5%)
 Frame = -3

Query: 385 EFLSISDGKEGTAKAASHLCTKYLEVSD------EPTFTEESMGEALRAVGCGGPQPNLL 224
           EF SISDGKE  AK  + L  KY +V++      E  FTE +M EALRAVGCGGP+P+LL
Sbjct: 144 EFASISDGKEAVAKGGNVLFMKYSKVANSGAEQKEQIFTEANMTEALRAVGCGGPEPDLL 203

Query: 223 LVYGPVRCHLGFPAWRMRYTEIVHMGPLKSMKHGTLVKTVHKFAKVQQNYG 71
           LVYGP RCHLGFPAWR+RYTEIVHMGPLKS+++G+LVK ++KF  V+Q YG
Sbjct: 204 LVYGPARCHLGFPAWRIRYTEIVHMGPLKSVRYGSLVKAIYKFTIVRQKYG 254


>ref|XP_003631634.1| PREDICTED: nogo-B receptor-like isoform 1 [Vitis vinifera]
           gi|359475284|ref|XP_003631635.1| PREDICTED: nogo-B
           receptor-like isoform 2 [Vitis vinifera]
           gi|297741434|emb|CBI32565.3| unnamed protein product
           [Vitis vinifera]
          Length = 255

 Score =  149 bits (375), Expect = 3e-34
 Identities = 71/111 (63%), Positives = 85/111 (76%), Gaps = 6/111 (5%)
 Frame = -3

Query: 385 EFLSISDGKEGTAKAASHLCTKYLEVSD------EPTFTEESMGEALRAVGCGGPQPNLL 224
           EF SISDGK    KAA+ L  KYL+ +D      E  FTE  M EAL+AVGC GP P+LL
Sbjct: 144 EFASISDGKGAVTKAANILFMKYLKSADSGGSSAESIFTEPHMAEALKAVGCRGPDPDLL 203

Query: 223 LVYGPVRCHLGFPAWRMRYTEIVHMGPLKSMKHGTLVKTVHKFAKVQQNYG 71
           L+YGP RCHLGFPAWR+RYTEI+HMGPLKSMK+G+L+K ++KF+ V QNYG
Sbjct: 204 LIYGPARCHLGFPAWRIRYTEIIHMGPLKSMKYGSLLKAIYKFSMVHQNYG 254


>gb|ACG31553.1| hypothetical protein [Zea mays]
          Length = 273

 Score =  148 bits (373), Expect = 5e-34
 Identities = 70/110 (63%), Positives = 85/110 (77%), Gaps = 6/110 (5%)
 Frame = -3

Query: 379 LSISDGKEGTAKAASHLCTKYL------EVSDEPTFTEESMGEALRAVGCGGPQPNLLLV 218
           LS SDGKEG AKAAS LC+ Y       +   +P FTE  M  AL+AVGCGGP+P+LLL+
Sbjct: 164 LSGSDGKEGIAKAASLLCSTYFNGDTHGDGKRKPAFTEADMAAALKAVGCGGPEPDLLLM 223

Query: 217 YGPVRCHLGFPAWRMRYTEIVHMGPLKSMKHGTLVKTVHKFAKVQQNYGK 68
           YGP RCHLGFPAWR+RYTEI++MGPLKSMK+G +VK ++ F+K  QNYGK
Sbjct: 224 YGPARCHLGFPAWRLRYTEIMYMGPLKSMKYGAIVKALYNFSKKHQNYGK 273


>tpg|DAA43979.1| TPA: hypothetical protein ZEAMMB73_876715 [Zea mays]
          Length = 337

 Score =  147 bits (372), Expect = 7e-34
 Identities = 70/110 (63%), Positives = 85/110 (77%), Gaps = 6/110 (5%)
 Frame = -3

Query: 379 LSISDGKEGTAKAASHLCTKYL------EVSDEPTFTEESMGEALRAVGCGGPQPNLLLV 218
           LS SDGKEG AKAAS LC+ YL      +   +P FTE  M  AL+AVGCGGP+P+LLL+
Sbjct: 228 LSGSDGKEGIAKAASLLCSTYLNGDTHGDDKRKPAFTEADMAGALKAVGCGGPEPDLLLM 287

Query: 217 YGPVRCHLGFPAWRMRYTEIVHMGPLKSMKHGTLVKTVHKFAKVQQNYGK 68
           YGP RCHLGFP WR+RYTEI++MGPLKSMK+G +VK ++ F+K  QNYGK
Sbjct: 288 YGPARCHLGFPTWRLRYTEIMYMGPLKSMKYGAIVKALYNFSKKHQNYGK 337


>gb|ACR35501.1| unknown [Zea mays] gi|414865421|tpg|DAA43978.1| TPA: hypothetical
           protein ZEAMMB73_876715 [Zea mays]
          Length = 302

 Score =  147 bits (372), Expect = 7e-34
 Identities = 70/110 (63%), Positives = 85/110 (77%), Gaps = 6/110 (5%)
 Frame = -3

Query: 379 LSISDGKEGTAKAASHLCTKYL------EVSDEPTFTEESMGEALRAVGCGGPQPNLLLV 218
           LS SDGKEG AKAAS LC+ YL      +   +P FTE  M  AL+AVGCGGP+P+LLL+
Sbjct: 193 LSGSDGKEGIAKAASLLCSTYLNGDTHGDDKRKPAFTEADMAGALKAVGCGGPEPDLLLM 252

Query: 217 YGPVRCHLGFPAWRMRYTEIVHMGPLKSMKHGTLVKTVHKFAKVQQNYGK 68
           YGP RCHLGFP WR+RYTEI++MGPLKSMK+G +VK ++ F+K  QNYGK
Sbjct: 253 YGPARCHLGFPTWRLRYTEIMYMGPLKSMKYGAIVKALYNFSKKHQNYGK 302


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