BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019055
         (803 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003546075.1| PREDICTED: F-box protein SKIP19-like [Glycin...   162   6e-38
ref|XP_003541669.1| PREDICTED: F-box protein SKIP19-like [Glycin...   158   2e-36
ref|XP_003593882.1| F-box protein SKIP19 [Medicago truncatula] g...   154   2e-35
ref|XP_004134625.1| PREDICTED: F-box protein SKIP19-like [Cucumi...   154   3e-35
ref|XP_004134904.1| PREDICTED: putative F-box/LRR-repeat protein...   151   1e-34

>ref|XP_003546075.1| PREDICTED: F-box protein SKIP19-like [Glycine max]
          Length = 318

 Score =  162 bits (411), Expect = 6e-38
 Identities = 99/218 (45%), Positives = 132/218 (60%), Gaps = 9/218 (4%)
 Frame = -3

Query: 627 RNWLDLPKDVMLAIFMKLTAYEILFTAQRVCSSWRKLAKEPQLFRSIAIRHLWRCFRSNN 448
           RNWLDLP+DV+  IF KL A EIL  AQRVCS WR ++KEP L+R+I +R+      +N 
Sbjct: 18  RNWLDLPRDVVCTIFQKLGAIEILTRAQRVCSVWRGISKEPLLWRTIDMRNSGD-IETNF 76

Query: 447 GALRFTKELVDRSCRQLTDFSYDGDKSEMILRYVAHRTNMLKSLQINCCRFISDGALIKA 268
             L      +D S   L   + +   ++ +LR++ H T+ L+SL++ CC  ISD  L + 
Sbjct: 77  VFLAMCHRAIDYSSGHLLHINIEYFATDDLLRHITHSTSNLRSLRLACCYQISDEGLCEI 136

Query: 267 AGSFPLLEELVLIKYSF--SRETIKKLGRCCPKLKCLTLAFNQK-------ESRDVAFAI 115
           A   P LEEL +   SF  +R+ ++ +GRCC  LK  TL FN K       E  + AFAI
Sbjct: 137 AKELPQLEELDISISSFNPTRDPLEAVGRCCRHLK--TLKFNMKGYRRPHIECDEEAFAI 194

Query: 114 AESMPQLRRLSLTDNYLENDGLEAILEGCPYLEYLDLR 1
           AE+MP L  L L  N L N+GL AIL+GCP+LE LDLR
Sbjct: 195 AETMPTLHHLQLFGNKLTNEGLLAILDGCPHLESLDLR 232


>ref|XP_003541669.1| PREDICTED: F-box protein SKIP19-like [Glycine max]
          Length = 311

 Score =  158 bits (399), Expect = 2e-36
 Identities = 94/227 (41%), Positives = 132/227 (58%), Gaps = 7/227 (3%)
 Frame = -3

Query: 660 MKRKRQVTTCTRNWLDLPKDVMLAIFMKLTAYEILFTAQRVCSSWRKLAKEPQLFRSIAI 481
           M   ++     RNWLDLP+DV+  IF KL A EIL  AQ VCS WR ++KEP L+R+I +
Sbjct: 1   MSSSKEAAAEERNWLDLPRDVLCTIFQKLGATEILTRAQGVCSVWRAISKEPLLWRTIDM 60

Query: 480 RHLWRCFRSNNGALRFTKELVDRSCRQLTDFSYDGDKSEMILRYVAHRTNMLKSLQINCC 301
           R+L      +   L      +D S   L   + +   ++ +L ++ H T+ L+SL++ CC
Sbjct: 61  RNLGD-IGLDFHLLAMCHRAIDYSSGHLLHINVEYFGTDDLLHHITHSTSNLRSLRLACC 119

Query: 300 RFISDGALIKAAGSFPLLEELVLIKYSFSRETIKKLGRCCPKLKCLTLAFNQK------- 142
             ISD  L + A   P LEEL +   + +++ ++ +G+CCP LK  TL FN +       
Sbjct: 120 YQISDEGLCEIAEKLPQLEELDISISNLTKDPLEAIGQCCPHLK--TLKFNMEGYRRPHI 177

Query: 141 ESRDVAFAIAESMPQLRRLSLTDNYLENDGLEAILEGCPYLEYLDLR 1
           E  + AFAIAE+MP L  L L  N L N+GL AIL+GCP LE LDLR
Sbjct: 178 ECDEEAFAIAETMPGLHHLQLFGNKLTNEGLLAILDGCPLLESLDLR 224


>ref|XP_003593882.1| F-box protein SKIP19 [Medicago truncatula]
           gi|355482930|gb|AES64133.1| F-box protein SKIP19
           [Medicago truncatula]
          Length = 332

 Score =  154 bits (390), Expect = 2e-35
 Identities = 86/216 (39%), Positives = 129/216 (59%), Gaps = 7/216 (3%)
 Frame = -3

Query: 627 RNWLDLPKDVMLAIFMKLTAYEILFTAQRVCSSWRKLAKEPQLFRSIAIRHLWRCFRSNN 448
           RNWLDLP DV+L IF KL   ++L  A  VC++WRK++K+P L+ +I + ++     S+ 
Sbjct: 23  RNWLDLPSDVVLTIFRKLHTIDLLHRAHNVCTTWRKISKDPFLYHTIDMPNIGTDLSSDF 82

Query: 447 GALRFTKELVDRSCRQLTDFSYDGDKSEMILRYVAHRTNMLKSLQINCCRFISDGALIKA 268
                 +  VD S  Q TD + +   ++ +LR++A   N L+ L++  C  ++D  L + 
Sbjct: 83  YLEILCQRAVDYSSGQATDINIEYFGTDDLLRHIADSANHLQRLRLLGCYNVTDEGLCEV 142

Query: 267 AGSFPLLEELVLIKYSFSRETIKKLGRCCPKLKCLTLAFN-------QKESRDVAFAIAE 109
           AG    LEEL +  +S S + ++ +GRCCP+LK  T  FN       + E  D AF+IA+
Sbjct: 143 AGKLSHLEELDITIHSLSNDPLEAIGRCCPQLK--TFKFNIEGFRRPRMEFDDEAFSIAK 200

Query: 108 SMPQLRRLSLTDNYLENDGLEAILEGCPYLEYLDLR 1
           +MP LR L L  N +  DGL AIL+GCP+LE LD+R
Sbjct: 201 TMPGLRHLMLVGNKMSKDGLRAILDGCPHLESLDIR 236


>ref|XP_004134625.1| PREDICTED: F-box protein SKIP19-like [Cucumis sativus]
           gi|449490588|ref|XP_004158648.1| PREDICTED: F-box
           protein SKIP19-like [Cucumis sativus]
          Length = 311

 Score =  154 bits (388), Expect = 3e-35
 Identities = 91/213 (42%), Positives = 123/213 (57%), Gaps = 3/213 (1%)
 Frame = -3

Query: 630 TRNWLDLPKDVMLAIFMKLTAYEILFTAQRVCSSWRKLAKEPQLFRSIAIRHLWRCFRSN 451
           +RNWL+LP DV   I  KL   EIL  AQ VCSSWRK+ ++P ++R I +R+    +  +
Sbjct: 14  SRNWLELPVDVTSMILQKLGPVEILTYAQYVCSSWRKICEDPLMWRVIDMRYPCDWWDMD 73

Query: 450 NGALRFTKELVDRSCRQLTDFSYDGDKSEMILRYVAHRTNMLKSLQINCCRFISDGALIK 271
                  ++ V RSC QL  F+ +   ++ +L Y+    N L  L++  C  ISD  L++
Sbjct: 74  YNLEELCRQAVKRSCGQLIHFNIEHFGTDDLLLYITQSCNQLSRLRLVYCNRISDEGLVE 133

Query: 270 AAGSFPLLEELVLIKYSFSRETIKKLGRCCPKLKCLTL---AFNQKESRDVAFAIAESMP 100
           A    PLLE+L L   SF  ET++ LG+ CP LK L L    + + E    A AIAE+MP
Sbjct: 134 AVSKLPLLEDLELSFCSFDVETLETLGQNCPGLKSLKLNRQFYRRVECDKGALAIAENMP 193

Query: 99  QLRRLSLTDNYLENDGLEAILEGCPYLEYLDLR 1
            LR L +  N L N GLEAIL+GC  LE LDLR
Sbjct: 194 NLRHLHIFGNNLTNKGLEAILDGCSALESLDLR 226


>ref|XP_004134904.1| PREDICTED: putative F-box/LRR-repeat protein 23-like [Cucumis
           sativus] gi|449490717|ref|XP_004158686.1| PREDICTED:
           putative F-box/LRR-repeat protein 23-like [Cucumis
           sativus]
          Length = 318

 Score =  151 bits (382), Expect = 1e-34
 Identities = 95/215 (44%), Positives = 121/215 (56%), Gaps = 7/215 (3%)
 Frame = -3

Query: 624 NWLDLPKDVMLAIFMKLTAYEILFTAQRVCSSWRKLAKEPQLFRSIAIRHLWRCFRSNNG 445
           NWL+LP +VM  I  K+ A EI    Q VCSSWRKL  +P ++R+I +R      R N  
Sbjct: 5   NWLELPSEVMSMILQKVGAIEIFQNVQYVCSSWRKLCMDPLMWRTIDMRISGNFPRRNYY 64

Query: 444 ALRFTKELVDRSCRQLTDFSYDGDKSEMILRYVAHRTNMLKSLQINCCRFISDGALIKAA 265
                +  VD S   L D S +   ++ +L Y+A R+N LK L I  C  ISD  LIKAA
Sbjct: 65  LRAACRYGVDLSRGHLIDISIESFATDSLLLYIARRSNELKRLWIADCFCISDMGLIKAA 124

Query: 264 GSFPLLEELVLIKYSFSRETIKKLGRCCPKLKCLTLAFNQK-------ESRDVAFAIAES 106
              PLLE+L +    F   T+  +GRCCP LK L L  NQ+       E    A AIA++
Sbjct: 125 SKLPLLEQLEIFLCCFDSRTLGTVGRCCPLLKSLKL--NQQFCTGKGMECDREALAIAKT 182

Query: 105 MPQLRRLSLTDNYLENDGLEAILEGCPYLEYLDLR 1
           MP+LR L +  N L + GL+AIL GCP LE LDLR
Sbjct: 183 MPKLRHLQIFGNALTDKGLQAILNGCPDLESLDLR 217