BLASTX nr result

ID: Coptis24_contig00019048 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019048
         (1379 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271840.2| PREDICTED: ubiquitin carboxyl-terminal hydro...    58   7e-06
emb|CBI23999.3| unnamed protein product [Vitis vinifera]               58   7e-06

>ref|XP_002271840.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19-like [Vitis
            vinifera]
          Length = 940

 Score = 57.8 bits (138), Expect = 7e-06
 Identities = 79/349 (22%), Positives = 144/349 (41%), Gaps = 22/349 (6%)
 Frame = -1

Query: 1067 IEEAQPYSKSSGEYITLEGSTDSFSTMPTEV-----KSLSVESS----SNEDEPVYMNLD 915
            ++  +P+ K + + + +    +  S  P E      KS  VESS    S  +    ++  
Sbjct: 509  LKTTEPFKKENEQMVEVAQEVEPCSKQPVECFTKAEKSNHVESSRFLPSESNACSKVSNC 568

Query: 914  DPIEANSRFTSEYPAATTVDAVSDVESSPLYRAD--------GPVKVDVLVTGGDQQDLD 759
            + +   + +      +  VD ++    SP+ R +         P ++ VLV    +    
Sbjct: 569  EELSFRTNYEIVRKDSEDVDMINPELCSPVSRDNEVVDNGHSNPEEIAVLVDHTPRMVSG 628

Query: 758  LGNTESSSLSLKYLDATGLASSAEVLQGNTSIAKCSKESILKEFSVDECLSYEGEIHEMA 579
              +T   S +  +       SS++V +G  + + C  E +    S +  +  +      A
Sbjct: 629  FASTSEISSTEVHYPKCKSVSSSDVEEGGRAKSTCVDEVMSLASSTENSVPTQNGACGRA 688

Query: 578  ETSCTVPSAGSNSVTKVVQEGKPFTHT-LPNPTQEQVSRVNSLNTAPTALGAQGNAS-KL 405
            ETS  V +A  ++V   + E KP +   L     + + R       P++     +   KL
Sbjct: 689  ETSHEVSAAPRSTVKGTLDETKPVSSEGLAISFVDNLERNKWGKDVPSSSCCTDHGGGKL 748

Query: 404  VGGKHLSNGKQKPLFSRGFIDKGSRCRSPNKNGTLVKS-GEDGMSFRVSTDCNGFTKPAV 228
             G    S+ K KPLFS GF+ K  R +S  ++G   +   E   + +VS++CNG  KP  
Sbjct: 749  TGQNSSSDTKLKPLFSPGFLGKRPRNKSTKRDGKASEECHEVATAGKVSSNCNGIAKPGF 808

Query: 227  SQNIS--VVHELDGNSGIDFKPNSIIFMENQCEKNYMDVDEATGKPLSE 87
                S  + +E    S  +  P+S  F+  Q +K+ ++ DE      SE
Sbjct: 809  PHQRSGELNNEAQALSNYNNLPSS-SFVGEQPQKS-LNEDEMVSIEFSE 855


>emb|CBI23999.3| unnamed protein product [Vitis vinifera]
          Length = 892

 Score = 57.8 bits (138), Expect = 7e-06
 Identities = 79/349 (22%), Positives = 144/349 (41%), Gaps = 22/349 (6%)
 Frame = -1

Query: 1067 IEEAQPYSKSSGEYITLEGSTDSFSTMPTEV-----KSLSVESS----SNEDEPVYMNLD 915
            ++  +P+ K + + + +    +  S  P E      KS  VESS    S  +    ++  
Sbjct: 433  LKTTEPFKKENEQMVEVAQEVEPCSKQPVECFTKAEKSNHVESSRFLPSESNACSKVSNC 492

Query: 914  DPIEANSRFTSEYPAATTVDAVSDVESSPLYRAD--------GPVKVDVLVTGGDQQDLD 759
            + +   + +      +  VD ++    SP+ R +         P ++ VLV    +    
Sbjct: 493  EELSFRTNYEIVRKDSEDVDMINPELCSPVSRDNEVVDNGHSNPEEIAVLVDHTPRMVSG 552

Query: 758  LGNTESSSLSLKYLDATGLASSAEVLQGNTSIAKCSKESILKEFSVDECLSYEGEIHEMA 579
              +T   S +  +       SS++V +G  + + C  E +    S +  +  +      A
Sbjct: 553  FASTSEISSTEVHYPKCKSVSSSDVEEGGRAKSTCVDEVMSLASSTENSVPTQNGACGRA 612

Query: 578  ETSCTVPSAGSNSVTKVVQEGKPFTHT-LPNPTQEQVSRVNSLNTAPTALGAQGNAS-KL 405
            ETS  V +A  ++V   + E KP +   L     + + R       P++     +   KL
Sbjct: 613  ETSHEVSAAPRSTVKGTLDETKPVSSEGLAISFVDNLERNKWGKDVPSSSCCTDHGGGKL 672

Query: 404  VGGKHLSNGKQKPLFSRGFIDKGSRCRSPNKNGTLVKS-GEDGMSFRVSTDCNGFTKPAV 228
             G    S+ K KPLFS GF+ K  R +S  ++G   +   E   + +VS++CNG  KP  
Sbjct: 673  TGQNSSSDTKLKPLFSPGFLGKRPRNKSTKRDGKASEECHEVATAGKVSSNCNGIAKPGF 732

Query: 227  SQNIS--VVHELDGNSGIDFKPNSIIFMENQCEKNYMDVDEATGKPLSE 87
                S  + +E    S  +  P+S  F+  Q +K+ ++ DE      SE
Sbjct: 733  PHQRSGELNNEAQALSNYNNLPSS-SFVGEQPQKS-LNEDEMVSIEFSE 779


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