BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019043
         (967 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK26796.1| unknown [Picea sitchensis]                             347   2e-93
ref|XP_003581445.1| PREDICTED: ATP-dependent Clp protease proteo...   338   1e-90
gb|ABK23566.1| unknown [Picea sitchensis]                             338   1e-90
ref|NP_001147355.1| ATP-dependent Clp protease proteolytic subun...   336   4e-90
dbj|BAK00210.1| predicted protein [Hordeum vulgare subsp. vulgare]    336   6e-90

>gb|ABK26796.1| unknown [Picea sitchensis]
          Length = 248

 Score =  347 bits (890), Expect = 2e-93
 Identities = 175/209 (83%), Positives = 190/209 (90%)
 Frame = -2

Query: 822 PMVIEHTSRGERAYDIFSRLLKERIICINGPIADDTAAVVVAQLLFLESENPSKPISMYI 643
           PMVIEHTSRGERAYDIFSRLLKERIICINGPIAD+TA+VVVAQLLFLESENP KPI+MYI
Sbjct: 39  PMVIEHTSRGERAYDIFSRLLKERIICINGPIADETASVVVAQLLFLESENPQKPINMYI 98

Query: 642 NSPGGAVTAGLAIYDTMQYIRSPVSTLCIGQAASMGSLLLTAGAKGERRALPNARVMIHQ 463
           NSPGG VTAGLAIYDTMQYI+SPV+TLCIGQAASMGSLLL AG+ GERRALPNARVMIHQ
Sbjct: 99  NSPGGVVTAGLAIYDTMQYIKSPVTTLCIGQAASMGSLLLAAGSHGERRALPNARVMIHQ 158

Query: 462 PSGGASGQASDIAIQAKEILKVREKLNLLYTKHTGKEIELIEKSMDRDMFMSPEEAKDFG 283
           PSGGASGQASDIAI AKEILK RE+LN LY KHTG+ IE IE+ M+RD FMSP+EAK+FG
Sbjct: 159 PSGGASGQASDIAIHAKEILKTRERLNGLYAKHTGQTIEKIEQFMERDTFMSPDEAKEFG 218

Query: 282 LIDEVIEHRPLGLVTDSVGDGEKGKDETS 196
           LIDEVIEHRP+ LVTDSV D +K   + S
Sbjct: 219 LIDEVIEHRPISLVTDSVTDDKKNNKDVS 247


>ref|XP_003581445.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 2,
           mitochondrial-like [Brachypodium distachyon]
          Length = 300

 Score =  338 bits (866), Expect = 1e-90
 Identities = 175/221 (79%), Positives = 192/221 (86%), Gaps = 11/221 (4%)
 Frame = -2

Query: 822 PMVIEHTSRGERAYDIFSRLLKERIICINGPIADDTAAVVVAQLLFLESENPSKPISMYI 643
           PMVIEHTSRGERAYDIFSRLLKERI+CI+GPIADDTA++VVAQLLFLESENP+KPI +YI
Sbjct: 79  PMVIEHTSRGERAYDIFSRLLKERIVCIHGPIADDTASLVVAQLLFLESENPAKPIHLYI 138

Query: 642 NSPGGAVTAGLAIYDTMQYIRSPVSTLCIGQAASMGSLLLTAGAKGERRALPNARVMIHQ 463
           NSPGG VTAGLAIYDTMQYIRSPV+TLCIGQAASMGSLLL AGA GERRALPNARVMIHQ
Sbjct: 139 NSPGGVVTAGLAIYDTMQYIRSPVTTLCIGQAASMGSLLLAAGAPGERRALPNARVMIHQ 198

Query: 462 PSGGASGQASDIAIQAKEILKVREKLNLLYTKHTGKEIELIEKSMDRDMFMSPEEAKDFG 283
           PSGGASGQASDIAI AKEILKVR++LN +Y KHTG+ IE IEK M+RDMFM P EA  +G
Sbjct: 199 PSGGASGQASDIAIHAKEILKVRDRLNKIYAKHTGQAIESIEKCMERDMFMDPVEAHSWG 258

Query: 282 LIDEVIEHRPLGLVTDSV----------GDGE-KGKDETSP 193
           LIDEVIEHRP+ LV+D+V          G GE KG +E SP
Sbjct: 259 LIDEVIEHRPVSLVSDAVASDPPSTGGAGGGENKGTEEPSP 299


>gb|ABK23566.1| unknown [Picea sitchensis]
          Length = 243

 Score =  338 bits (866), Expect = 1e-90
 Identities = 169/200 (84%), Positives = 184/200 (92%)
 Frame = -2

Query: 822 PMVIEHTSRGERAYDIFSRLLKERIICINGPIADDTAAVVVAQLLFLESENPSKPISMYI 643
           PMVIE TSRGERAYDIFSRLLKERIICING I DDTAAVVVAQLLFLESENP+KPI++YI
Sbjct: 35  PMVIEQTSRGERAYDIFSRLLKERIICINGVIEDDTAAVVVAQLLFLESENPAKPINLYI 94

Query: 642 NSPGGAVTAGLAIYDTMQYIRSPVSTLCIGQAASMGSLLLTAGAKGERRALPNARVMIHQ 463
           NSPGG VTAGLAIYDTMQYIRSPVST C+GQAASMGSLLL AGAKGERR+LPNAR+MIHQ
Sbjct: 95  NSPGGVVTAGLAIYDTMQYIRSPVSTFCMGQAASMGSLLLAAGAKGERRSLPNARIMIHQ 154

Query: 462 PSGGASGQASDIAIQAKEILKVREKLNLLYTKHTGKEIELIEKSMDRDMFMSPEEAKDFG 283
           PSGGASGQASDIAIQAKEIL  R++LN LY KHTG+ I+ IEK M+RDMFMSPEEAK+FG
Sbjct: 155 PSGGASGQASDIAIQAKEILLTRDRLNSLYAKHTGQSIDKIEKCMERDMFMSPEEAKEFG 214

Query: 282 LIDEVIEHRPLGLVTDSVGD 223
           L+D VIE RP+ LVTD+VGD
Sbjct: 215 LVDTVIEQRPMSLVTDAVGD 234


>ref|NP_001147355.1| ATP-dependent Clp protease proteolytic subunit [Zea mays]
           gi|194700894|gb|ACF84531.1| unknown [Zea mays]
           gi|195610476|gb|ACG27068.1| ATP-dependent Clp protease
           proteolytic subunit [Zea mays]
           gi|413918966|gb|AFW58898.1| ATP-dependent Clp protease
           proteolytic subunit isoform 1 [Zea mays]
           gi|413918967|gb|AFW58899.1| ATP-dependent Clp protease
           proteolytic subunit isoform 2 [Zea mays]
          Length = 260

 Score =  336 bits (862), Expect = 4e-90
 Identities = 170/221 (76%), Positives = 191/221 (86%), Gaps = 11/221 (4%)
 Frame = -2

Query: 822 PMVIEHTSRGERAYDIFSRLLKERIICINGPIADDTAAVVVAQLLFLESENPSKPISMYI 643
           PMVIEHTSRGERAYDIFSRLLKERI+CI+GPI DDTA++VVAQLLFLESENP+KP+ +YI
Sbjct: 39  PMVIEHTSRGERAYDIFSRLLKERIVCIHGPITDDTASLVVAQLLFLESENPAKPVHLYI 98

Query: 642 NSPGGAVTAGLAIYDTMQYIRSPVSTLCIGQAASMGSLLLTAGAKGERRALPNARVMIHQ 463
           NSPGG VTAGLAIYDTMQYIRSPV+TLCIGQAASM SLLL AGA GERRALPNARVMIHQ
Sbjct: 99  NSPGGVVTAGLAIYDTMQYIRSPVTTLCIGQAASMASLLLAAGASGERRALPNARVMIHQ 158

Query: 462 PSGGASGQASDIAIQAKEILKVREKLNLLYTKHTGKEIELIEKSMDRDMFMSPEEAKDFG 283
           PSGGASGQASDIAI AKEILKVR++LN +Y KHTG+ I+ IE+ M+RDMFM PEEA ++G
Sbjct: 159 PSGGASGQASDIAIHAKEILKVRDRLNKIYAKHTGQAIDRIEQCMERDMFMDPEEAHEWG 218

Query: 282 LIDEVIEHRPLGLVTDSVG-----------DGEKGKDETSP 193
           LIDEVIEHRP+ LV+D+VG           +  KG DE SP
Sbjct: 219 LIDEVIEHRPVSLVSDAVGSDPPNLGGGGTEVNKGTDEPSP 259


>dbj|BAK00210.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 256

 Score =  336 bits (861), Expect = 6e-90
 Identities = 174/223 (78%), Positives = 193/223 (86%), Gaps = 13/223 (5%)
 Frame = -2

Query: 822 PMVIEHTSRGERAYDIFSRLLKERIICINGPIADDTAAVVVAQLLFLESENPSKPISMYI 643
           PMVIEHTSRGERAYDIFSRLLKERI+CI+GPIADDTA++VVAQLLFLESENP+KPI +YI
Sbjct: 33  PMVIEHTSRGERAYDIFSRLLKERIVCIHGPIADDTASLVVAQLLFLESENPAKPIHLYI 92

Query: 642 NSPGGAVTAGLAIYDTMQYIRSPVSTLCIGQAASMGSLLLTAGAKGERRALPNARVMIHQ 463
           NSPGG VTAGLAIYDTMQYIRSPV+TLCIGQAASMGSLLL AGA GERRALPNARVMIHQ
Sbjct: 93  NSPGGVVTAGLAIYDTMQYIRSPVTTLCIGQAASMGSLLLAAGAPGERRALPNARVMIHQ 152

Query: 462 PSGGASGQASDIAIQAKEILKVREKLNLLYTKHTGKEIELIEKSMDRDMFMSPEEAKDFG 283
           PSGGASGQASDIAIQAKEILKVR++LN +Y KHTG+ I+ IE+ M+RDMFM P EA  +G
Sbjct: 153 PSGGASGQASDIAIQAKEILKVRDRLNKIYAKHTGQAIDRIEQCMERDMFMDPVEAHAWG 212

Query: 282 LIDEVIEHRPLGLVTDSV------------GDGE-KGKDETSP 193
           LIDEVIEHRP+ LV+D+V            G GE KG +E SP
Sbjct: 213 LIDEVIEHRPISLVSDAVSSDPPNVSGGGSGGGESKGTEEPSP 255