BLASTX nr result
ID: Coptis24_contig00019043
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00019043 (967 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABK26796.1| unknown [Picea sitchensis] 347 2e-93 ref|XP_003581445.1| PREDICTED: ATP-dependent Clp protease proteo... 338 1e-90 gb|ABK23566.1| unknown [Picea sitchensis] 338 1e-90 ref|NP_001147355.1| ATP-dependent Clp protease proteolytic subun... 336 4e-90 dbj|BAK00210.1| predicted protein [Hordeum vulgare subsp. vulgare] 336 6e-90 >gb|ABK26796.1| unknown [Picea sitchensis] Length = 248 Score = 347 bits (890), Expect = 2e-93 Identities = 175/209 (83%), Positives = 190/209 (90%) Frame = -2 Query: 822 PMVIEHTSRGERAYDIFSRLLKERIICINGPIADDTAAVVVAQLLFLESENPSKPISMYI 643 PMVIEHTSRGERAYDIFSRLLKERIICINGPIAD+TA+VVVAQLLFLESENP KPI+MYI Sbjct: 39 PMVIEHTSRGERAYDIFSRLLKERIICINGPIADETASVVVAQLLFLESENPQKPINMYI 98 Query: 642 NSPGGAVTAGLAIYDTMQYIRSPVSTLCIGQAASMGSLLLTAGAKGERRALPNARVMIHQ 463 NSPGG VTAGLAIYDTMQYI+SPV+TLCIGQAASMGSLLL AG+ GERRALPNARVMIHQ Sbjct: 99 NSPGGVVTAGLAIYDTMQYIKSPVTTLCIGQAASMGSLLLAAGSHGERRALPNARVMIHQ 158 Query: 462 PSGGASGQASDIAIQAKEILKVREKLNLLYTKHTGKEIELIEKSMDRDMFMSPEEAKDFG 283 PSGGASGQASDIAI AKEILK RE+LN LY KHTG+ IE IE+ M+RD FMSP+EAK+FG Sbjct: 159 PSGGASGQASDIAIHAKEILKTRERLNGLYAKHTGQTIEKIEQFMERDTFMSPDEAKEFG 218 Query: 282 LIDEVIEHRPLGLVTDSVGDGEKGKDETS 196 LIDEVIEHRP+ LVTDSV D +K + S Sbjct: 219 LIDEVIEHRPISLVTDSVTDDKKNNKDVS 247 >ref|XP_003581445.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 2, mitochondrial-like [Brachypodium distachyon] Length = 300 Score = 338 bits (866), Expect = 1e-90 Identities = 175/221 (79%), Positives = 192/221 (86%), Gaps = 11/221 (4%) Frame = -2 Query: 822 PMVIEHTSRGERAYDIFSRLLKERIICINGPIADDTAAVVVAQLLFLESENPSKPISMYI 643 PMVIEHTSRGERAYDIFSRLLKERI+CI+GPIADDTA++VVAQLLFLESENP+KPI +YI Sbjct: 79 PMVIEHTSRGERAYDIFSRLLKERIVCIHGPIADDTASLVVAQLLFLESENPAKPIHLYI 138 Query: 642 NSPGGAVTAGLAIYDTMQYIRSPVSTLCIGQAASMGSLLLTAGAKGERRALPNARVMIHQ 463 NSPGG VTAGLAIYDTMQYIRSPV+TLCIGQAASMGSLLL AGA GERRALPNARVMIHQ Sbjct: 139 NSPGGVVTAGLAIYDTMQYIRSPVTTLCIGQAASMGSLLLAAGAPGERRALPNARVMIHQ 198 Query: 462 PSGGASGQASDIAIQAKEILKVREKLNLLYTKHTGKEIELIEKSMDRDMFMSPEEAKDFG 283 PSGGASGQASDIAI AKEILKVR++LN +Y KHTG+ IE IEK M+RDMFM P EA +G Sbjct: 199 PSGGASGQASDIAIHAKEILKVRDRLNKIYAKHTGQAIESIEKCMERDMFMDPVEAHSWG 258 Query: 282 LIDEVIEHRPLGLVTDSV----------GDGE-KGKDETSP 193 LIDEVIEHRP+ LV+D+V G GE KG +E SP Sbjct: 259 LIDEVIEHRPVSLVSDAVASDPPSTGGAGGGENKGTEEPSP 299 >gb|ABK23566.1| unknown [Picea sitchensis] Length = 243 Score = 338 bits (866), Expect = 1e-90 Identities = 169/200 (84%), Positives = 184/200 (92%) Frame = -2 Query: 822 PMVIEHTSRGERAYDIFSRLLKERIICINGPIADDTAAVVVAQLLFLESENPSKPISMYI 643 PMVIE TSRGERAYDIFSRLLKERIICING I DDTAAVVVAQLLFLESENP+KPI++YI Sbjct: 35 PMVIEQTSRGERAYDIFSRLLKERIICINGVIEDDTAAVVVAQLLFLESENPAKPINLYI 94 Query: 642 NSPGGAVTAGLAIYDTMQYIRSPVSTLCIGQAASMGSLLLTAGAKGERRALPNARVMIHQ 463 NSPGG VTAGLAIYDTMQYIRSPVST C+GQAASMGSLLL AGAKGERR+LPNAR+MIHQ Sbjct: 95 NSPGGVVTAGLAIYDTMQYIRSPVSTFCMGQAASMGSLLLAAGAKGERRSLPNARIMIHQ 154 Query: 462 PSGGASGQASDIAIQAKEILKVREKLNLLYTKHTGKEIELIEKSMDRDMFMSPEEAKDFG 283 PSGGASGQASDIAIQAKEIL R++LN LY KHTG+ I+ IEK M+RDMFMSPEEAK+FG Sbjct: 155 PSGGASGQASDIAIQAKEILLTRDRLNSLYAKHTGQSIDKIEKCMERDMFMSPEEAKEFG 214 Query: 282 LIDEVIEHRPLGLVTDSVGD 223 L+D VIE RP+ LVTD+VGD Sbjct: 215 LVDTVIEQRPMSLVTDAVGD 234 >ref|NP_001147355.1| ATP-dependent Clp protease proteolytic subunit [Zea mays] gi|194700894|gb|ACF84531.1| unknown [Zea mays] gi|195610476|gb|ACG27068.1| ATP-dependent Clp protease proteolytic subunit [Zea mays] gi|413918966|gb|AFW58898.1| ATP-dependent Clp protease proteolytic subunit isoform 1 [Zea mays] gi|413918967|gb|AFW58899.1| ATP-dependent Clp protease proteolytic subunit isoform 2 [Zea mays] Length = 260 Score = 336 bits (862), Expect = 4e-90 Identities = 170/221 (76%), Positives = 191/221 (86%), Gaps = 11/221 (4%) Frame = -2 Query: 822 PMVIEHTSRGERAYDIFSRLLKERIICINGPIADDTAAVVVAQLLFLESENPSKPISMYI 643 PMVIEHTSRGERAYDIFSRLLKERI+CI+GPI DDTA++VVAQLLFLESENP+KP+ +YI Sbjct: 39 PMVIEHTSRGERAYDIFSRLLKERIVCIHGPITDDTASLVVAQLLFLESENPAKPVHLYI 98 Query: 642 NSPGGAVTAGLAIYDTMQYIRSPVSTLCIGQAASMGSLLLTAGAKGERRALPNARVMIHQ 463 NSPGG VTAGLAIYDTMQYIRSPV+TLCIGQAASM SLLL AGA GERRALPNARVMIHQ Sbjct: 99 NSPGGVVTAGLAIYDTMQYIRSPVTTLCIGQAASMASLLLAAGASGERRALPNARVMIHQ 158 Query: 462 PSGGASGQASDIAIQAKEILKVREKLNLLYTKHTGKEIELIEKSMDRDMFMSPEEAKDFG 283 PSGGASGQASDIAI AKEILKVR++LN +Y KHTG+ I+ IE+ M+RDMFM PEEA ++G Sbjct: 159 PSGGASGQASDIAIHAKEILKVRDRLNKIYAKHTGQAIDRIEQCMERDMFMDPEEAHEWG 218 Query: 282 LIDEVIEHRPLGLVTDSVG-----------DGEKGKDETSP 193 LIDEVIEHRP+ LV+D+VG + KG DE SP Sbjct: 219 LIDEVIEHRPVSLVSDAVGSDPPNLGGGGTEVNKGTDEPSP 259 >dbj|BAK00210.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 256 Score = 336 bits (861), Expect = 6e-90 Identities = 174/223 (78%), Positives = 193/223 (86%), Gaps = 13/223 (5%) Frame = -2 Query: 822 PMVIEHTSRGERAYDIFSRLLKERIICINGPIADDTAAVVVAQLLFLESENPSKPISMYI 643 PMVIEHTSRGERAYDIFSRLLKERI+CI+GPIADDTA++VVAQLLFLESENP+KPI +YI Sbjct: 33 PMVIEHTSRGERAYDIFSRLLKERIVCIHGPIADDTASLVVAQLLFLESENPAKPIHLYI 92 Query: 642 NSPGGAVTAGLAIYDTMQYIRSPVSTLCIGQAASMGSLLLTAGAKGERRALPNARVMIHQ 463 NSPGG VTAGLAIYDTMQYIRSPV+TLCIGQAASMGSLLL AGA GERRALPNARVMIHQ Sbjct: 93 NSPGGVVTAGLAIYDTMQYIRSPVTTLCIGQAASMGSLLLAAGAPGERRALPNARVMIHQ 152 Query: 462 PSGGASGQASDIAIQAKEILKVREKLNLLYTKHTGKEIELIEKSMDRDMFMSPEEAKDFG 283 PSGGASGQASDIAIQAKEILKVR++LN +Y KHTG+ I+ IE+ M+RDMFM P EA +G Sbjct: 153 PSGGASGQASDIAIQAKEILKVRDRLNKIYAKHTGQAIDRIEQCMERDMFMDPVEAHAWG 212 Query: 282 LIDEVIEHRPLGLVTDSV------------GDGE-KGKDETSP 193 LIDEVIEHRP+ LV+D+V G GE KG +E SP Sbjct: 213 LIDEVIEHRPISLVSDAVSSDPPNVSGGGSGGGESKGTEEPSP 255