BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019042
         (997 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283507.1| PREDICTED: E3 ubiquitin-protein ligase RHA2A...   194   2e-47
ref|XP_002312419.1| predicted protein [Populus trichocarpa] gi|2...   162   1e-37
ref|XP_003536661.1| PREDICTED: E3 ubiquitin-protein ligase RHA2A...   155   2e-35
ref|XP_002314830.1| predicted protein [Populus trichocarpa] gi|2...   155   2e-35
ref|XP_003638419.1| RING finger protein [Medicago truncatula] gi...   149   1e-33

>ref|XP_002283507.1| PREDICTED: E3 ubiquitin-protein ligase RHA2A-like [Vitis vinifera]
          Length = 162

 Score =  194 bits (494), Expect = 2e-47
 Identities = 106/172 (61%), Positives = 125/172 (72%), Gaps = 2/172 (1%)
 Frame = -1

Query: 784 MGLYSSLNDASPESIPLFLVIFIANCVNYLRSLMFGIVQVMGFSRFYSLGDAVATE-GLF 608
           MGL S LND S +SIPL LV  IANCV Y+RSL+ G+ Q MG SRF    DA   E GL 
Sbjct: 1   MGLQSQLNDVSSDSIPLLLVAIIANCVAYIRSLLLGLFQSMGLSRF----DADEVEDGLL 56

Query: 607 SAMSSGLARLIMVSEQSNNMSGVFCYK-SEDRVAESTYSDNCVVCLCRLKDGEQVRSLAC 431
            A+ SGLA LI+++EQ N ++ VF Y+  ED  A S    +CVVCLCRL+DG+QVR LAC
Sbjct: 57  GAVGSGLASLIVLAEQLN-LNRVFSYRYGEDGGAAS----DCVVCLCRLRDGDQVRRLAC 111

Query: 430 RHVFHKTCLDGWVFDHLNVTCPLCRSPLVSEERFKVAQRQVAGDLVTWFSMR 275
           RHVFHK C DGW+ DHLN  CPLCRSPLVS+ER  + QR+V GDLVTWFS+R
Sbjct: 112 RHVFHKECFDGWL-DHLNFNCPLCRSPLVSDERVALTQRRVGGDLVTWFSLR 162


>ref|XP_002312419.1| predicted protein [Populus trichocarpa] gi|222852239|gb|EEE89786.1|
           predicted protein [Populus trichocarpa]
          Length = 168

 Score =  162 bits (410), Expect = 1e-37
 Identities = 90/173 (52%), Positives = 111/173 (64%), Gaps = 3/173 (1%)
 Frame = -1

Query: 784 MGLYSSLNDASPESIPLFLVIFIANCVNYLRSLMFGIVQVMGFSRFYSLGDAVATEGLFS 605
           MGL + LND S ESIPL L+ FIANCV  LRS  F +   +G  R       V  + L  
Sbjct: 1   MGLQNQLNDVSSESIPLLLIAFIANCVACLRSFFFSVFHSVGVHRLDQAH--VMDDRLMG 58

Query: 604 AMSSGLARLIMVSEQSNNMSGVFCYK---SEDRVAESTYSDNCVVCLCRLKDGEQVRSLA 434
           +M SGLA LI+++EQ   ++ VF YK     D   +   SD CVVCLC L+DG+QVR L 
Sbjct: 59  SMGSGLAGLIVLAEQ-RKLNRVFAYKYCCGRDDGNDKGGSD-CVVCLCTLRDGDQVRKLD 116

Query: 433 CRHVFHKTCLDGWVFDHLNVTCPLCRSPLVSEERFKVAQRQVAGDLVTWFSMR 275
           CRHVFHK C DGW+ DHLN  CPLCR PLVS+ER +  +R+V  +LV WFS+R
Sbjct: 117 CRHVFHKECFDGWL-DHLNFNCPLCRWPLVSDERVEETRRRVGENLVEWFSLR 168


>ref|XP_003536661.1| PREDICTED: E3 ubiquitin-protein ligase RHA2A-like [Glycine max]
          Length = 169

 Score =  155 bits (391), Expect = 2e-35
 Identities = 79/171 (46%), Positives = 107/171 (62%), Gaps = 2/171 (1%)
 Frame = -1

Query: 784 MGLYSSLNDASPESIPLFLVIFIANCVNYLRSLMFGIVQVMGFSRFYSLGDAVATEGLFS 605
           MGL + LND S  SIPL ++  IA CVNYLRS++F ++Q +G SRF+S  D +  E   +
Sbjct: 1   MGLQNQLNDVSSGSIPLLVLAQIATCVNYLRSMLFALLQTLGLSRFHS--DQIVDERFLA 58

Query: 604 AMSSGLARLIMVSEQSNNMSGVFCYKSEDRVAESTYSDN--CVVCLCRLKDGEQVRSLAC 431
           A+ SGLA LIM+S+Q    S  F +            D+  CVVC    +DG+QVR L C
Sbjct: 59  AVGSGLAGLIMLSDQLTLSSQFFHHHHGTAAGHDHDHDHHPCVVCQATFEDGDQVRMLPC 118

Query: 430 RHVFHKTCLDGWVFDHLNVTCPLCRSPLVSEERFKVAQRQVAGDLVTWFSM 278
           RHVFH+ C DGW+  H    CPLCRSPL S+ER  + +R++   L++WFS+
Sbjct: 119 RHVFHRRCFDGWL-HHYKFNCPLCRSPLFSDERVALTERRLGQQLISWFSL 168


>ref|XP_002314830.1| predicted protein [Populus trichocarpa] gi|222863870|gb|EEF01001.1|
           predicted protein [Populus trichocarpa]
          Length = 169

 Score =  155 bits (391), Expect = 2e-35
 Identities = 83/173 (47%), Positives = 106/173 (61%), Gaps = 3/173 (1%)
 Frame = -1

Query: 784 MGLYSSLNDASPESIPLFLVIFIANCVNYLRSLMFGIVQVMGFSRFYSLGDAVATEGLFS 605
           MGL + LND S ESIPL L+  IANCV  LRS +F +   +G  R       V  +GL  
Sbjct: 1   MGLQNQLNDVSSESIPLLLIALIANCVACLRSFLFSVFHSVGLHRLDQAH--VMDDGLLG 58

Query: 604 AMSSGLARLIMVSEQSNNMSGVFCYK---SEDRVAESTYSDNCVVCLCRLKDGEQVRSLA 434
           ++ SG A LI+++EQ   ++ VF YK     D         +CVVCLC L+ G+QVR L 
Sbjct: 59  SIGSGFAGLIVLAEQ-RKLNRVFSYKYCCGGDSNTNDKGGSDCVVCLCTLRHGDQVRRLD 117

Query: 433 CRHVFHKTCLDGWVFDHLNVTCPLCRSPLVSEERFKVAQRQVAGDLVTWFSMR 275
           C HVFHK C DGW+ DHLN  CPLCR PLVS+ER +  +R+V  D+V W S+R
Sbjct: 118 CCHVFHKECFDGWL-DHLNFNCPLCRWPLVSDERVEETRRRVGADVVDWLSLR 169


>ref|XP_003638419.1| RING finger protein [Medicago truncatula]
           gi|355504354|gb|AES85557.1| RING finger protein
           [Medicago truncatula] gi|388513305|gb|AFK44714.1|
           unknown [Medicago truncatula]
          Length = 164

 Score =  149 bits (376), Expect = 1e-33
 Identities = 76/170 (44%), Positives = 109/170 (64%)
 Frame = -1

Query: 784 MGLYSSLNDASPESIPLFLVIFIANCVNYLRSLMFGIVQVMGFSRFYSLGDAVATEGLFS 605
           MGL S LND S +SIPL +++ IA CVNY+RS++   +Q +G SR  +  D +  +   +
Sbjct: 1   MGLQSQLNDVSSDSIPLLVLMHIATCVNYIRSMLLNFLQSIGLSRLQT--DQIVDDHFIA 58

Query: 604 AMSSGLARLIMVSEQSNNMSGVFCYKSEDRVAESTYSDNCVVCLCRLKDGEQVRSLACRH 425
           A+ SGLA LIM+S+Q  +++  F YK ED  A S  +  CV C    ++G+ VR L CRH
Sbjct: 59  AVGSGLAGLIMLSDQL-SLNNQFFYKYED--AASADNHRCVFCQSNFENGDHVRKLPCRH 115

Query: 424 VFHKTCLDGWVFDHLNVTCPLCRSPLVSEERFKVAQRQVAGDLVTWFSMR 275
           VFH+ CL+GW F   N  CPLCR  L S+ER  + +R+V   L++WF++R
Sbjct: 116 VFHRHCLNGW-FHRFNFNCPLCRCSLHSDERVALTERRVGSQLISWFTLR 164