BLASTX nr result
ID: Coptis24_contig00019042
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00019042 (997 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002283507.1| PREDICTED: E3 ubiquitin-protein ligase RHA2A... 194 2e-47 ref|XP_002312419.1| predicted protein [Populus trichocarpa] gi|2... 162 1e-37 ref|XP_003536661.1| PREDICTED: E3 ubiquitin-protein ligase RHA2A... 155 2e-35 ref|XP_002314830.1| predicted protein [Populus trichocarpa] gi|2... 155 2e-35 ref|XP_003638419.1| RING finger protein [Medicago truncatula] gi... 149 1e-33 >ref|XP_002283507.1| PREDICTED: E3 ubiquitin-protein ligase RHA2A-like [Vitis vinifera] Length = 162 Score = 194 bits (494), Expect = 2e-47 Identities = 106/172 (61%), Positives = 125/172 (72%), Gaps = 2/172 (1%) Frame = -1 Query: 784 MGLYSSLNDASPESIPLFLVIFIANCVNYLRSLMFGIVQVMGFSRFYSLGDAVATE-GLF 608 MGL S LND S +SIPL LV IANCV Y+RSL+ G+ Q MG SRF DA E GL Sbjct: 1 MGLQSQLNDVSSDSIPLLLVAIIANCVAYIRSLLLGLFQSMGLSRF----DADEVEDGLL 56 Query: 607 SAMSSGLARLIMVSEQSNNMSGVFCYK-SEDRVAESTYSDNCVVCLCRLKDGEQVRSLAC 431 A+ SGLA LI+++EQ N ++ VF Y+ ED A S +CVVCLCRL+DG+QVR LAC Sbjct: 57 GAVGSGLASLIVLAEQLN-LNRVFSYRYGEDGGAAS----DCVVCLCRLRDGDQVRRLAC 111 Query: 430 RHVFHKTCLDGWVFDHLNVTCPLCRSPLVSEERFKVAQRQVAGDLVTWFSMR 275 RHVFHK C DGW+ DHLN CPLCRSPLVS+ER + QR+V GDLVTWFS+R Sbjct: 112 RHVFHKECFDGWL-DHLNFNCPLCRSPLVSDERVALTQRRVGGDLVTWFSLR 162 >ref|XP_002312419.1| predicted protein [Populus trichocarpa] gi|222852239|gb|EEE89786.1| predicted protein [Populus trichocarpa] Length = 168 Score = 162 bits (410), Expect = 1e-37 Identities = 90/173 (52%), Positives = 111/173 (64%), Gaps = 3/173 (1%) Frame = -1 Query: 784 MGLYSSLNDASPESIPLFLVIFIANCVNYLRSLMFGIVQVMGFSRFYSLGDAVATEGLFS 605 MGL + LND S ESIPL L+ FIANCV LRS F + +G R V + L Sbjct: 1 MGLQNQLNDVSSESIPLLLIAFIANCVACLRSFFFSVFHSVGVHRLDQAH--VMDDRLMG 58 Query: 604 AMSSGLARLIMVSEQSNNMSGVFCYK---SEDRVAESTYSDNCVVCLCRLKDGEQVRSLA 434 +M SGLA LI+++EQ ++ VF YK D + SD CVVCLC L+DG+QVR L Sbjct: 59 SMGSGLAGLIVLAEQ-RKLNRVFAYKYCCGRDDGNDKGGSD-CVVCLCTLRDGDQVRKLD 116 Query: 433 CRHVFHKTCLDGWVFDHLNVTCPLCRSPLVSEERFKVAQRQVAGDLVTWFSMR 275 CRHVFHK C DGW+ DHLN CPLCR PLVS+ER + +R+V +LV WFS+R Sbjct: 117 CRHVFHKECFDGWL-DHLNFNCPLCRWPLVSDERVEETRRRVGENLVEWFSLR 168 >ref|XP_003536661.1| PREDICTED: E3 ubiquitin-protein ligase RHA2A-like [Glycine max] Length = 169 Score = 155 bits (391), Expect = 2e-35 Identities = 79/171 (46%), Positives = 107/171 (62%), Gaps = 2/171 (1%) Frame = -1 Query: 784 MGLYSSLNDASPESIPLFLVIFIANCVNYLRSLMFGIVQVMGFSRFYSLGDAVATEGLFS 605 MGL + LND S SIPL ++ IA CVNYLRS++F ++Q +G SRF+S D + E + Sbjct: 1 MGLQNQLNDVSSGSIPLLVLAQIATCVNYLRSMLFALLQTLGLSRFHS--DQIVDERFLA 58 Query: 604 AMSSGLARLIMVSEQSNNMSGVFCYKSEDRVAESTYSDN--CVVCLCRLKDGEQVRSLAC 431 A+ SGLA LIM+S+Q S F + D+ CVVC +DG+QVR L C Sbjct: 59 AVGSGLAGLIMLSDQLTLSSQFFHHHHGTAAGHDHDHDHHPCVVCQATFEDGDQVRMLPC 118 Query: 430 RHVFHKTCLDGWVFDHLNVTCPLCRSPLVSEERFKVAQRQVAGDLVTWFSM 278 RHVFH+ C DGW+ H CPLCRSPL S+ER + +R++ L++WFS+ Sbjct: 119 RHVFHRRCFDGWL-HHYKFNCPLCRSPLFSDERVALTERRLGQQLISWFSL 168 >ref|XP_002314830.1| predicted protein [Populus trichocarpa] gi|222863870|gb|EEF01001.1| predicted protein [Populus trichocarpa] Length = 169 Score = 155 bits (391), Expect = 2e-35 Identities = 83/173 (47%), Positives = 106/173 (61%), Gaps = 3/173 (1%) Frame = -1 Query: 784 MGLYSSLNDASPESIPLFLVIFIANCVNYLRSLMFGIVQVMGFSRFYSLGDAVATEGLFS 605 MGL + LND S ESIPL L+ IANCV LRS +F + +G R V +GL Sbjct: 1 MGLQNQLNDVSSESIPLLLIALIANCVACLRSFLFSVFHSVGLHRLDQAH--VMDDGLLG 58 Query: 604 AMSSGLARLIMVSEQSNNMSGVFCYK---SEDRVAESTYSDNCVVCLCRLKDGEQVRSLA 434 ++ SG A LI+++EQ ++ VF YK D +CVVCLC L+ G+QVR L Sbjct: 59 SIGSGFAGLIVLAEQ-RKLNRVFSYKYCCGGDSNTNDKGGSDCVVCLCTLRHGDQVRRLD 117 Query: 433 CRHVFHKTCLDGWVFDHLNVTCPLCRSPLVSEERFKVAQRQVAGDLVTWFSMR 275 C HVFHK C DGW+ DHLN CPLCR PLVS+ER + +R+V D+V W S+R Sbjct: 118 CCHVFHKECFDGWL-DHLNFNCPLCRWPLVSDERVEETRRRVGADVVDWLSLR 169 >ref|XP_003638419.1| RING finger protein [Medicago truncatula] gi|355504354|gb|AES85557.1| RING finger protein [Medicago truncatula] gi|388513305|gb|AFK44714.1| unknown [Medicago truncatula] Length = 164 Score = 149 bits (376), Expect = 1e-33 Identities = 76/170 (44%), Positives = 109/170 (64%) Frame = -1 Query: 784 MGLYSSLNDASPESIPLFLVIFIANCVNYLRSLMFGIVQVMGFSRFYSLGDAVATEGLFS 605 MGL S LND S +SIPL +++ IA CVNY+RS++ +Q +G SR + D + + + Sbjct: 1 MGLQSQLNDVSSDSIPLLVLMHIATCVNYIRSMLLNFLQSIGLSRLQT--DQIVDDHFIA 58 Query: 604 AMSSGLARLIMVSEQSNNMSGVFCYKSEDRVAESTYSDNCVVCLCRLKDGEQVRSLACRH 425 A+ SGLA LIM+S+Q +++ F YK ED A S + CV C ++G+ VR L CRH Sbjct: 59 AVGSGLAGLIMLSDQL-SLNNQFFYKYED--AASADNHRCVFCQSNFENGDHVRKLPCRH 115 Query: 424 VFHKTCLDGWVFDHLNVTCPLCRSPLVSEERFKVAQRQVAGDLVTWFSMR 275 VFH+ CL+GW F N CPLCR L S+ER + +R+V L++WF++R Sbjct: 116 VFHRHCLNGW-FHRFNFNCPLCRCSLHSDERVALTERRVGSQLISWFTLR 164