BLASTX nr result

ID: Coptis24_contig00019039 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019039
         (997 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40561.3| unnamed protein product [Vitis vinifera]              136   9e-30
ref|XP_002263925.2| PREDICTED: uncharacterized protein LOC100258...   125   1e-26
emb|CAN64660.1| hypothetical protein VITISV_009615 [Vitis vinifera]   125   1e-26
ref|XP_004134301.1| PREDICTED: uncharacterized protein LOC101205...   123   6e-26
ref|XP_002516668.1| transcription factor, putative [Ricinus comm...   122   2e-25

>emb|CBI40561.3| unnamed protein product [Vitis vinifera]
          Length = 897

 Score =  136 bits (342), Expect = 9e-30
 Identities = 85/253 (33%), Positives = 122/253 (48%), Gaps = 4/253 (1%)
 Frame = -1

Query: 751 WRCSQMALPGKSICQKHQMQHENXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 572
           WRCS+ A  GKS C+KH +Q +N                                     
Sbjct: 16  WRCSETASKGKSYCEKHCLQIKNQSERKKREREEGKISGSGEFAGGGGGERTGEKRRRRK 75

Query: 571 XXLIENNVSVGEELVLVGDLKTVKQLVKSKDCRGGKKELVSYGEFSSKFGEVERKITRNV 392
               + +    +   LV DL+    + K KD R  +   ++  +  S  G        N 
Sbjct: 76  ESDSDGS---DDNSTLVKDLRKRHPITK-KD-RVNRIVDINSDKIESNCG--------NG 122

Query: 391 YAKLGGEGRLATEEKETTKK---DHDSKNKEQKRLMCHQCLRSDKAGIIYCSNCKRKRYC 221
            A+ GG  R +TE++  +     D  +KNKE   LMCHQC R+DK+G+++CS+C RKRYC
Sbjct: 123 KAESGGGQRSSTEDQSKSGSRISDKLNKNKEHGSLMCHQCQRNDKSGVVHCSSCTRKRYC 182

Query: 220 HDCITKWYPGKAFEEVRTACPYCRGHCNCKACLDGEIYVGKNWK-AGGNVKLQRXXXXXX 44
            +CI KWYP K  +E+ +ACP+C G+CNCKACL   ++V  N K    +VKLQR      
Sbjct: 183 FECIAKWYPEKTRDEIESACPFCCGNCNCKACLREVLFVKANHKELDDSVKLQRLQYLLF 242

Query: 43  XXXXLVRQIHSEQ 5
               ++R +H EQ
Sbjct: 243 KALPVLRHVHQEQ 255


>ref|XP_002263925.2| PREDICTED: uncharacterized protein LOC100258626 [Vitis vinifera]
          Length = 1035

 Score =  125 bits (315), Expect = 1e-26
 Identities = 55/111 (49%), Positives = 75/111 (67%), Gaps = 1/111 (0%)
 Frame = -1

Query: 334 KDHDSKNKEQKRLMCHQCLRSDKAGIIYCSNCKRKRYCHDCITKWYPGKAFEEVRTACPY 155
           +D  +KNKE   LMCHQC R+DK+G+++CS+C RKRYC +CI KWYP K  +E+ +ACP+
Sbjct: 169 QDKLNKNKEHGSLMCHQCQRNDKSGVVHCSSCTRKRYCFECIAKWYPEKTRDEIESACPF 228

Query: 154 CRGHCNCKACLDGEIYVGKNWK-AGGNVKLQRXXXXXXXXXXLVRQIHSEQ 5
           C G+CNCKACL   ++V  N K    +VKLQR          ++R +H EQ
Sbjct: 229 CCGNCNCKACLREVLFVKANHKELDDSVKLQRLQYLLFKALPVLRHVHQEQ 279


>emb|CAN64660.1| hypothetical protein VITISV_009615 [Vitis vinifera]
          Length = 1160

 Score =  125 bits (315), Expect = 1e-26
 Identities = 55/111 (49%), Positives = 75/111 (67%), Gaps = 1/111 (0%)
 Frame = -1

Query: 334 KDHDSKNKEQKRLMCHQCLRSDKAGIIYCSNCKRKRYCHDCITKWYPGKAFEEVRTACPY 155
           +D  +KNKE   LMCHQC R+DK+G+++CS+C RKRYC +CI KWYP K  +E+ +ACP+
Sbjct: 169 QDKLNKNKEHGSLMCHQCQRNDKSGVVHCSSCTRKRYCFECIAKWYPEKTRDEIESACPF 228

Query: 154 CRGHCNCKACLDGEIYVGKNWK-AGGNVKLQRXXXXXXXXXXLVRQIHSEQ 5
           C G+CNCKACL   ++V  N K    +VKLQR          ++R +H EQ
Sbjct: 229 CCGNCNCKACLREVLFVKANHKELDDSVKLQRLQYLLFKALPVLRHVHQEQ 279


>ref|XP_004134301.1| PREDICTED: uncharacterized protein LOC101205548 [Cucumis sativus]
          Length = 993

 Score =  123 bits (309), Expect = 6e-26
 Identities = 84/281 (29%), Positives = 120/281 (42%), Gaps = 22/281 (7%)
 Frame = -1

Query: 778 QCSRTGTPFWRCSQMALPGKSICQKH--QMQHENXXXXXXXXXXXXXXXXXXXXXXXXXX 605
           +C R     WRC ++A PGKS C +H  Q+  +N                          
Sbjct: 8   RCKRNDGARWRCKELASPGKSYCDRHLIQLMKQNLNYKVRNYGDRGLCSGGRVMEEAGKR 67

Query: 604 XXXXXXXXXXXXXLIENNVSVGEELVLVGDLKTVKQLVK-------------SKDCR--- 473
                              S+GEE     +L   + LV+             SKD +   
Sbjct: 68  NEVRPRFG-----------SLGEESA--DELDRNRSLVRKQKRQLCNRENNFSKDAKIGR 114

Query: 472 -GGKKELVSYGEFSSKFGEVERKITRNVYAKLGGEGRLATEEKETTKKDHDSKNKEQKR- 299
             GK EL +       F   + K T +   +LG   +       T  K  ++    +K  
Sbjct: 115 DSGKSELTA-------FKLSDGKDTADSVKRLGASAKRKRNHVVTNGKSVETDKPNKKNG 167

Query: 298 --LMCHQCLRSDKAGIIYCSNCKRKRYCHDCITKWYPGKAFEEVRTACPYCRGHCNCKAC 125
             LMCHQCLRSD +G+++CSNC+RKR+C+ CI +WYP K  E+V  ACP CRGHCNCKAC
Sbjct: 168 GSLMCHQCLRSDTSGVVFCSNCQRKRFCYKCIERWYPDKTREDVENACPCCRGHCNCKAC 227

Query: 124 LDGEIYVGKNWKAGGNVKLQRXXXXXXXXXXLVRQIHSEQN 2
           L   +      +   +VK++R          ++R I  EQ+
Sbjct: 228 LREFVEFAPK-ELDASVKVERLKFLLHKVLPILRHIQREQS 267


>ref|XP_002516668.1| transcription factor, putative [Ricinus communis]
           gi|223544163|gb|EEF45687.1| transcription factor,
           putative [Ricinus communis]
          Length = 939

 Score =  122 bits (305), Expect = 2e-25
 Identities = 54/112 (48%), Positives = 72/112 (64%), Gaps = 2/112 (1%)
 Frame = -1

Query: 331 DHDSKNKEQKRLMCHQCLRSDKAGIIYCSNCKRKRYCHDCITKWYPGKAFEEVRTACPYC 152
           D+    K Q+ LMCHQC +SD+ G++ CSNC+RKRYC+DC+ KWYP K +E++  ACP+C
Sbjct: 149 DNTESKKVQRNLMCHQCWKSDRNGVVICSNCRRKRYCYDCLAKWYPEKTWEQIEIACPFC 208

Query: 151 RGHCNCKACL--DGEIYVGKNWKAGGNVKLQRXXXXXXXXXXLVRQIHSEQN 2
           RG+CNC+ CL  D    VG N +A  N KLQ           L+R I  EQ+
Sbjct: 209 RGNCNCRLCLKEDAVALVG-NTEADKNTKLQNFLYLLYKTLPLLRHIQQEQS 259


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