BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019037
         (572 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containi...   100   2e-19
ref|XP_002515418.1| pentatricopeptide repeat-containing protein,...    93   3e-17
ref|XP_002308709.1| predicted protein [Populus trichocarpa] gi|2...    93   3e-17
ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    84   2e-14
ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containi...    84   2e-14

>ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
            chloroplastic [Vitis vinifera]
            gi|296082142|emb|CBI21147.3| unnamed protein product
            [Vitis vinifera]
          Length = 1113

 Score =  100 bits (249), Expect = 2e-19
 Identities = 45/49 (91%), Positives = 48/49 (97%)
 Frame = +2

Query: 2    KPNVFTYNALIRGYSMSGNPDRAYAIYKKMMVGGCTPNTGTFAQLPNQS 148
            +PNVFTYNALIRG+SMSGNPDRAYA+YKKMMVGGC PNTGTFAQLPNQS
Sbjct: 1065 EPNVFTYNALIRGHSMSGNPDRAYAVYKKMMVGGCRPNTGTFAQLPNQS 1113


>ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223545362|gb|EEF46867.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 1113

 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 41/47 (87%), Positives = 45/47 (95%)
 Frame = +2

Query: 2    KPNVFTYNALIRGYSMSGNPDRAYAIYKKMMVGGCTPNTGTFAQLPN 142
            +PNVFTYNALIRGYSMSGN D AYA+YK+MMVGGC+PNTGTFAQLPN
Sbjct: 1067 EPNVFTYNALIRGYSMSGNSDSAYAVYKRMMVGGCSPNTGTFAQLPN 1113


>ref|XP_002308709.1| predicted protein [Populus trichocarpa] gi|222854685|gb|EEE92232.1|
            predicted protein [Populus trichocarpa]
          Length = 1115

 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 42/49 (85%), Positives = 45/49 (91%)
 Frame = +2

Query: 2    KPNVFTYNALIRGYSMSGNPDRAYAIYKKMMVGGCTPNTGTFAQLPNQS 148
            KPNVFTYNALIRGY++SGN + AY IYKKMMVGGC PNTGTFAQLPNQS
Sbjct: 1067 KPNVFTYNALIRGYTLSGNSELAYGIYKKMMVGGCDPNTGTFAQLPNQS 1115


>ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At4g31850, chloroplastic-like [Cucumis sativus]
          Length = 1113

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 36/49 (73%), Positives = 42/49 (85%)
 Frame = +2

Query: 2    KPNVFTYNALIRGYSMSGNPDRAYAIYKKMMVGGCTPNTGTFAQLPNQS 148
            +P+VFTYNALIRGYS+S NP+ AY +YK MMV GC PN GT+AQLPNQS
Sbjct: 1065 EPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQLPNQS 1113


>ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
            chloroplastic-like [Cucumis sativus]
          Length = 1113

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 36/49 (73%), Positives = 42/49 (85%)
 Frame = +2

Query: 2    KPNVFTYNALIRGYSMSGNPDRAYAIYKKMMVGGCTPNTGTFAQLPNQS 148
            +P+VFTYNALIRGYS+S NP+ AY +YK MMV GC PN GT+AQLPNQS
Sbjct: 1065 EPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQLPNQS 1113