BLASTX nr result
ID: Coptis24_contig00019033
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00019033 (281 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002281382.2| PREDICTED: zinc finger Ran-binding domain-co... 55 3e-07 emb|CBI15155.3| unnamed protein product [Vitis vinifera] 55 3e-07 ref|NP_001060181.2| Os07g0598300 [Oryza sativa Japonica Group] g... 56 4e-07 dbj|BAC83216.1| putative DNA helicase [Oryza sativa Japonica Group] 56 4e-07 gb|EEC82393.1| hypothetical protein OsI_26740 [Oryza sativa Indi... 57 6e-07 >ref|XP_002281382.2| PREDICTED: zinc finger Ran-binding domain-containing protein 3-like [Vitis vinifera] Length = 1280 Score = 55.1 bits (131), Expect(2) = 3e-07 Identities = 30/67 (44%), Positives = 45/67 (67%) Frame = -2 Query: 280 IRRLKEHLLVQLPPKRRQIVSLVLERSDINMAVSAMKEGDTSSIEN*QETEPMANDCSSE 101 IRRLKEH+L +LPPKRRQI+ L+L+R+DI+ A++A + + EN +A + S+ Sbjct: 427 IRRLKEHVLGELPPKRRQIIRLLLKRADIDFAIAATRVTKCDASEN-----NVAEEKPSD 481 Query: 100 DDDDVSG 80 + D SG Sbjct: 482 NKPDDSG 488 Score = 24.3 bits (51), Expect(2) = 3e-07 Identities = 11/23 (47%), Positives = 16/23 (69%) Frame = -1 Query: 71 SVSESDDECGCPKSSRELSNQEL 3 S ++ DD G SS++LSNQ+L Sbjct: 480 SDNKPDDSGGAHSSSKKLSNQQL 502 >emb|CBI15155.3| unnamed protein product [Vitis vinifera] Length = 1201 Score = 55.1 bits (131), Expect(2) = 3e-07 Identities = 30/67 (44%), Positives = 45/67 (67%) Frame = -2 Query: 280 IRRLKEHLLVQLPPKRRQIVSLVLERSDINMAVSAMKEGDTSSIEN*QETEPMANDCSSE 101 IRRLKEH+L +LPPKRRQI+ L+L+R+DI+ A++A + + EN +A + S+ Sbjct: 429 IRRLKEHVLGELPPKRRQIIRLLLKRADIDFAIAATRVTKCDASEN-----NVAEEKPSD 483 Query: 100 DDDDVSG 80 + D SG Sbjct: 484 NKPDDSG 490 Score = 24.3 bits (51), Expect(2) = 3e-07 Identities = 11/23 (47%), Positives = 16/23 (69%) Frame = -1 Query: 71 SVSESDDECGCPKSSRELSNQEL 3 S ++ DD G SS++LSNQ+L Sbjct: 482 SDNKPDDSGGAHSSSKKLSNQQL 504 >ref|NP_001060181.2| Os07g0598300 [Oryza sativa Japonica Group] gi|255677946|dbj|BAF22095.2| Os07g0598300, partial [Oryza sativa Japonica Group] Length = 1158 Score = 55.8 bits (133), Expect(2) = 4e-07 Identities = 32/66 (48%), Positives = 43/66 (65%) Frame = -2 Query: 280 IRRLKEHLLVQLPPKRRQIVSLVLERSDINMAVSAMKEGDTSSIEN*QETEPMANDCSSE 101 IRRLKEHLL +LPPKRRQI+ L L SDI A+S +K +TS E +A+ +S Sbjct: 412 IRRLKEHLLNELPPKRRQIIWLKLNASDIKTAISCIKGVNTS-----DEIPTIASPDNSN 466 Query: 100 DDDDVS 83 D ++V+ Sbjct: 467 DSEEVN 472 Score = 22.7 bits (47), Expect(2) = 4e-07 Identities = 11/26 (42%), Positives = 16/26 (61%) Frame = -1 Query: 80 DSRSVSESDDECGCPKSSRELSNQEL 3 DS V+ + + GC KS R L+ QE+ Sbjct: 467 DSEEVNMEEAD-GCKKSPRNLTTQEI 491 >dbj|BAC83216.1| putative DNA helicase [Oryza sativa Japonica Group] Length = 1029 Score = 55.8 bits (133), Expect(2) = 4e-07 Identities = 32/66 (48%), Positives = 43/66 (65%) Frame = -2 Query: 280 IRRLKEHLLVQLPPKRRQIVSLVLERSDINMAVSAMKEGDTSSIEN*QETEPMANDCSSE 101 IRRLKEHLL +LPPKRRQI+ L L SDI A+S +K +TS E +A+ +S Sbjct: 283 IRRLKEHLLNELPPKRRQIIWLKLNASDIKTAISCIKGVNTS-----DEIPTIASPDNSN 337 Query: 100 DDDDVS 83 D ++V+ Sbjct: 338 DSEEVN 343 Score = 22.7 bits (47), Expect(2) = 4e-07 Identities = 11/26 (42%), Positives = 16/26 (61%) Frame = -1 Query: 80 DSRSVSESDDECGCPKSSRELSNQEL 3 DS V+ + + GC KS R L+ QE+ Sbjct: 338 DSEEVNMEEAD-GCKKSPRNLTTQEI 362 >gb|EEC82393.1| hypothetical protein OsI_26740 [Oryza sativa Indica Group] Length = 1165 Score = 56.6 bits (135), Expect(2) = 6e-07 Identities = 32/66 (48%), Positives = 43/66 (65%) Frame = -2 Query: 280 IRRLKEHLLVQLPPKRRQIVSLVLERSDINMAVSAMKEGDTSSIEN*QETEPMANDCSSE 101 IRRLKEHLL +LPPKRRQI+ L L SDI A+S +K +TS E +A+ +S Sbjct: 420 IRRLKEHLLNELPPKRRQIIRLKLNASDIKTAISCIKGVNTS-----DEIPTIASPDNSN 474 Query: 100 DDDDVS 83 D ++V+ Sbjct: 475 DSEEVN 480 Score = 21.6 bits (44), Expect(2) = 6e-07 Identities = 8/14 (57%), Positives = 10/14 (71%) Frame = -1 Query: 44 GCPKSSRELSNQEL 3 GC KS R L+ QE+ Sbjct: 514 GCKKSPRNLTTQEI 527