BLASTX nr result

ID: Coptis24_contig00019025 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019025
         (293 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16830.3| unnamed protein product [Vitis vinifera]              117   1e-24
ref|XP_002282104.1| PREDICTED: putative 1-aminocyclopropane-1-ca...   117   1e-24
emb|CAN65633.1| hypothetical protein VITISV_007118 [Vitis vinifera]   117   1e-24
ref|XP_003537554.1| PREDICTED: putative 1-aminocyclopropane-1-ca...   103   1e-20
ref|XP_002515044.1| trytophan synthase alpha subunit, putative [...   101   7e-20

>emb|CBI16830.3| unnamed protein product [Vitis vinifera]
          Length = 488

 Score =  117 bits (293), Expect = 1e-24
 Identities = 59/89 (66%), Positives = 71/89 (79%), Gaps = 4/89 (4%)
 Frame = +3

Query: 3   GLKSHLLLRGEQPDIPTGYNLISTIYGNTVYVPRSLYAKREEMLFKHAELVAGSNGSVIC 182
           GLKSHLLLRGE+P+I TGYNLIST+YGN  YVPRSLYAKREEML +HA+LVAG++GSV+ 
Sbjct: 164 GLKSHLLLRGERPEILTGYNLISTLYGNVKYVPRSLYAKREEMLTRHADLVAGNSGSVVW 223

Query: 183 FSDILSTCFTRKKFKEENRV----HMNVD 257
           F+D+L T FT +   + N V    HMN D
Sbjct: 224 FNDLLETSFTTQTSGKPNLVQIDAHMNAD 252


>ref|XP_002282104.1| PREDICTED: putative 1-aminocyclopropane-1-carboxylate
           deaminase-like [Vitis vinifera]
          Length = 455

 Score =  117 bits (293), Expect = 1e-24
 Identities = 59/89 (66%), Positives = 71/89 (79%), Gaps = 4/89 (4%)
 Frame = +3

Query: 3   GLKSHLLLRGEQPDIPTGYNLISTIYGNTVYVPRSLYAKREEMLFKHAELVAGSNGSVIC 182
           GLKSHLLLRGE+P+I TGYNLIST+YGN  YVPRSLYAKREEML +HA+LVAG++GSV+ 
Sbjct: 164 GLKSHLLLRGERPEILTGYNLISTLYGNVKYVPRSLYAKREEMLTRHADLVAGNSGSVVW 223

Query: 183 FSDILSTCFTRKKFKEENRV----HMNVD 257
           F+D+L T FT +   + N V    HMN D
Sbjct: 224 FNDLLETSFTTQTSGKPNLVQIDAHMNAD 252


>emb|CAN65633.1| hypothetical protein VITISV_007118 [Vitis vinifera]
          Length = 480

 Score =  117 bits (293), Expect = 1e-24
 Identities = 59/89 (66%), Positives = 71/89 (79%), Gaps = 4/89 (4%)
 Frame = +3

Query: 3   GLKSHLLLRGEQPDIPTGYNLISTIYGNTVYVPRSLYAKREEMLFKHAELVAGSNGSVIC 182
           GLKSHLLLRGE+P+I TGYNLIST+YGN  YVPRSLYAKREEML +HA+LVAG++GSV+ 
Sbjct: 56  GLKSHLLLRGERPEILTGYNLISTLYGNVKYVPRSLYAKREEMLTRHADLVAGNSGSVVW 115

Query: 183 FSDILSTCFTRKKFKEENRV----HMNVD 257
           F+D+L T FT +   + N V    HMN D
Sbjct: 116 FNDLLETSFTTQTSGKPNLVQIDAHMNAD 144


>ref|XP_003537554.1| PREDICTED: putative 1-aminocyclopropane-1-carboxylate
           deaminase-like [Glycine max]
          Length = 432

 Score =  103 bits (258), Expect = 1e-20
 Identities = 50/88 (56%), Positives = 66/88 (75%)
 Frame = +3

Query: 3   GLKSHLLLRGEQPDIPTGYNLISTIYGNTVYVPRSLYAKREEMLFKHAELVAGSNGSVIC 182
           G+ SHLLLRGEQP+I TGYNL+ST+YGN  YVPR++YA REEML  +AE VAG++GSV+ 
Sbjct: 141 GIVSHLLLRGEQPEILTGYNLMSTMYGNVTYVPRTVYANREEMLKSYAESVAGNDGSVLW 200

Query: 183 FSDILSTCFTRKKFKEENRVHMNVDKSE 266
           F DI+      + F + N + M+V +SE
Sbjct: 201 FGDIVQASSATELFTDPNFMQMDVSRSE 228


>ref|XP_002515044.1| trytophan synthase alpha subunit, putative [Ricinus communis]
           gi|223546095|gb|EEF47598.1| trytophan synthase alpha
           subunit, putative [Ricinus communis]
          Length = 442

 Score =  101 bits (251), Expect = 7e-20
 Identities = 50/87 (57%), Positives = 63/87 (72%)
 Frame = +3

Query: 3   GLKSHLLLRGEQPDIPTGYNLISTIYGNTVYVPRSLYAKREEMLFKHAELVAGSNGSVIC 182
           GLKSHLLLRGEQP++ TGYNLIS++YG   YVPR LYA RE ML  HA+LVAG+NG V+ 
Sbjct: 155 GLKSHLLLRGEQPEVLTGYNLISSVYGKVTYVPRHLYAHRESMLKIHADLVAGNNGQVLW 214

Query: 183 FSDILSTCFTRKKFKEENRVHMNVDKS 263
            +DIL T FT + +   +   M+  K+
Sbjct: 215 CNDILETIFTSQTYSSLDMRTMDACKN 241


Top