BLASTX nr result
ID: Coptis24_contig00019012
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00019012
(763 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAH66110.1| OSIGBa0115D20.3 [Oryza sativa Indica Group] gi|1... 71 3e-11
emb|CAE01302.2| OSJNBa0020P07.19 [Oryza sativa Japonica Group] 70 5e-11
gb|ABA98519.1| hAT family dimerisation domain containing protein... 67 4e-09
ref|NP_001060325.2| Os07g0624100 [Oryza sativa Japonica Group] g... 54 1e-08
gb|ABA18109.1| hAT-like transposase [Arabidopsis arenosa] 60 4e-07
>emb|CAH66110.1| OSIGBa0115D20.3 [Oryza sativa Indica Group]
gi|116317932|emb|CAH65955.1| H0716A07.13 [Oryza sativa
Indica Group]
Length = 653
Score = 71.2 bits (173), Expect(2) = 3e-11
Identities = 45/178 (25%), Positives = 86/178 (48%), Gaps = 29/178 (16%)
Frame = -2
Query: 606 SKYKTDPSYASIIGSMKSKITKYLDEIPVARSRIAACMDPRHKVSFLEVYFKIIYGYDRP 427
S ++TD + ++ +M++K KY ++ +A + +A +DP +K S +E Y IYG +
Sbjct: 366 SFFRTDGTIKTMANAMQTKYDKYWEKSNMALA-VACFLDPHYKTSSIEYYGMKIYGLEAA 424
Query: 426 GRF------------------------RSDEMH*RTFIM----ITNKNR-*EVFQWNRLT 334
+F + EMH + + N N ++F N +
Sbjct: 425 EKFDEFNGVIKKLFDVYATSACATSKKKGAEMHVHQLQIQSDPVHNTNEFDDIFNENDSS 484
Query: 333 KEGDPTFSTFAMRKRASSQSNASELQWYLDQPILKTNNREAFDVLGWWKARQVNYPVL 160
++ + F F + + S+ +ELQ Y++QP+L +++ FD+L WWK +Q +P+L
Sbjct: 485 QDHEQHFQRFLLERSQPICSDKTELQIYMEQPLLLWTSKDTFDILSWWKLKQAEFPIL 542
Score = 23.1 bits (48), Expect(2) = 3e-11
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -3
Query: 746 PTVLDWKNAAVMRDILKVFYESS 678
PT +DW A + LK F+E++
Sbjct: 331 PTKVDWSMAIALCKCLKPFHEAT 353
>emb|CAE01302.2| OSJNBa0020P07.19 [Oryza sativa Japonica Group]
Length = 741
Score = 70.5 bits (171), Expect(2) = 5e-11
Identities = 45/178 (25%), Positives = 86/178 (48%), Gaps = 29/178 (16%)
Frame = -2
Query: 606 SKYKTDPSYASIIGSMKSKITKYLDEIPVARSRIAACMDPRHKVSFLEVYFKIIYGYDRP 427
S ++TD + ++ +M++K KY ++ +A + +A +DPR+K S +E Y IYG +
Sbjct: 463 SFFRTDRTIKTMANAMQTKYDKYWEKSNMALA-VACFLDPRYKTSSIEYYGMKIYGLEAA 521
Query: 426 GRF------------------------RSDEMH*RTFIM----ITNKNR-*EVFQWNRLT 334
+F + EMH + + N + ++F N +
Sbjct: 522 EKFDEFNGVIKQLFDVYATSACATSKKKGAEMHVHQLQIQSDPVHNTDEFDDIFNENDSS 581
Query: 333 KEGDPTFSTFAMRKRASSQSNASELQWYLDQPILKTNNREAFDVLGWWKARQVNYPVL 160
+ + F F + + S+ +ELQ Y++QP+L +++ FD+L WWK +Q +P+L
Sbjct: 582 HDHEQHFQRFLLERSQPICSDKTELQIYMEQPLLLWTSKDTFDILSWWKLKQAEFPIL 639
Score = 23.1 bits (48), Expect(2) = 5e-11
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -3
Query: 746 PTVLDWKNAAVMRDILKVFYESS 678
PT +DW A + LK F+E++
Sbjct: 428 PTKVDWSMAIALCKCLKPFHEAT 450
>gb|ABA98519.1| hAT family dimerisation domain containing protein [Oryza sativa
Japonica Group]
Length = 337
Score = 67.0 bits (162), Expect = 4e-09
Identities = 46/176 (26%), Positives = 82/176 (46%), Gaps = 31/176 (17%)
Frame = -2
Query: 594 TDPSYASIIGSMKSKITKYLDEIPVARSRIAACMDPRHKVSFLEVYFKIIYGYDRPGRFR 415
TD + ++ +M++K KY ++ +A +A +DPR+K S +E Y IYG + +F
Sbjct: 63 TDGTIKTMANAMQTKYDKYWEKSNMALV-VACFLDPRYKTSSIEYYSMKIYGLEAAEKF- 120
Query: 414 SDEMH---------*RTFIMITNKNR*EVFQWNRLTKEGDPTFST--------------- 307
DE + T T+K + ++L + DP +T
Sbjct: 121 -DEFNGVIKKLFDVYATSACATSKKKGAEMHVHQLQIQSDPVHNTDEFDDIFNENDSSHD 179
Query: 306 -------FAMRKRASSQSNASELQWYLDQPILKTNNREAFDVLGWWKARQVNYPVL 160
F + + S+ +ELQ Y++QP+L +++ FD+L WWK +Q +P+L
Sbjct: 180 HEQHLQRFLLERSQPICSDKTELQIYMEQPLLLWTSKDPFDILSWWKLKQAEFPIL 235
>ref|NP_001060325.2| Os07g0624100 [Oryza sativa Japonica Group]
gi|255677983|dbj|BAF22239.2| Os07g0624100 [Oryza sativa
Japonica Group]
Length = 762
Score = 53.5 bits (127), Expect(2) = 1e-08
Identities = 48/174 (27%), Positives = 75/174 (43%), Gaps = 12/174 (6%)
Frame = -2
Query: 642 FFHQLSNICLVLSKYKT--DPSYASIIGSMKSKITKYLDEIPVARSRIAACMDPRHKVSF 469
+FH++ I LVL K ++ D AS++ MK K KY + I DPR K F
Sbjct: 506 YFHEMWKIKLVLDKERSNNDTEVASMVKKMKDKFDKYWLK-SYKYLCIPVIFDPRFKFKF 564
Query: 468 LEVYFKIIYGYDRPGRFRSDEMH*RTFIMI---------TNKNR*EVFQWNRLTKEGDPT 316
+E F++ + + R D++ R ++ +N N + E DP
Sbjct: 565 VE--FRLGQAFGENAKERIDKVKKRMNMLFKEYSDKLKDSNANPLRQAEHVMSISENDPM 622
Query: 315 FSTFAMRKRASSQSNASELQWYL-DQPILKTNNREAFDVLGWWKARQVNYPVLS 157
S+ +EL YL + PI + N+ FD+L WWK + YP L+
Sbjct: 623 ADWVQHISEQLSEQVDTELDIYLKENPIQEFGNK--FDILNWWKTNRSKYPTLA 674
Score = 31.6 bits (70), Expect(2) = 1e-08
Identities = 12/36 (33%), Positives = 23/36 (63%)
Frame = -3
Query: 761 SYEYIPTVLDWKNAAVMRDILKVFYESSCVRGPSMF 654
+Y+Y P+ W+ A ++ ILKV Y+++ V S++
Sbjct: 465 NYKYAPSPDQWERATIVSGILKVLYDATMVVSGSLY 500
>gb|ABA18109.1| hAT-like transposase [Arabidopsis arenosa]
Length = 654
Score = 60.5 bits (145), Expect = 4e-07
Identities = 54/178 (30%), Positives = 80/178 (44%), Gaps = 16/178 (8%)
Frame = -2
Query: 642 FFHQLSNICLVLSKYKT--DPSYASIIGSMKSKITKYLDEIPVARSRIAACMDPRHKVSF 469
FFH++ LS+ DP A I +MK K+ KY + + + +A MDPR K+
Sbjct: 425 FFHEVWKTQSDLSRAIAGEDPYVAGIAKTMKEKVDKYWRDCSLVLA-MAVVMDPRFKMKL 483
Query: 468 LEVYFKIIYGYDRPGRFRS--DEMH*RTFIMITNKNR*EVF-QWNRLTKEGDPT------ 316
+E F I+G D ++ D +H E+F ++ L PT
Sbjct: 484 VEFSFSKIFGEDAGKNIKTVDDGIH-------------ELFSEYMALPSPLKPTSEGGKA 530
Query: 315 -----FSTFAMRKRASSQSNASELQWYLDQPILKTNNREAFDVLGWWKARQVNYPVLS 157
F T+ M + Q+ SEL YLD+ +L + FDVL WWK ++ YP LS
Sbjct: 531 DGLSDFDTYIM--ETTGQNLKSELDQYLDETLLP--RVQEFDVLDWWKQNKLKYPTLS 584