BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019004
         (710 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003544381.1| PREDICTED: putative tRNA pseudouridine synth...   274   1e-71
emb|CBI18893.3| unnamed protein product [Vitis vinifera]              273   3e-71
ref|XP_002284814.1| PREDICTED: putative tRNA pseudouridine synth...   273   3e-71
ref|XP_002510624.1| conserved hypothetical protein [Ricinus comm...   270   2e-70
ref|XP_004145592.1| PREDICTED: putative tRNA pseudouridine synth...   265   9e-69

>ref|XP_003544381.1| PREDICTED: putative tRNA pseudouridine synthase Pus10-like [Glycine
           max]
          Length = 484

 Score =  274 bits (700), Expect = 1e-71
 Identities = 133/180 (73%), Positives = 150/180 (83%)
 Frame = -1

Query: 710 VRMLGSGRPFLVEVQNARHDPSKVEMTDIEEKINNSEXXXXXXXXXXXVGNQGWTIMREG 531
           VRMLG GRPFLVEVQN RH PS++ + DIE+ IN  E           VG+ GW +MREG
Sbjct: 303 VRMLGPGRPFLVEVQNGRHIPSELFVKDIEKTINKMENKLVRVKNLKLVGSDGWNLMREG 362

Query: 530 EAEKQKQYAALVWISRSLGDEDLNTLSSLKDMQIVQRTPVRVLHRRSPLDREKIIHWMKV 351
           EAEKQKQYAALVWISR L DED+  +SSLKD++++QRTP+RVLHRRSPL+REKIIHWMK 
Sbjct: 363 EAEKQKQYAALVWISRPLKDEDIQCVSSLKDLKVLQRTPIRVLHRRSPLEREKIIHWMKT 422

Query: 350 EKIVGSTQYFLLHLCTQAGTYIKEFVHGDLGRTQPSIGSILGCRAEILLLDVTDVKMDCF 171
           E I GS+QYFLLHLCTQAGTYIKEFVHGDLGRT PSIGSILGCRAEIL LDVTD+KM+CF
Sbjct: 423 ETIAGSSQYFLLHLCTQAGTYIKEFVHGDLGRTHPSIGSILGCRAEILQLDVTDIKMECF 482


>emb|CBI18893.3| unnamed protein product [Vitis vinifera]
          Length = 591

 Score =  273 bits (698), Expect = 3e-71
 Identities = 132/180 (73%), Positives = 151/180 (83%)
 Frame = -1

Query: 710 VRMLGSGRPFLVEVQNARHDPSKVEMTDIEEKINNSEXXXXXXXXXXXVGNQGWTIMREG 531
           VRMLGSGRPFLVE+QN+RH PS+  + +IE KINN E           V + GW++M+EG
Sbjct: 409 VRMLGSGRPFLVEIQNSRHVPSEALIKEIEVKINNLENKLVRVKNLKLVDSHGWSLMQEG 468

Query: 530 EAEKQKQYAALVWISRSLGDEDLNTLSSLKDMQIVQRTPVRVLHRRSPLDREKIIHWMKV 351
           E EKQKQYAALVWI R L DED+  +SSLKD +I+QRTP+RVLHRRSPL+REKIIHWMK+
Sbjct: 469 EEEKQKQYAALVWIDRPLKDEDMQAISSLKDKKILQRTPIRVLHRRSPLEREKIIHWMKI 528

Query: 350 EKIVGSTQYFLLHLCTQAGTYIKEFVHGDLGRTQPSIGSILGCRAEILLLDVTDVKMDCF 171
           EKI GS+QYFLLHLCTQAGTYIKEFVHGDLGRT PS+GSILGCRAEIL LDVT+VKMDCF
Sbjct: 529 EKIAGSSQYFLLHLCTQAGTYIKEFVHGDLGRTHPSVGSILGCRAEILQLDVTEVKMDCF 588


>ref|XP_002284814.1| PREDICTED: putative tRNA pseudouridine synthase Pus10-like [Vitis
           vinifera]
          Length = 578

 Score =  273 bits (698), Expect = 3e-71
 Identities = 132/180 (73%), Positives = 151/180 (83%)
 Frame = -1

Query: 710 VRMLGSGRPFLVEVQNARHDPSKVEMTDIEEKINNSEXXXXXXXXXXXVGNQGWTIMREG 531
           VRMLGSGRPFLVE+QN+RH PS+  + +IE KINN E           V + GW++M+EG
Sbjct: 396 VRMLGSGRPFLVEIQNSRHVPSEALIKEIEVKINNLENKLVRVKNLKLVDSHGWSLMQEG 455

Query: 530 EAEKQKQYAALVWISRSLGDEDLNTLSSLKDMQIVQRTPVRVLHRRSPLDREKIIHWMKV 351
           E EKQKQYAALVWI R L DED+  +SSLKD +I+QRTP+RVLHRRSPL+REKIIHWMK+
Sbjct: 456 EEEKQKQYAALVWIDRPLKDEDMQAISSLKDKKILQRTPIRVLHRRSPLEREKIIHWMKI 515

Query: 350 EKIVGSTQYFLLHLCTQAGTYIKEFVHGDLGRTQPSIGSILGCRAEILLLDVTDVKMDCF 171
           EKI GS+QYFLLHLCTQAGTYIKEFVHGDLGRT PS+GSILGCRAEIL LDVT+VKMDCF
Sbjct: 516 EKIAGSSQYFLLHLCTQAGTYIKEFVHGDLGRTHPSVGSILGCRAEILQLDVTEVKMDCF 575


>ref|XP_002510624.1| conserved hypothetical protein [Ricinus communis]
           gi|223551325|gb|EEF52811.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 565

 Score =  270 bits (691), Expect = 2e-70
 Identities = 132/180 (73%), Positives = 148/180 (82%)
 Frame = -1

Query: 710 VRMLGSGRPFLVEVQNARHDPSKVEMTDIEEKINNSEXXXXXXXXXXXVGNQGWTIMREG 531
           VRMLGSGRPFLVE+QN R  PS+  + +IE KINN             V N  WT+M EG
Sbjct: 383 VRMLGSGRPFLVEIQNPRQLPSETLVEEIETKINNMHDKLVGVRHLKMVSNHSWTLMHEG 442

Query: 530 EAEKQKQYAALVWISRSLGDEDLNTLSSLKDMQIVQRTPVRVLHRRSPLDREKIIHWMKV 351
           EAEKQKQY ALVWISR L D+DL +++SLKDMQI+QRTPVRVLHRRSPL+R+KIIHWMK+
Sbjct: 443 EAEKQKQYCALVWISRPLEDQDLQSIASLKDMQILQRTPVRVLHRRSPLERQKIIHWMKI 502

Query: 350 EKIVGSTQYFLLHLCTQAGTYIKEFVHGDLGRTQPSIGSILGCRAEILLLDVTDVKMDCF 171
           E++ GS QYFLLHLCTQAGTYIKEFVHGDLGRT PSIGSILGCRAEIL LDVT+VKMDCF
Sbjct: 503 ERLTGSCQYFLLHLCTQAGTYIKEFVHGDLGRTHPSIGSILGCRAEILQLDVTEVKMDCF 562


>ref|XP_004145592.1| PREDICTED: putative tRNA pseudouridine synthase Pus10-like [Cucumis
           sativus]
          Length = 497

 Score =  265 bits (676), Expect = 9e-69
 Identities = 128/179 (71%), Positives = 152/179 (84%)
 Frame = -1

Query: 710 VRMLGSGRPFLVEVQNARHDPSKVEMTDIEEKINNSEXXXXXXXXXXXVGNQGWTIMREG 531
           VRMLGSGRPFLVE+QNAR  PS++ + +I+ KIN+SE           VG++GW +++EG
Sbjct: 315 VRMLGSGRPFLVEIQNARLLPSEMIINEIQSKINSSENKLIGVRNLKVVGSEGWALVQEG 374

Query: 530 EAEKQKQYAALVWISRSLGDEDLNTLSSLKDMQIVQRTPVRVLHRRSPLDREKIIHWMKV 351
           EAEKQKQYAALVW SR L D DL ++SSLKD++I+QRTP+RVLHRRSPL+REKIIHWMK+
Sbjct: 375 EAEKQKQYAALVWTSRPLEDADLLSISSLKDLKILQRTPIRVLHRRSPLEREKIIHWMKI 434

Query: 350 EKIVGSTQYFLLHLCTQAGTYIKEFVHGDLGRTQPSIGSILGCRAEILLLDVTDVKMDC 174
           EK+  S+QY+LLHLCTQAGTYIKEFVHGDLGRT PSIGSIL CRAEIL LDVTD+KMDC
Sbjct: 435 EKVAESSQYYLLHLCTQAGTYIKEFVHGDLGRTHPSIGSILSCRAEILQLDVTDIKMDC 493