BLASTX nr result

ID: Coptis24_contig00018996 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018996
         (573 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277585.1| PREDICTED: uncharacterized protein LOC100264...   124   1e-26
ref|XP_002300034.1| predicted protein [Populus trichocarpa] gi|2...   121   9e-26
ref|XP_002524648.1| ATP binding protein, putative [Ricinus commu...   119   5e-25
dbj|BAJ95124.1| predicted protein [Hordeum vulgare subsp. vulgar...   114   9e-24
ref|NP_001057665.1| Os06g0486400 [Oryza sativa Japonica Group] g...   111   7e-23

>ref|XP_002277585.1| PREDICTED: uncharacterized protein LOC100264532 [Vitis vinifera]
          Length = 662

 Score =  124 bits (310), Expect = 1e-26
 Identities = 70/145 (48%), Positives = 96/145 (66%), Gaps = 2/145 (1%)
 Frame = +1

Query: 1   VGDISEGTIIRRKGRFKVTSEDLSPKGTPILSGHSSSEFSTGIIAPPVLAASVMPSLQSI 180
           V D  EG +++ KGRFKVTS +LSPKG         S  ST    P + AAS++PSLQ +
Sbjct: 508 VEDTPEGAVVQCKGRFKVTSAELSPKGPTNCFFSQVSGGSTSPTTPSLTAASILPSLQFV 567

Query: 181 LLQNNVQREALVKLIKSVDGT--SEFADVGTIDMSQISPGSARERELQALVAHLQQSNDD 354
           L QN +QRE ++KLIK V+ +  +   + G+ID+SQI   S RE+ELQ+ V HLQQS   
Sbjct: 568 LQQNTMQREGIMKLIKYVEQSCGNHIEEAGSIDLSQIHAVSTREKELQSQVIHLQQSIGT 627

Query: 355 LGKQLQRMKAENAQLEGQVNALSNK 429
           L ++LQR K +NAQ+E  +NA++NK
Sbjct: 628 LVEELQRQKLKNAQVERHLNAVANK 652


>ref|XP_002300034.1| predicted protein [Populus trichocarpa] gi|222847292|gb|EEE84839.1|
           predicted protein [Populus trichocarpa]
          Length = 694

 Score =  121 bits (303), Expect = 9e-26
 Identities = 76/156 (48%), Positives = 96/156 (61%), Gaps = 10/156 (6%)
 Frame = +1

Query: 1   VGDISEGTIIRRKGRFKVTSEDLSPKG------TPILSGHSSSEFSTGIIAPPVLAASVM 162
           V D SEG +++RKGRFKVTS DLSPKG       P+  G + +  S         A+SV+
Sbjct: 543 VEDTSEGAVVQRKGRFKVTSADLSPKGPTNCCFNPVGGGSACATISNPA------ASSVL 596

Query: 163 PSLQSILLQNNVQREALVKLIKSVDGTS----EFADVGTIDMSQISPGSARERELQALVA 330
           PSLQ IL QN +QRE ++KLIK V+ TS    E  +  T D+ QISP   RE+ELQA   
Sbjct: 597 PSLQCILQQNTLQREEILKLIKYVEQTSGKLVESGEAATNDLLQISPTWTREKELQAQFI 656

Query: 331 HLQQSNDDLGKQLQRMKAENAQLEGQVNALSNKDDE 438
            LQQS   L ++LQR K +N QLE Q+NA  NK+ E
Sbjct: 657 GLQQSVGSLFEELQRQKMKNVQLERQLNAFINKERE 692


>ref|XP_002524648.1| ATP binding protein, putative [Ricinus communis]
           gi|223536009|gb|EEF37667.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 327

 Score =  119 bits (297), Expect = 5e-25
 Identities = 74/146 (50%), Positives = 96/146 (65%), Gaps = 5/146 (3%)
 Frame = +1

Query: 7   DISEGTIIRRKGRFKVTSEDLSPKGTPILSGHSSSEFSTGIIAPP-VLAASVMPSLQSIL 183
           D+SEG +++ +GRFKVTS +LSPKG       ++  F+     P  V AASV+PSLQ IL
Sbjct: 188 DVSEGAVVQCRGRFKVTSAELSPKGP------TNCYFAPVCGVPSNVTAASVLPSLQCIL 241

Query: 184 LQNNVQREALVKLIKSVDGTS----EFADVGTIDMSQISPGSARERELQALVAHLQQSND 351
            QN  QRE ++KLIK V+  S    E A+  T D SQ+SP S RE+ELQA + +LQQS  
Sbjct: 242 QQNAAQREEILKLIKYVEQGSGKQMELAEAATNDQSQVSPTSTREKELQAQLINLQQSIG 301

Query: 352 DLGKQLQRMKAENAQLEGQVNALSNK 429
            L ++LQR K +NAQLE Q+NAL  K
Sbjct: 302 SLVEELQRQKLKNAQLERQLNALVYK 327


>dbj|BAJ95124.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326509725|dbj|BAJ87078.1| predicted protein [Hordeum
           vulgare subsp. vulgare]
          Length = 702

 Score =  114 bits (286), Expect = 9e-24
 Identities = 55/143 (38%), Positives = 94/143 (65%)
 Frame = +1

Query: 7   DISEGTIIRRKGRFKVTSEDLSPKGTPILSGHSSSEFSTGIIAPPVLAASVMPSLQSILL 186
           + SEG +++R+GRF+VTS+    K     S +S +   +G+  P   +++++P+LQ ++ 
Sbjct: 550 EASEGNVVQRRGRFQVTSDSPGQKAASSASSNSRANLPSGVTRPASNSSTILPTLQFLMQ 609

Query: 187 QNNVQREALVKLIKSVDGTSEFADVGTIDMSQISPGSARERELQALVAHLQQSNDDLGKQ 366
           QN++Q+E L +LI S++ TS+ +D  T+  SQ S   ARE+ L++ V  LQ+S  +L ++
Sbjct: 610 QNSMQKEVLSRLISSIEETSDASDASTVGSSQSSGSLAREKGLESYVVQLQRSVTELAEE 669

Query: 367 LQRMKAENAQLEGQVNALSNKDD 435
           +QR+K  N QLE Q+N LS KD+
Sbjct: 670 VQRLKLRNNQLEHQINGLSKKDE 692


>ref|NP_001057665.1| Os06g0486400 [Oryza sativa Japonica Group]
           gi|51535448|dbj|BAD37346.1| putative oxidative-stress
           responsive [Oryza sativa Japonica Group]
           gi|113595705|dbj|BAF19579.1| Os06g0486400 [Oryza sativa
           Japonica Group]
          Length = 693

 Score =  111 bits (278), Expect = 7e-23
 Identities = 57/141 (40%), Positives = 91/141 (64%)
 Frame = +1

Query: 13  SEGTIIRRKGRFKVTSEDLSPKGTPILSGHSSSEFSTGIIAPPVLAASVMPSLQSILLQN 192
           SEG +I+R+GRF+VTS+ ++ K     S    S    G+    V  ++++P+LQ ++ QN
Sbjct: 543 SEGKVIQRRGRFQVTSDSIAQKVASSASSSRCSNLPIGVTRSTVHPSTILPTLQFMIQQN 602

Query: 193 NVQREALVKLIKSVDGTSEFADVGTIDMSQISPGSARERELQALVAHLQQSNDDLGKQLQ 372
            +Q+E + +LI S++  S+ AD  T   SQ S    RE+ELQ+ +A+LQQS  +L +++Q
Sbjct: 603 TMQKEVISRLISSIEEISDAADASTTGSSQPSGVHFREKELQSYIANLQQSVTELAEEVQ 662

Query: 373 RMKAENAQLEGQVNALSNKDD 435
           R+K +N QLE Q+NAL  KD+
Sbjct: 663 RLKLKNTQLEEQINALPKKDE 683


Top