BLASTX nr result

ID: Coptis24_contig00018995 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018995
         (943 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517123.1| protein binding protein, putative [Ricinus c...   129   1e-27
ref|XP_002315765.1| predicted protein [Populus trichocarpa] gi|2...   127   5e-27
ref|XP_002889548.1| hypothetical protein ARALYDRAFT_470543 [Arab...   114   3e-23
ref|NP_001030974.1| uncharacterized protein [Arabidopsis thalian...   114   4e-23
gb|AAM65388.1| unknown [Arabidopsis thaliana]                         114   4e-23

>ref|XP_002517123.1| protein binding protein, putative [Ricinus communis]
           gi|223543758|gb|EEF45286.1| protein binding protein,
           putative [Ricinus communis]
          Length = 479

 Score =  129 bits (323), Expect = 1e-27
 Identities = 75/164 (45%), Positives = 105/164 (64%), Gaps = 1/164 (0%)
 Frame = +1

Query: 7   LGDIWNSEDRKAGISAGKITHSRRNGALPQV-FDNVQQTQQPVYITSDNRLESSEIKEKI 183
           L DIW  E+  + IS  +   +       Q   DN   +     ++SD   E+ ++++++
Sbjct: 319 LEDIWKIEEDISAISTEQGPRAMVEVTNQQDHLDNKTSSPDSFALSSDFEAETVKLEDEV 378

Query: 184 ERALQDLTDSQEYEYKIAKESLCDQKDFILDLYHQLDTERSELAKRTSSSADCNIDALVT 363
           E+AL +L  SQ  E++IA+E L  QK ++ +LY QL+ E+SEL + TSS+     D LV 
Sbjct: 379 EKALYELQKSQASEFEIAEERLMAQKKYLQNLYQQLEREKSELKRPTSSTKR---DVLVK 435

Query: 364 NILKKVNQIKREVLKLKDMEEVAKGFGRVPKEILKEHFDLQIEE 495
            +L++VNQIKREV KLKDMEEVAKGFGR PK ILKEHF L+IEE
Sbjct: 436 AVLERVNQIKREVAKLKDMEEVAKGFGRTPKSILKEHFGLEIEE 479


>ref|XP_002315765.1| predicted protein [Populus trichocarpa] gi|222864805|gb|EEF01936.1|
           predicted protein [Populus trichocarpa]
          Length = 481

 Score =  127 bits (318), Expect = 5e-27
 Identities = 77/168 (45%), Positives = 110/168 (65%), Gaps = 5/168 (2%)
 Frame = +1

Query: 7   LGDIWNSEDRKAGISAGKITHSRRNGALPQVFDN-----VQQTQQPVYITSDNRLESSEI 171
           L DIW  E     +SA     S    A+ +V ++      +++   V ++SD++ ES ++
Sbjct: 320 LEDIWKVEGE---VSAILPAVSPNGNAMLEVSNHQDILDFRKSSPDVSMSSDSQTESLKL 376

Query: 172 KEKIERALQDLTDSQEYEYKIAKESLCDQKDFILDLYHQLDTERSELAKRTSSSADCNID 351
           +++I + LQ L  SQE EYKIA+E L  QK ++ +LY QLD ERSELA+RT  +   N D
Sbjct: 377 EDEINQVLQALQVSQEAEYKIAEERLYAQKKYLQNLYQQLDKERSELARRTLIT---NPD 433

Query: 352 ALVTNILKKVNQIKREVLKLKDMEEVAKGFGRVPKEILKEHFDLQIEE 495
            L++ +L +V+QIKREV KLKDMEEVA GFGR  K+ILKEHF L++E+
Sbjct: 434 DLLSAVLSRVDQIKREVTKLKDMEEVANGFGRTSKDILKEHFGLEVEK 481


>ref|XP_002889548.1| hypothetical protein ARALYDRAFT_470543 [Arabidopsis lyrata subsp.
           lyrata] gi|297335390|gb|EFH65807.1| hypothetical protein
           ARALYDRAFT_470543 [Arabidopsis lyrata subsp. lyrata]
          Length = 471

 Score =  114 bits (286), Expect = 3e-23
 Identities = 63/163 (38%), Positives = 103/163 (63%)
 Frame = +1

Query: 7   LGDIWNSEDRKAGISAGKITHSRRNGALPQVFDNVQQTQQPVYITSDNRLESSEIKEKIE 186
           L D+WN +             +R N  L     ++Q       I  ++  E  +++E+I 
Sbjct: 316 LEDLWNDDTPTIWSDYSDSGEARDNDTL----QSLQDVTPIGPIPFNHEAEMHKLEEEIG 371

Query: 187 RALQDLTDSQEYEYKIAKESLCDQKDFILDLYHQLDTERSELAKRTSSSADCNIDALVTN 366
             L+ L  +QE+EY+IA+  L  QK+ + DLY QL+ E+SEL++R S +   ++++L+TN
Sbjct: 372 EVLRALRKAQEFEYQIAEGKLHAQKECLSDLYRQLEKEKSELSRRVSGT---DVNSLMTN 428

Query: 367 ILKKVNQIKREVLKLKDMEEVAKGFGRVPKEILKEHFDLQIEE 495
           +LK+++QI++EV KLK+MEEVAKGFGR P+ +L+E+F L IE+
Sbjct: 429 VLKRLDQIRKEVTKLKEMEEVAKGFGRTPRGVLEEYFHLSIED 471


>ref|NP_001030974.1| uncharacterized protein [Arabidopsis thaliana]
           gi|222424026|dbj|BAH19974.1| AT1G05410 [Arabidopsis
           thaliana] gi|332189716|gb|AEE27837.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 444

 Score =  114 bits (284), Expect = 4e-23
 Identities = 63/163 (38%), Positives = 102/163 (62%)
 Frame = +1

Query: 7   LGDIWNSEDRKAGISAGKITHSRRNGALPQVFDNVQQTQQPVYITSDNRLESSEIKEKIE 186
           L D+WN +             +R N  L     ++Q       I  ++  E  +++E+I 
Sbjct: 289 LEDLWNDDTPTIWSDYSDSGEARENDTL----QSLQDVTPIGPIPFNHEAEMHKLEEEIG 344

Query: 187 RALQDLTDSQEYEYKIAKESLCDQKDFILDLYHQLDTERSELAKRTSSSADCNIDALVTN 366
             L+ L  +QE+EY+IA+  L  QK+ + DLY QL+ E+SEL++R S +   + ++L+TN
Sbjct: 345 EVLRALRKAQEFEYQIAEGKLHAQKECLSDLYRQLEKEKSELSRRVSGT---DANSLMTN 401

Query: 367 ILKKVNQIKREVLKLKDMEEVAKGFGRVPKEILKEHFDLQIEE 495
           +LK+++QI++EV KLK+MEEVAKGFGR P+ +L+E+F L IE+
Sbjct: 402 VLKRLDQIRKEVTKLKEMEEVAKGFGRTPRGVLEEYFHLNIED 444


>gb|AAM65388.1| unknown [Arabidopsis thaliana]
          Length = 471

 Score =  114 bits (284), Expect = 4e-23
 Identities = 63/163 (38%), Positives = 102/163 (62%)
 Frame = +1

Query: 7   LGDIWNSEDRKAGISAGKITHSRRNGALPQVFDNVQQTQQPVYITSDNRLESSEIKEKIE 186
           L D+WN +             +R N  L     ++Q       I  ++  E  +++E+I 
Sbjct: 316 LEDLWNDDTPTIWSDYSDSGEARENDTL----QSLQDVTPIGPIPFNHEAEMHKLEEEIG 371

Query: 187 RALQDLTDSQEYEYKIAKESLCDQKDFILDLYHQLDTERSELAKRTSSSADCNIDALVTN 366
             L+ L  +QE+EY+IA+  L  QK+ + DLY QL+ E+SEL++R S +   + ++L+TN
Sbjct: 372 EVLRALRKAQEFEYQIAEGKLHAQKECLSDLYRQLEKEKSELSRRVSGT---DANSLMTN 428

Query: 367 ILKKVNQIKREVLKLKDMEEVAKGFGRVPKEILKEHFDLQIEE 495
           +LK+++QI++EV KLK+MEEVAKGFGR P+ +L+E+F L IE+
Sbjct: 429 VLKRLDQIRKEVTKLKEMEEVAKGFGRTPRGVLEEYFHLNIED 471


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