BLASTX nr result

ID: Coptis24_contig00018988 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018988
         (843 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285740.1| PREDICTED: uncharacterized protein LOC100260...   129   8e-28
ref|XP_002304851.1| predicted protein [Populus trichocarpa] gi|2...   105   1e-20
ref|XP_002299100.1| predicted protein [Populus trichocarpa] gi|2...   100   5e-19
ref|XP_002334049.1| predicted protein [Populus trichocarpa] gi|2...    98   3e-18
ref|XP_004144070.1| PREDICTED: uncharacterized protein LOC101217...    86   1e-14

>ref|XP_002285740.1| PREDICTED: uncharacterized protein LOC100260500 [Vitis vinifera]
           gi|297746488|emb|CBI16544.3| unnamed protein product
           [Vitis vinifera]
          Length = 134

 Score =  129 bits (324), Expect = 8e-28
 Identities = 66/133 (49%), Positives = 83/133 (62%), Gaps = 2/133 (1%)
 Frame = +3

Query: 96  MRVLFSKLHCPSFICFCKPSPHLLSPIPLKLENTPNVPTTVSSVPDGVVQLSLEAAEVEK 275
           MRVLF K+HCPSFICFCKPSPH+ +P PLKLEN P+VP ++ S+PDG   LS +  EV+ 
Sbjct: 1   MRVLFCKIHCPSFICFCKPSPHIYTPGPLKLENNPHVPPSIVSIPDGENHLSGDTIEVKD 60

Query: 276 VSLDEKQEVEVVPXXXXXXXXXQAG--KEGEKGKVQWMDFFGKELAEIREFDAXXXXXXX 449
            S D KQ  E +          + G  KE  K +VQWMDF GKEL EI+EF++       
Sbjct: 61  GSSDGKQPDENLLKTSLKKAPSEPGTPKEVGKKRVQWMDFLGKELVEIKEFESSETGDTD 120

Query: 450 XXXXXIRGCICVI 488
                 RGC+C+I
Sbjct: 121 TEAEDNRGCVCII 133


>ref|XP_002304851.1| predicted protein [Populus trichocarpa] gi|222842283|gb|EEE79830.1|
           predicted protein [Populus trichocarpa]
          Length = 127

 Score =  105 bits (263), Expect = 1e-20
 Identities = 61/118 (51%), Positives = 74/118 (62%), Gaps = 7/118 (5%)
 Frame = +3

Query: 96  MRVLFSKLHCPSFICFCKPSPHLLSPIPLKLENTPNVPTT-VSSVPDG------VVQLSL 254
           MRVLFSK+HCPSFICFCKPSP + +P PLKLEN+P+VP+T V SV D       V+  S+
Sbjct: 1   MRVLFSKIHCPSFICFCKPSPSIYTPGPLKLENSPHVPSTAVISVADASSNDNHVLSDSI 60

Query: 255 EAAEVEKVSLDEKQEVEVVPXXXXXXXXXQAGKEGEKGKVQWMDFFGKELAEIREFDA 428
           E  E   V +D KQ                  KE +K KVQW+DF GKEL EIREF++
Sbjct: 61  EVKE-GSVGVDGKQPESQNSLKSSLKRAAFDSKEVDKKKVQWIDFLGKELVEIREFES 117


>ref|XP_002299100.1| predicted protein [Populus trichocarpa] gi|222846358|gb|EEE83905.1|
           predicted protein [Populus trichocarpa]
          Length = 149

 Score =  100 bits (248), Expect = 5e-19
 Identities = 58/119 (48%), Positives = 70/119 (58%), Gaps = 7/119 (5%)
 Frame = +3

Query: 93  FMRVLFSKLHCPSFICFCKPSPHLLSPIPLKLENTPNVPTT-------VSSVPDGVVQLS 251
           FMRVLF K+HCP FICFCKPSP +  P PLKLEN+P+VP+T        S   D V+  S
Sbjct: 17  FMRVLFCKIHCP-FICFCKPSPRIYGPAPLKLENSPHVPSTAVISVVDASCDDDHVLNDS 75

Query: 252 LEAAEVEKVSLDEKQEVEVVPXXXXXXXXXQAGKEGEKGKVQWMDFFGKELAEIREFDA 428
           +E  E   V +D KQ                  KE +K KV+WMDF GKEL EIREF++
Sbjct: 76  VEVKE-GSVGVDGKQSQAQNGLKSSLKKADFDSKEVDKKKVRWMDFLGKELVEIREFES 133


>ref|XP_002334049.1| predicted protein [Populus trichocarpa] gi|222839667|gb|EEE77990.1|
           predicted protein [Populus trichocarpa]
          Length = 132

 Score = 97.8 bits (242), Expect = 3e-18
 Identities = 57/118 (48%), Positives = 69/118 (58%), Gaps = 7/118 (5%)
 Frame = +3

Query: 96  MRVLFSKLHCPSFICFCKPSPHLLSPIPLKLENTPNVPTT-------VSSVPDGVVQLSL 254
           MRVLF K+HCP FICFCKPSP +  P PLKLEN+P+VP+T        S   D V+  S+
Sbjct: 1   MRVLFCKIHCP-FICFCKPSPRIYGPAPLKLENSPHVPSTAVISVVDASCDDDHVLNDSV 59

Query: 255 EAAEVEKVSLDEKQEVEVVPXXXXXXXXXQAGKEGEKGKVQWMDFFGKELAEIREFDA 428
           E  E   V +D KQ                  KE +K KV+WMDF GKEL EIREF++
Sbjct: 60  EVKE-GSVGVDGKQSQAQNGLKSSLKKADFDSKEVDKKKVRWMDFLGKELVEIREFES 116


>ref|XP_004144070.1| PREDICTED: uncharacterized protein LOC101217749 [Cucumis sativus]
           gi|449521459|ref|XP_004167747.1| PREDICTED:
           uncharacterized LOC101217749 [Cucumis sativus]
          Length = 139

 Score = 85.5 bits (210), Expect = 1e-14
 Identities = 56/138 (40%), Positives = 72/138 (52%), Gaps = 7/138 (5%)
 Frame = +3

Query: 96  MRVLFSKLHCPSFICFCKPSPHLLSP--IPLKLENTPNVPTTVSSVPDGVVQL--SLEAA 263
           MR    K+HCPS  C C+P+PH+ S   IPL LEN+ ++P+ V SV    V +  +LE+ 
Sbjct: 1   MRFWMCKIHCPSSFCLCQPAPHIYSTGSIPLDLENSSHLPSEVESVIGTSVSIVETLESK 60

Query: 264 -EVEKVSLDEKQEVEVVPXXXXXXXXXQAGKEGEKG--KVQWMDFFGKELAEIREFDAXX 434
            E    S D+ QE E            ++G   EK   +VQWMDF GKEL EIREF+A  
Sbjct: 61  QECRDESGDKVQENEYGIKSSLRKSSLRSGVSKEKHVKRVQWMDFSGKELVEIREFEASE 120

Query: 435 XXXXXXXXXXIRGCICVI 488
                      R CIC I
Sbjct: 121 AEDSDYESEDNRSCICTI 138


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