BLASTX nr result

ID: Coptis24_contig00018951 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018951
         (391 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300240.1| predicted protein [Populus trichocarpa] gi|2...    86   2e-21
ref|NP_001240079.1| uncharacterized protein LOC100805970 [Glycin...    87   3e-19
ref|XP_002518679.1| expressed protein, putative [Ricinus communi...    86   9e-19
gb|AFK33587.1| unknown [Lotus japonicus]                               87   3e-18
ref|XP_003536611.1| PREDICTED: PRKR-interacting protein 1-like [...    87   5e-18

>ref|XP_002300240.1| predicted protein [Populus trichocarpa] gi|222847498|gb|EEE85045.1|
           predicted protein [Populus trichocarpa]
          Length = 173

 Score = 85.9 bits (211), Expect(2) = 2e-21
 Identities = 40/59 (67%), Positives = 48/59 (81%)
 Frame = +3

Query: 213 KEEEDLEIKLRRIIDNVPVRVNNTXXXXXXXXXXDFHQYRQMRRKEQDRLARMDAHYEK 389
           +EEEDLE+KLRRI++NVPVRV+NT          DFHQYRQMRR+EQDRLARMDA Y++
Sbjct: 48  EEEEDLEVKLRRILENVPVRVSNTSGSSAGSGSGDFHQYRQMRRREQDRLARMDADYQR 106



 Score = 41.2 bits (95), Expect(2) = 2e-21
 Identities = 23/44 (52%), Positives = 32/44 (72%)
 Frame = +2

Query: 2   QLVPVPKRTQSFSSSLPPLPIAKNPTPSTALVEYTSKPVKEEED 133
           Q+V  P++T+    +LPPLP+A   T STALVEYT+  +KEEE+
Sbjct: 12  QVVAAPEKTKP---ALPPLPLAAR-TGSTALVEYTAPVLKEEEE 51


>ref|NP_001240079.1| uncharacterized protein LOC100805970 [Glycine max]
           gi|255646408|gb|ACU23683.1| unknown [Glycine max]
          Length = 170

 Score = 87.4 bits (215), Expect(2) = 3e-19
 Identities = 42/59 (71%), Positives = 47/59 (79%)
 Frame = +3

Query: 213 KEEEDLEIKLRRIIDNVPVRVNNTXXXXXXXXXXDFHQYRQMRRKEQDRLARMDAHYEK 389
           +EEEDLE+KLRRIIDNVPVRV+NT          DFHQYRQMRRKEQDRLARM+  Y+K
Sbjct: 43  EEEEDLEVKLRRIIDNVPVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMEVDYQK 101



 Score = 32.3 bits (72), Expect(2) = 3e-19
 Identities = 20/44 (45%), Positives = 25/44 (56%)
 Frame = +2

Query: 2   QLVPVPKRTQSFSSSLPPLPIAKNPTPSTALVEYTSKPVKEEED 133
           Q+VP P       +S PPLP A     S A+VEYT   +KEEE+
Sbjct: 12  QMVPAP------GTSKPPLPPA---AASNAIVEYTPVSLKEEEE 46


>ref|XP_002518679.1| expressed protein, putative [Ricinus communis]
           gi|223542060|gb|EEF43604.1| expressed protein, putative
           [Ricinus communis]
          Length = 180

 Score = 85.9 bits (211), Expect(2) = 9e-19
 Identities = 41/59 (69%), Positives = 47/59 (79%)
 Frame = +3

Query: 213 KEEEDLEIKLRRIIDNVPVRVNNTXXXXXXXXXXDFHQYRQMRRKEQDRLARMDAHYEK 389
           +EEEDLE+KLRRII+NVPVRV+NT          DFHQYRQMRRKEQDRLARM+  Y+K
Sbjct: 52  EEEEDLEVKLRRIIENVPVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMEVDYQK 110



 Score = 32.3 bits (72), Expect(2) = 9e-19
 Identities = 20/47 (42%), Positives = 29/47 (61%), Gaps = 3/47 (6%)
 Frame = +2

Query: 2   QLVPVPKRTQSFSSSLPPLPIAK---NPTPSTALVEYTSKPVKEEED 133
           QL+  P++ +    +LPP P+       T STALVEYT+  +KEEE+
Sbjct: 12  QLMVQPEKPKP---ALPPRPLVAAMGTGTGSTALVEYTAPMLKEEEE 55


>gb|AFK33587.1| unknown [Lotus japonicus]
          Length = 125

 Score = 86.7 bits (213), Expect(2) = 3e-18
 Identities = 42/59 (71%), Positives = 47/59 (79%)
 Frame = +3

Query: 213 KEEEDLEIKLRRIIDNVPVRVNNTXXXXXXXXXXDFHQYRQMRRKEQDRLARMDAHYEK 389
           +EEEDLEIKLRRIIDNVPVRV+NT          DFHQYRQMRRKEQDRLARM+  Y++
Sbjct: 42  EEEEDLEIKLRRIIDNVPVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMEVDYQR 100



 Score = 30.0 bits (66), Expect(2) = 3e-18
 Identities = 21/44 (47%), Positives = 25/44 (56%)
 Frame = +2

Query: 2   QLVPVPKRTQSFSSSLPPLPIAKNPTPSTALVEYTSKPVKEEED 133
           Q+V VP        S PPLP A   T S+A+VEYT    +EEED
Sbjct: 12  QMVAVP------GMSKPPLPPA---TSSSAIVEYTPVFKEEEED 46


>ref|XP_003536611.1| PREDICTED: PRKR-interacting protein 1-like [Glycine max]
          Length = 170

 Score = 86.7 bits (213), Expect(2) = 5e-18
 Identities = 42/59 (71%), Positives = 47/59 (79%)
 Frame = +3

Query: 213 KEEEDLEIKLRRIIDNVPVRVNNTXXXXXXXXXXDFHQYRQMRRKEQDRLARMDAHYEK 389
           ++EEDLEIKLRRIIDNVPVRV+NT          DFHQYRQMRRKEQDRLARM+  Y+K
Sbjct: 43  EDEEDLEIKLRRIIDNVPVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMEVDYQK 101



 Score = 29.3 bits (64), Expect(2) = 5e-18
 Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
 Frame = +2

Query: 2   QLVPVPKRTQSFSSSLPPLPIAKNPTPST-ALVEYTSKPVKEEED 133
           Q+VP P       +S PPLP    P  +T A+VEYT   +KE+E+
Sbjct: 12  QMVPAP------GTSKPPLP----PVAATNAIVEYTPVSLKEDEE 46


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