BLASTX nr result

ID: Coptis24_contig00018947 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018947
         (876 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285845.2| PREDICTED: auxin-induced protein 5NG4 [Vitis...   354   1e-95
emb|CBI19037.3| unnamed protein product [Vitis vinifera]              354   1e-95
ref|XP_002302243.1| predicted protein [Populus trichocarpa] gi|2...   330   3e-88
ref|XP_002513792.1| Auxin-induced protein 5NG4, putative [Ricinu...   326   4e-87
ref|XP_002306626.1| predicted protein [Populus trichocarpa] gi|2...   323   4e-86

>ref|XP_002285845.2| PREDICTED: auxin-induced protein 5NG4 [Vitis vinifera]
          Length = 389

 Score =  354 bits (909), Expect = 1e-95
 Identities = 175/274 (63%), Positives = 212/274 (77%)
 Frame = +3

Query: 54  MGDQGKYRNLIANFSKVKAYLAMVTLQCGYAGMVILTMLCLNRGLNHNILVVYRNAAATI 233
           MGDQ  +  L   FSKVKAYL +V+LQ GYAGM I+TM+ L  G+NH +LVVYR+A AT+
Sbjct: 1   MGDQTLFVKLSLMFSKVKAYLGIVSLQFGYAGMYIITMVSLKHGMNHYVLVVYRHAVATL 60

Query: 234 AVAPFALIFERKIRPKMTISIFIKIMALGLIEPVIDQNLYYMGMKYTSATFASAILNIQP 413
            +APFAL+ ERK+RPKMT+S F+KIM LG +EPV+DQNLYY+GMKYTSATFASA +N+ P
Sbjct: 61  VIAPFALVLERKVRPKMTLSTFLKIMVLGFLEPVLDQNLYYVGMKYTSATFASATVNVLP 120

Query: 414 AVTFTMAIIFRLEKVKIKSIHGQAKIAGTIVSLGGAMIMTLYKGPIIDMVWSTRENHSGX 593
           A+TF +AIIFRLEK+ IK I  QAK+ GT++++ GAM+MTLYKGPIID + +   +H   
Sbjct: 121 AITFILAIIFRLEKINIKKIPSQAKVIGTLITVTGAMVMTLYKGPIIDFIHTRGISHH-E 179

Query: 594 XXXXXXXAQNWFVGTLMLLGSCTTWSGFFILQSITLKEYPAELSLTLLIVFMGVIQGGVV 773
                   QNW  GTLMLLGSC  WSGFFILQS TLK+YPAELSLT LI FMG +QG  V
Sbjct: 180 SSSDPSAGQNWATGTLMLLGSCFGWSGFFILQSFTLKQYPAELSLTALICFMGTVQGAAV 239

Query: 774 ALVMERDFSAWVIGFDSRLLAPVYSGIVGSAFAY 875
           ALVMERD +AW +GFDSR+LA  YSG+V S  AY
Sbjct: 240 ALVMERDKAAWAVGFDSRILAAAYSGVVCSGIAY 273


>emb|CBI19037.3| unnamed protein product [Vitis vinifera]
          Length = 391

 Score =  354 bits (909), Expect = 1e-95
 Identities = 175/274 (63%), Positives = 212/274 (77%)
 Frame = +3

Query: 54  MGDQGKYRNLIANFSKVKAYLAMVTLQCGYAGMVILTMLCLNRGLNHNILVVYRNAAATI 233
           MGDQ  +  L   FSKVKAYL +V+LQ GYAGM I+TM+ L  G+NH +LVVYR+A AT+
Sbjct: 1   MGDQTLFVKLSLMFSKVKAYLGIVSLQFGYAGMYIITMVSLKHGMNHYVLVVYRHAVATL 60

Query: 234 AVAPFALIFERKIRPKMTISIFIKIMALGLIEPVIDQNLYYMGMKYTSATFASAILNIQP 413
            +APFAL+ ERK+RPKMT+S F+KIM LG +EPV+DQNLYY+GMKYTSATFASA +N+ P
Sbjct: 61  VIAPFALVLERKVRPKMTLSTFLKIMVLGFLEPVLDQNLYYVGMKYTSATFASATVNVLP 120

Query: 414 AVTFTMAIIFRLEKVKIKSIHGQAKIAGTIVSLGGAMIMTLYKGPIIDMVWSTRENHSGX 593
           A+TF +AIIFRLEK+ IK I  QAK+ GT++++ GAM+MTLYKGPIID + +   +H   
Sbjct: 121 AITFILAIIFRLEKINIKKIPSQAKVIGTLITVTGAMVMTLYKGPIIDFIHTRGISHH-E 179

Query: 594 XXXXXXXAQNWFVGTLMLLGSCTTWSGFFILQSITLKEYPAELSLTLLIVFMGVIQGGVV 773
                   QNW  GTLMLLGSC  WSGFFILQS TLK+YPAELSLT LI FMG +QG  V
Sbjct: 180 SSSDPSAGQNWATGTLMLLGSCFGWSGFFILQSFTLKQYPAELSLTALICFMGTVQGAAV 239

Query: 774 ALVMERDFSAWVIGFDSRLLAPVYSGIVGSAFAY 875
           ALVMERD +AW +GFDSR+LA  YSG+V S  AY
Sbjct: 240 ALVMERDKAAWAVGFDSRILAAAYSGVVCSGIAY 273


>ref|XP_002302243.1| predicted protein [Populus trichocarpa] gi|222843969|gb|EEE81516.1|
           predicted protein [Populus trichocarpa]
          Length = 349

 Score =  330 bits (846), Expect = 3e-88
 Identities = 163/259 (62%), Positives = 197/259 (76%)
 Frame = +3

Query: 99  KVKAYLAMVTLQCGYAGMVILTMLCLNRGLNHNILVVYRNAAATIAVAPFALIFERKIRP 278
           KVK YLAMV+LQ GYAGM I+TM+ L  G++H IL VYR+  ATI +APFAL+ ERKIRP
Sbjct: 3   KVKPYLAMVSLQFGYAGMYIITMVSLKHGMSHYILAVYRHVVATIVIAPFALVLERKIRP 62

Query: 279 KMTISIFIKIMALGLIEPVIDQNLYYMGMKYTSATFASAILNIQPAVTFTMAIIFRLEKV 458
           K+T+ IF++IMALG +EPV+DQNLYY+GMKYTSATFASA +N  PA+TF MA+IFRLE V
Sbjct: 63  KLTLPIFLRIMALGFLEPVLDQNLYYLGMKYTSATFASATVNALPAITFIMALIFRLETV 122

Query: 459 KIKSIHGQAKIAGTIVSLGGAMIMTLYKGPIIDMVWSTRENHSGXXXXXXXXAQNWFVGT 638
             K +H  AK+ GT++++ GAM+MTLYKGPIID + S    H G         Q+W  GT
Sbjct: 123 NFKKLHSAAKVVGTVITVTGAMVMTLYKGPIIDFIRSQGAAHRGTTSNASGN-QHWLTGT 181

Query: 639 LMLLGSCTTWSGFFILQSITLKEYPAELSLTLLIVFMGVIQGGVVALVMERDFSAWVIGF 818
           LMLL SC  W+ FFILQS TLK+YPAELSLT LI   G+++G  V+LVMERD SAW IGF
Sbjct: 182 LMLLASCCGWASFFILQSFTLKKYPAELSLTALICMTGMVEGAAVSLVMERDMSAWKIGF 241

Query: 819 DSRLLAPVYSGIVGSAFAY 875
           DSRLLA  YSG+V S  AY
Sbjct: 242 DSRLLAAAYSGVVCSGIAY 260


>ref|XP_002513792.1| Auxin-induced protein 5NG4, putative [Ricinus communis]
           gi|223546878|gb|EEF48375.1| Auxin-induced protein 5NG4,
           putative [Ricinus communis]
          Length = 370

 Score =  326 bits (836), Expect = 4e-87
 Identities = 160/275 (58%), Positives = 208/275 (75%), Gaps = 1/275 (0%)
 Frame = +3

Query: 54  MGDQGKYRNLIANFSKVKAYLAMVTLQCGYAGMVILTMLCLNRGLNHNILVVYRNAAATI 233
           M +Q   + L     KVK ++A+V+LQ GYAGM I+TM+ L RG++H IL VYR+  AT+
Sbjct: 1   MEEQSLCKKLCQGIIKVKPFIAIVSLQFGYAGMYIITMVSLKRGMSHYILAVYRHVVATL 60

Query: 234 AVAPFALIFERKIRPKMTISIFIKIMALGLIEPVIDQNLYYMGMKYTSATFASAILNIQP 413
            +APFAL+ ERK RPKMT+ IF++I ALG +EPV+DQN+YY+G++YTSATFASA +N+ P
Sbjct: 61  VIAPFALVLERKTRPKMTLPIFLRIAALGFLEPVLDQNMYYVGLQYTSATFASASINVLP 120

Query: 414 AVTFTMAIIFRLEKVKIKSIHGQAKIAGTIVSLGGAMIMTLYKGPIIDMVWS-TRENHSG 590
           A+TF MAI+FRLE+V IK +   AK+ GT +++ GAM+MTLYKGP++D++ S    +H G
Sbjct: 121 AITFIMAIVFRLERVNIKRVRDVAKVIGTCITVAGAMVMTLYKGPVLDIIRSHGAAHHKG 180

Query: 591 XXXXXXXXAQNWFVGTLMLLGSCTTWSGFFILQSITLKEYPAELSLTLLIVFMGVIQGGV 770
                    Q+W VGTL+LLGSC  WSGFFILQS TLK+YPAELSLT LI  MG ++G  
Sbjct: 181 GSEPSN---QHWIVGTLLLLGSCFGWSGFFILQSFTLKKYPAELSLTALICLMGTVEGAA 237

Query: 771 VALVMERDFSAWVIGFDSRLLAPVYSGIVGSAFAY 875
           V+L+MERD SAW IGFDSRLLA VY+G+V S  AY
Sbjct: 238 VSLIMERDMSAWKIGFDSRLLAAVYTGVVCSGCAY 272


>ref|XP_002306626.1| predicted protein [Populus trichocarpa] gi|222856075|gb|EEE93622.1|
           predicted protein [Populus trichocarpa]
          Length = 344

 Score =  323 bits (827), Expect = 4e-86
 Identities = 160/259 (61%), Positives = 194/259 (74%)
 Frame = +3

Query: 99  KVKAYLAMVTLQCGYAGMVILTMLCLNRGLNHNILVVYRNAAATIAVAPFALIFERKIRP 278
           KVK YLAMV+LQ GYAGM I+TM+ L  G++H IL VYR+  AT+ +APFA + ERKIRP
Sbjct: 3   KVKHYLAMVSLQFGYAGMYIITMVSLKHGMSHYILAVYRHVVATLVIAPFAFVLERKIRP 62

Query: 279 KMTISIFIKIMALGLIEPVIDQNLYYMGMKYTSATFASAILNIQPAVTFTMAIIFRLEKV 458
           K+T+SIF++IM LG +EPV+DQNLYY+GMKYTSATF+SA  N  PA+TF MA+ FRLE V
Sbjct: 63  KLTLSIFLRIMVLGFLEPVLDQNLYYLGMKYTSATFSSATTNALPAITFLMALCFRLETV 122

Query: 459 KIKSIHGQAKIAGTIVSLGGAMIMTLYKGPIIDMVWSTRENHSGXXXXXXXXAQNWFVGT 638
             K +H  AK  GT++++ GAM+MTLYKGP+ID + S    H G         Q+   GT
Sbjct: 123 NFKKLHSAAKAIGTVITVTGAMVMTLYKGPVIDFIRSHGAAHHGTSNESGN--QHRLTGT 180

Query: 639 LMLLGSCTTWSGFFILQSITLKEYPAELSLTLLIVFMGVIQGGVVALVMERDFSAWVIGF 818
           LMLLGSC  W+GFFILQS TLK+YPAELSLT LI  MGV++G  V+LVMERD  AW IGF
Sbjct: 181 LMLLGSCCAWAGFFILQSFTLKKYPAELSLTALICVMGVVEGAAVSLVMERDMGAWKIGF 240

Query: 819 DSRLLAPVYSGIVGSAFAY 875
           DSRLLA  YSG+V S  AY
Sbjct: 241 DSRLLAAAYSGVVCSGIAY 259


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