BLASTX nr result

ID: Coptis24_contig00018943 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018943
         (231 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39086.3| unnamed protein product [Vitis vinifera]              150   8e-35
ref|XP_002267555.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   150   8e-35
ref|XP_002450997.1| hypothetical protein SORBIDRAFT_05g022390 [S...   149   2e-34
ref|XP_002309275.1| predicted protein [Populus trichocarpa] gi|2...   149   3e-34
ref|XP_002322753.1| predicted protein [Populus trichocarpa] gi|2...   147   7e-34

>emb|CBI39086.3| unnamed protein product [Vitis vinifera]
          Length = 1116

 Score =  150 bits (380), Expect = 8e-35
 Identities = 69/77 (89%), Positives = 72/77 (93%)
 Frame = +1

Query: 1   VEDPPTSRFTWTIENFTRLNIKKHYSEVFVVGSFKWRVLVFPKGNNVDHLSMYLDVADSP 180
           VEDP TSRFTWTIENF+RLN KKHYSE+FVVG FKWRVL+FPKGNNVDHLSMYLDVADS 
Sbjct: 48  VEDPQTSRFTWTIENFSRLNTKKHYSEIFVVGGFKWRVLIFPKGNNVDHLSMYLDVADSA 107

Query: 181 NLPYGWSRYAQFSLSVV 231
            LPYGWSRYAQFSLSVV
Sbjct: 108 TLPYGWSRYAQFSLSVV 124


>ref|XP_002267555.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Vitis
           vinifera]
          Length = 1117

 Score =  150 bits (380), Expect = 8e-35
 Identities = 69/77 (89%), Positives = 72/77 (93%)
 Frame = +1

Query: 1   VEDPPTSRFTWTIENFTRLNIKKHYSEVFVVGSFKWRVLVFPKGNNVDHLSMYLDVADSP 180
           VEDP TSRFTWTIENF+RLN KKHYSE+FVVG FKWRVL+FPKGNNVDHLSMYLDVADS 
Sbjct: 48  VEDPQTSRFTWTIENFSRLNTKKHYSEIFVVGGFKWRVLIFPKGNNVDHLSMYLDVADSA 107

Query: 181 NLPYGWSRYAQFSLSVV 231
            LPYGWSRYAQFSLSVV
Sbjct: 108 TLPYGWSRYAQFSLSVV 124


>ref|XP_002450997.1| hypothetical protein SORBIDRAFT_05g022390 [Sorghum bicolor]
           gi|241936840|gb|EES09985.1| hypothetical protein
           SORBIDRAFT_05g022390 [Sorghum bicolor]
          Length = 1118

 Score =  149 bits (377), Expect = 2e-34
 Identities = 69/77 (89%), Positives = 71/77 (92%)
 Frame = +1

Query: 1   VEDPPTSRFTWTIENFTRLNIKKHYSEVFVVGSFKWRVLVFPKGNNVDHLSMYLDVADSP 180
           VEDP TSRFTWTIENFTR N KKHYSEVFVVG FKWRVL+FPKGNNVDH SMYLDVADS 
Sbjct: 51  VEDPQTSRFTWTIENFTRFNGKKHYSEVFVVGGFKWRVLIFPKGNNVDHFSMYLDVADSA 110

Query: 181 NLPYGWSRYAQFSLSVV 231
           NLPYGWSRYAQFSL+VV
Sbjct: 111 NLPYGWSRYAQFSLAVV 127


>ref|XP_002309275.1| predicted protein [Populus trichocarpa] gi|222855251|gb|EEE92798.1|
           predicted protein [Populus trichocarpa]
          Length = 1239

 Score =  149 bits (375), Expect = 3e-34
 Identities = 66/77 (85%), Positives = 73/77 (94%)
 Frame = +1

Query: 1   VEDPPTSRFTWTIENFTRLNIKKHYSEVFVVGSFKWRVLVFPKGNNVDHLSMYLDVADSP 180
           VEDPP+ +FTWTIENFTRLN KKHYS+VF+VGS+KWRVL+FPKGNNVDHLSMYLDVADS 
Sbjct: 46  VEDPPSMKFTWTIENFTRLNTKKHYSDVFIVGSYKWRVLIFPKGNNVDHLSMYLDVADST 105

Query: 181 NLPYGWSRYAQFSLSVV 231
            LPYGWSRYAQFSL+VV
Sbjct: 106 TLPYGWSRYAQFSLAVV 122


>ref|XP_002322753.1| predicted protein [Populus trichocarpa] gi|222867383|gb|EEF04514.1|
           predicted protein [Populus trichocarpa]
          Length = 1117

 Score =  147 bits (372), Expect = 7e-34
 Identities = 65/77 (84%), Positives = 73/77 (94%)
 Frame = +1

Query: 1   VEDPPTSRFTWTIENFTRLNIKKHYSEVFVVGSFKWRVLVFPKGNNVDHLSMYLDVADSP 180
           VEDPP+ +FTWTIENFTRLN KKHYS++F+VGS+KWRVL+FPKGNNVDHLSMYLDVADS 
Sbjct: 47  VEDPPSMKFTWTIENFTRLNTKKHYSDIFIVGSYKWRVLIFPKGNNVDHLSMYLDVADST 106

Query: 181 NLPYGWSRYAQFSLSVV 231
            LPYGWSRYAQFSL+VV
Sbjct: 107 ALPYGWSRYAQFSLAVV 123


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