BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018938
         (384 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325555.1| predicted protein [Populus trichocarpa] gi|2...    79   5e-13
gb|ABK94900.1| unknown [Populus trichocarpa]                           79   5e-13
ref|XP_002526817.1| 50S ribosomal protein L21, putative [Ricinus...    77   1e-12
ref|XP_002272295.1| PREDICTED: 50S ribosomal protein L21, chloro...    77   1e-12
ref|XP_002891198.1| 50S ribosomal protein L21, chloroplast [Arab...    76   3e-12

>ref|XP_002325555.1| predicted protein [Populus trichocarpa] gi|222862430|gb|EEE99936.1|
           predicted protein [Populus trichocarpa]
          Length = 206

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 38/54 (70%), Positives = 43/54 (79%)
 Frame = +3

Query: 222 QVAEFTDVETTKPEQIFAVVMIGGRQYIVFPGRFLTTQRLKGANVNDKIILNKV 383
           Q+ E    E TK E+IFAVVM+G RQYIV PGR+L  QRLKGANVNDKI+LNKV
Sbjct: 77  QIVEVAKEEPTKREEIFAVVMVGSRQYIVIPGRWLYVQRLKGANVNDKIVLNKV 130


>gb|ABK94900.1| unknown [Populus trichocarpa]
          Length = 225

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 38/54 (70%), Positives = 43/54 (79%)
 Frame = +3

Query: 222 QVAEFTDVETTKPEQIFAVVMIGGRQYIVFPGRFLTTQRLKGANVNDKIILNKV 383
           Q+ E    E TK E+IFAVVM+G RQYIV PGR+L  QRLKGANVNDKI+LNKV
Sbjct: 96  QIVEVAKEEPTKREEIFAVVMVGSRQYIVIPGRWLYVQRLKGANVNDKIVLNKV 149


>ref|XP_002526817.1| 50S ribosomal protein L21, putative [Ricinus communis]
           gi|223533821|gb|EEF35552.1| 50S ribosomal protein L21,
           putative [Ricinus communis]
          Length = 214

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 39/54 (72%), Positives = 44/54 (81%), Gaps = 2/54 (3%)
 Frame = +3

Query: 228 AEFTDV--ETTKPEQIFAVVMIGGRQYIVFPGRFLTTQRLKGANVNDKIILNKV 383
           A F +V  E TK E+IFAVVM+GGRQYIV PGRF+  QRLKGANVNDK+ LNKV
Sbjct: 85  APFVEVAKEETKREEIFAVVMVGGRQYIVIPGRFIYVQRLKGANVNDKVALNKV 138


>ref|XP_002272295.1| PREDICTED: 50S ribosomal protein L21, chloroplastic [Vitis
           vinifera] gi|297745266|emb|CBI40346.3| unnamed protein
           product [Vitis vinifera]
          Length = 209

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 39/54 (72%), Positives = 44/54 (81%)
 Frame = +3

Query: 222 QVAEFTDVETTKPEQIFAVVMIGGRQYIVFPGRFLTTQRLKGANVNDKIILNKV 383
           QV E    E  K E+IFAVVMIG RQYIVFPGR++ TQRLKGA+VNDKIILN+V
Sbjct: 80  QVVEEPPPELPKREEIFAVVMIGSRQYIVFPGRYIYTQRLKGADVNDKIILNRV 133


>ref|XP_002891198.1| 50S ribosomal protein L21, chloroplast [Arabidopsis lyrata subsp.
           lyrata] gi|297337040|gb|EFH67457.1| 50S ribosomal
           protein L21, chloroplast [Arabidopsis lyrata subsp.
           lyrata]
          Length = 215

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 38/53 (71%), Positives = 46/53 (86%)
 Frame = +3

Query: 225 VAEFTDVETTKPEQIFAVVMIGGRQYIVFPGRFLTTQRLKGANVNDKIILNKV 383
           V+E T+ E  K E+IFAVVM+GGRQYIVFPGR+L TQRLK ANV+D+I+LNKV
Sbjct: 87  VSEVTE-EKAKREEIFAVVMVGGRQYIVFPGRYLYTQRLKDANVDDQIVLNKV 138