BLASTX nr result

ID: Coptis24_contig00018934 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018934
         (349 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521188.1| RNA binding protein, putative [Ricinus commu...    64   2e-08
emb|CBI28434.3| unnamed protein product [Vitis vinifera]               62   6e-08
ref|XP_002269146.1| PREDICTED: uncharacterized protein LOC100261...    62   6e-08
ref|XP_003544309.1| PREDICTED: uncharacterized protein LOC100782...    60   2e-07
ref|XP_003518322.1| PREDICTED: uncharacterized protein LOC100813...    60   2e-07

>ref|XP_002521188.1| RNA binding protein, putative [Ricinus communis]
           gi|223539602|gb|EEF41188.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 437

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 25/27 (92%), Positives = 25/27 (92%)
 Frame = -3

Query: 167 WLCPNPSCGNSNFARRRECNKCGTPSP 87
           WLCPNPSCGN NFARR ECNKCGTPSP
Sbjct: 100 WLCPNPSCGNLNFARRVECNKCGTPSP 126


>emb|CBI28434.3| unnamed protein product [Vitis vinifera]
          Length = 873

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 24/27 (88%), Positives = 24/27 (88%)
 Frame = -3

Query: 167 WLCPNPSCGNSNFARRRECNKCGTPSP 87
           WLCPNPSCGN NFARR ECNKCG PSP
Sbjct: 622 WLCPNPSCGNLNFARRVECNKCGAPSP 648


>ref|XP_002269146.1| PREDICTED: uncharacterized protein LOC100261263 [Vitis vinifera]
          Length = 462

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 24/27 (88%), Positives = 24/27 (88%)
 Frame = -3

Query: 167 WLCPNPSCGNSNFARRRECNKCGTPSP 87
           WLCPNPSCGN NFARR ECNKCG PSP
Sbjct: 100 WLCPNPSCGNLNFARRVECNKCGAPSP 126


>ref|XP_003544309.1| PREDICTED: uncharacterized protein LOC100782124 [Glycine max]
          Length = 287

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 23/27 (85%), Positives = 23/27 (85%)
 Frame = -3

Query: 167 WLCPNPSCGNSNFARRRECNKCGTPSP 87
           W CPNPSCGN NFARR ECNKCG PSP
Sbjct: 50  WRCPNPSCGNLNFARRAECNKCGAPSP 76


>ref|XP_003518322.1| PREDICTED: uncharacterized protein LOC100813547 [Glycine max]
          Length = 404

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 23/27 (85%), Positives = 23/27 (85%)
 Frame = -3

Query: 167 WLCPNPSCGNSNFARRRECNKCGTPSP 87
           W CPNPSCGN NFARR ECNKCG PSP
Sbjct: 53  WRCPNPSCGNLNFARRAECNKCGAPSP 79


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