BLASTX nr result
ID: Coptis24_contig00018934
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00018934 (349 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002521188.1| RNA binding protein, putative [Ricinus commu... 64 2e-08 emb|CBI28434.3| unnamed protein product [Vitis vinifera] 62 6e-08 ref|XP_002269146.1| PREDICTED: uncharacterized protein LOC100261... 62 6e-08 ref|XP_003544309.1| PREDICTED: uncharacterized protein LOC100782... 60 2e-07 ref|XP_003518322.1| PREDICTED: uncharacterized protein LOC100813... 60 2e-07 >ref|XP_002521188.1| RNA binding protein, putative [Ricinus communis] gi|223539602|gb|EEF41188.1| RNA binding protein, putative [Ricinus communis] Length = 437 Score = 63.5 bits (153), Expect = 2e-08 Identities = 25/27 (92%), Positives = 25/27 (92%) Frame = -3 Query: 167 WLCPNPSCGNSNFARRRECNKCGTPSP 87 WLCPNPSCGN NFARR ECNKCGTPSP Sbjct: 100 WLCPNPSCGNLNFARRVECNKCGTPSP 126 >emb|CBI28434.3| unnamed protein product [Vitis vinifera] Length = 873 Score = 61.6 bits (148), Expect = 6e-08 Identities = 24/27 (88%), Positives = 24/27 (88%) Frame = -3 Query: 167 WLCPNPSCGNSNFARRRECNKCGTPSP 87 WLCPNPSCGN NFARR ECNKCG PSP Sbjct: 622 WLCPNPSCGNLNFARRVECNKCGAPSP 648 >ref|XP_002269146.1| PREDICTED: uncharacterized protein LOC100261263 [Vitis vinifera] Length = 462 Score = 61.6 bits (148), Expect = 6e-08 Identities = 24/27 (88%), Positives = 24/27 (88%) Frame = -3 Query: 167 WLCPNPSCGNSNFARRRECNKCGTPSP 87 WLCPNPSCGN NFARR ECNKCG PSP Sbjct: 100 WLCPNPSCGNLNFARRVECNKCGAPSP 126 >ref|XP_003544309.1| PREDICTED: uncharacterized protein LOC100782124 [Glycine max] Length = 287 Score = 60.1 bits (144), Expect = 2e-07 Identities = 23/27 (85%), Positives = 23/27 (85%) Frame = -3 Query: 167 WLCPNPSCGNSNFARRRECNKCGTPSP 87 W CPNPSCGN NFARR ECNKCG PSP Sbjct: 50 WRCPNPSCGNLNFARRAECNKCGAPSP 76 >ref|XP_003518322.1| PREDICTED: uncharacterized protein LOC100813547 [Glycine max] Length = 404 Score = 60.1 bits (144), Expect = 2e-07 Identities = 23/27 (85%), Positives = 23/27 (85%) Frame = -3 Query: 167 WLCPNPSCGNSNFARRRECNKCGTPSP 87 W CPNPSCGN NFARR ECNKCG PSP Sbjct: 53 WRCPNPSCGNLNFARRAECNKCGAPSP 79